Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 1.6e-292 1009.2 755 100.0
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 7.3e-115 419.1 670 69.4
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 2.1e-114 417.5 682 57.5
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 4.7e-114 416.4 749 64.8
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.2e-112 411.8 445 59.6
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 5.8e-112 409.5 367 55.9
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 2.1e-109 401.0 624 68.6
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 2.1e-109 401.0 384 63.3
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.7e-109 400.6 367 66.5
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 2.3e-108 397.5 684 57.3
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 5.1e-108 396.4 368 66.0
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 6.6e-108 396.0 647 57.0
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 1.9e-107 394.4 680 67.9
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 4.3e-107 393.3 681 67.5
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 5.6e-107 392.9 447 48.3
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 8.1e-106 389.0 505 55.8
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 8.1e-106 389.0 446 57.0
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 4.0e-105 386.7 439 54.0
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 8.9e-105 385.6 447 49.0
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 1.5e-104 384.8 461 56.0
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 1.7e-103 381.3 677 64.7
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 2.2e-103 380.9 444 56.5
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 2.9e-103 380.6 352 65.1
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 3.8e-103 380.2 629 65.5
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 8.4e-103 379.0 465 57.2
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 1.1e-102 378.6 616 65.9
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 1.4e-102 378.3 445 56.9
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 1.9e-102 377.9 443 55.5
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.4e-102 377.5 352 66.8
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 5.4e-102 376.3 444 58.1
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 5.4e-102 376.3 444 58.1
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 7.1e-102 375.9 367 66.8
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 9.2e-102 375.6 449 54.8
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 9.2e-102 375.6 462 54.8
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 1.2e-101 375.2 380 63.7
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.6e-101 374.8 439 56.7
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 2.1e-101 374.4 461 54.9
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.7e-101 374.0 367 52.3
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 2.7e-101 374.0 417 59.5
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 4.6e-101 373.2 686 65.0
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.0e-100 372.1 627 69.9
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.3e-100 371.7 390 63.1
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.7e-100 371.3 513 49.5
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.3e-100 370.9 439 54.0
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.3e-100 370.9 362 63.3
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.3e-100 370.9 389 57.6
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 5.1e-100 369.8 403 61.0
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 5.1e-100 369.8 377 64.5
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 6.6e-100 369.4 386 63.5
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 8.7e-100 369.0 447 57.3
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 1.9e-99 367.9 719 61.6
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 3.3e-99 367.1 408 59.6
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.3e-99 366.7 353 63.2
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 9.6e-99 365.5 379 64.4
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.2e-98 365.2 452 56.2
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 2.1e-98 364.4 451 56.8
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 8.1e-98 362.5 383 63.2
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.8e-97 361.3 442 55.9
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 6.9e-97 359.4 391 58.8
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.0e-96 357.8 380 61.3
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 2.6e-96 357.5 485 43.9
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 3.4e-96 357.1 353 62.3
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 7.6e-96 355.9 481 53.6
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 2.2e-95 354.4 317 67.5
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.8e-95 353.6 384 59.1
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 4.9e-95 353.2 446 54.9
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 8.4e-95 352.4 447 56.6
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 8.4e-95 352.4 380 60.8
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 1.1e-94 352.1 449 56.3
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 1.1e-94 352.1 347 63.4
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 9.3e-94 349.0 442 55.9
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 6.0e-93 346.3 326 66.3
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.0e-92 345.5 411 57.2
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.3e-92 345.1 353 62.0
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 8.7e-92 342.4 400 59.0
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 1.9e-91 341.3 616 66.1
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 2.5e-91 340.9 367 62.1
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 4.3e-91 340.1 382 57.1
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 5.6e-91 339.7 408 58.1
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 7.3e-91 339.3 408 57.8
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 7.3e-91 339.3 408 57.8
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.6e-90 338.2 479 51.6
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 8.1e-90 335.9 367 61.6
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 8.1e-90 335.9 469 54.2
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.4e-89 335.1 415 55.4
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 1.4e-89 335.1 352 61.9
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 1.8e-89 334.7 417 56.1
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 4.0e-89 333.6 474 50.8
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 9.0e-89 332.4 363 60.1
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 9.0e-89 332.4 388 55.7
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 9.9e-88 328.9 427 53.4
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 2.2e-87 327.8 438 53.2
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.9e-87 327.4 445 55.5
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 8.4e-87 325.9 303 67.0
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.1e-85 321.2 325 64.6
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 1.0e-84 318.9 317 63.1
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 2.3e-84 317.8 438 50.7
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 5.1e-84 316.6 356 59.0
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 3.3e-83 313.9 343 59.2
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.1e-82 309.3 462 49.4
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.1e-82 309.3 462 49.4
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 1.3e-63 248.8 188 61.2
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 2.5e-62 244.6 359 42.9
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 2.0e-56 224.9 520 40.2
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 6.5e-47 193.4 258 42.2
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 5.2e-44 183.7 282 38.3
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 1.3e-42 179.1 378 38.1
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 6.3e-42 176.8 386 40.7
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 5.7e-27 127.1 429 36.4
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 5.5e-22 110.5 231 51.1
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 2.8e-18 98.2 159 31.4
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 2.5e-14 85.1 128 35.9
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 6.8e-12 77.0 47 66.0
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 7.8e-08 63.5 76 46.1
FvH4_1g14410 Fragaria vesca HOM05D000001 ORTHO05D000003 4.3e-06 57.8 132 25.8
CsaV3_6G016640 Cucumis sativus L. HOM05D000001 ORTHO05D009726 9.5e-06 56.6 151 25.2


User provided reference genes

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