Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 0.0e+00 1216.8 628 100.0
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.1e-68 265.4 636 35.5
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.1e-63 248.8 684 35.4
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 4.1e-63 246.9 672 33.3
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 5.4e-63 246.5 612 35.6
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 2.5e-60 237.7 638 31.7
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 2.1e-59 234.6 693 34.5
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 6.2e-59 233.0 636 34.7
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.1e-58 232.3 638 34.2
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.8e-58 231.5 731 31.2
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.2e-57 228.8 692 34.2
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 1.2e-57 228.8 667 32.5
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 2.6e-57 227.6 693 31.6
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 2.6e-57 227.6 692 34.1
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 3.4e-57 227.3 720 32.8
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 4.4e-57 226.9 731 33.9
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 9.8e-57 225.7 675 32.3
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 2.9e-56 224.2 718 31.5
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 3.7e-56 223.8 703 31.7
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 3.7e-56 223.8 696 32.0
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 8.3e-56 222.6 663 35.0
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.9e-55 221.5 684 31.9
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 3.2e-55 220.7 643 33.6
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 4.1e-55 220.3 635 34.0
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 7.1e-55 219.5 711 32.2
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 3.5e-54 217.2 637 33.9
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 4.6e-54 216.9 680 32.8
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.0e-53 215.7 627 33.0
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 1.7e-53 214.9 732 30.5
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.7e-53 214.9 723 31.0
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 3.9e-53 213.8 662 32.3
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 1.1e-52 212.2 687 30.4
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.1e-52 212.2 659 32.8
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 3.3e-52 210.7 676 32.4
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 7.3e-52 209.5 642 31.9
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 7.3e-52 209.5 723 31.4
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 2.1e-51 208.0 745 30.9
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 6.2e-51 206.5 642 32.4
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 8.1e-51 206.1 674 32.2
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 1.1e-50 205.7 715 30.6
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 1.4e-50 205.3 691 31.5
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 5.2e-50 203.4 651 33.2
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 8.9e-50 202.6 744 30.5
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.5e-49 201.8 611 32.1
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 4.4e-49 200.3 664 31.8
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 4.4e-49 200.3 663 30.8
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 5.8e-49 199.9 636 30.8
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.3e-48 198.7 661 31.9
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 2.2e-48 198.0 672 31.2
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.2e-48 198.0 673 30.0
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 4.9e-48 196.8 675 29.6
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 6.4e-48 196.4 671 32.6
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.4e-47 195.3 669 31.8
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 5.4e-47 193.4 726 31.0
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 9.2e-47 192.6 665 31.1
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.2e-46 192.2 373 39.4
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 2.7e-46 191.0 636 29.9
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 3.5e-46 190.7 623 32.1
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 7.8e-46 189.5 634 31.1
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 7.8e-46 189.5 751 29.7
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 5.1e-45 186.8 690 29.4
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 8.6e-45 186.0 700 30.9
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.5e-44 185.3 610 33.4
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 2.5e-44 184.5 662 29.0
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 4.3e-44 183.7 671 30.1
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.6e-43 181.8 688 28.6
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 2.1e-43 181.4 764 28.9
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 6.2e-43 179.9 633 29.1
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 6.2e-43 179.9 764 28.9
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 1.8e-42 178.3 643 28.8
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 3.1e-42 177.6 725 28.3
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 6.8e-42 176.4 353 40.2
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 8.9e-42 176.0 661 31.0
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 1.2e-41 175.6 536 33.6
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 5.8e-41 173.3 628 30.6
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 5.8e-41 173.3 628 30.6
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 5.8e-41 173.3 628 30.6
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 5.8e-41 173.3 710 28.2
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 7.6e-41 172.9 625 30.9
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 9.9e-41 172.6 640 31.7
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 3.8e-40 170.6 342 38.9
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.9e-40 170.2 654 31.2
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 6.4e-40 169.9 656 29.6
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 6.4e-40 169.9 671 28.0
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 5.4e-39 166.8 640 29.8
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 7.1e-39 166.4 327 41.0
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 1.6e-38 165.2 635 28.3
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 2.1e-38 164.9 625 30.1
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.1e-38 164.9 227 47.1
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 2.7e-38 164.5 643 30.2
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 3.5e-38 164.1 616 31.2
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 7.8e-38 162.9 591 31.5
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.0e-37 161.0 189 49.2
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 1.5e-36 158.7 468 31.8
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.1e-35 154.8 208 46.2
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 4.8e-35 153.7 632 28.2
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 6.2e-35 153.3 604 30.1
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 6.9e-34 149.8 632 27.2
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 7.6e-33 146.4 723 28.9
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 1.7e-32 145.2 204 44.6
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.8e-32 144.1 602 30.2
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.1e-31 142.5 616 27.4
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 5.3e-26 123.6 124 55.6
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 5.8e-25 120.2 128 54.7
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 4.9e-24 117.1 184 40.2
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 6.4e-24 116.7 442 31.2
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 3.2e-23 114.4 132 51.5
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 7.1e-23 113.2 589 26.8
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.7e-22 111.3 206 40.8
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 1.0e-21 109.4 245 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 1.5e-20 105.5 269 32.3
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 1.6e-19 102.1 73 65.8
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 1.8e-18 98.6 358 30.2
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 6.9e-18 96.7 368 29.9
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 1.2e-17 95.9 357 30.0
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.5e-15 88.2 318 30.2
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 9.3e-15 86.3 378 28.8
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 2.3e-13 81.6 162 37.7
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 2.4e-10 71.6 151 39.1
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 4.5e-09 67.4 78 46.2
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 3.8e-08 64.3 247 34.0
Cre04.g227750 Chlamydomonas reinhardtii HOM05D006280 ORTHO05D139168 4.6e-06 57.4 126 30.2


User provided reference genes

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