Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0824G193 Amborella trichopoda HOM05D000885 ORTHO05D008996 7.7e-65 250.4 129 100.0
TAR371G0994 Trochodendron aralioides HOM05D000885 ORTHO05D008996 7.3e-23 110.9 132 52.3
Nn4g22584 Nelumbo nucifera HOM05D000885 ORTHO05D008996 2.1e-22 109.4 131 53.4
TAR629G0635 Trochodendron aralioides HOM05D000885 ORTHO05D008996 2.3e-21 105.9 132 52.3
TAR622G0608 Trochodendron aralioides HOM05D000885 ORTHO05D008996 1.2e-20 103.6 132 50.8
Nn3g16685 Nelumbo nucifera HOM05D006734 ORTHO05D008580 4.9e-19 98.2 94 59.6
Aqoxy3G01240 Aquilegia oxysepala HOM05D000885 ORTHO05D008996 9.2e-18 94.0 131 45.0
MBI10_g11212_MAGBIO Magnolia biondii HOM05D000885 ORTHO05D008996 1.6e-17 93.2 133 46.6
Actinidia19363 Actinidia chinensis HOM05D000885 ORTHO05D008996 2.0e-17 92.8 130 46.9
Cc00_g26390 Coffea canephora HOM05D000885 ORTHO05D008996 2.0e-17 92.8 130 42.3
Rhsim08G0178100 Rhododendron simsii HOM05D000885 ORTHO05D008996 2.7e-17 92.4 130 43.1
PSO754G0088 Papaver somniferum HOM05D000885 ORTHO05D008996 4.6e-17 91.7 133 47.4
Actinidia16220 Actinidia chinensis HOM05D000885 ORTHO05D008996 5.9e-17 91.3 130 43.8
Hma1.2p1_1092F.1_g255950 Hydrangea macrophylla HOM05D000885 ORTHO05D008996 5.9e-17 91.3 133 44.4
Dinv20596 Davidia involucrata HOM05D000885 ORTHO05D008996 7.8e-17 90.9 131 45.8
PSO063G6095 Papaver somniferum HOM05D000885 ORTHO05D008996 2.3e-16 89.4 133 45.9
GSVIVG01007639001 Vitis vinifera HOM05D000885 ORTHO05D008996 3.0e-16 89.0 130 48.5
DCAR_026175 Daucus carota HOM05D000885 ORTHO05D008996 2.5e-15 85.9 130 45.4
Dinv38523 Davidia involucrata HOM05D000885 ORTHO05D008996 2.5e-15 85.9 130 43.8
CSS0019047 Camellia sinensis var. sinensis HOM05D000885 ORTHO05D008996 1.6e-14 83.2 91 53.8
Atru.chr9.2584 Acer truncatum HOM05D000885 ORTHO05D008996 1.8e-13 79.7 130 43.8
MBI18_g22703_MAGBIO Magnolia biondii HOM05D000885 ORTHO05D008996 1.8e-13 79.7 104 48.1
vmacro19293 Vaccinium macrocarpon HOM05D000885 ORTHO05D008996 1.8e-13 79.7 71 56.3
MSTRG.23169 Avicennia marina HOM05D000885 ORTHO05D008996 3.4e-12 75.5 131 42.0
Migut.O00162 Erythranthe guttata HOM05D000885 ORTHO05D008996 1.3e-11 73.6 130 41.5
Potri.012G086500 Populus trichocarpa HOM05D000885 ORTHO05D008996 1.7e-11 73.2 129 41.1
Sopen06g028070 Solanum pennellii HOM05D000885 ORTHO05D008996 1.7e-11 73.2 138 38.4
Manes.06G110900 Manihot esculenta HOM05D000885 ORTHO05D008996 2.2e-11 72.8 130 42.3
Lj9C442T3 Lonicera japonica HOM05D000885 ORTHO05D008996 2.9e-11 72.4 135 45.2
Manes.14G060400 Manihot esculenta HOM05D000885 ORTHO05D008996 3.7e-11 72.0 130 42.3
SalBow5G1579 Salvia bowleyana HOM05D000885 ORTHO05D008996 3.7e-11 72.0 128 39.8
CAN.G993.19 Capsicum annuum HOM05D000885 ORTHO05D008996 8.3e-11 70.9 131 38.2
Solyc06g071780.4 Solanum lycopersicum HOM05D000885 ORTHO05D008996 1.1e-10 70.5 131 38.9
PGSC0003DMG400018127 Solanum tuberosum HOM05D000885 ORTHO05D008996 1.1e-10 70.5 132 39.4
Solyc03g112160.3 Solanum lycopersicum HOM05D000885 ORTHO05D008996 1.4e-10 70.1 134 38.1
Nitab4.5_0002522g0010 Nicotiana tabacum HOM05D000885 ORTHO05D008996 2.4e-10 69.3 128 35.9
CAN.G338.44 Capsicum annuum HOM05D000885 ORTHO05D008996 3.2e-10 68.9 132 36.4
MD14G1171000 Malus domestica HOM05D000885 ORTHO05D008996 3.2e-10 68.9 129 41.9
PGSC0003DMG400027072 Solanum tuberosum HOM05D000885 ORTHO05D008996 3.2e-10 68.9 138 38.4
Thecc.03G026300 Theobroma cacao HOM05D000885 ORTHO05D008996 3.2e-10 68.9 132 42.4
Prupe.5G165100 Prunus persica HOM05D000885 ORTHO05D008996 5.4e-10 68.2 133 39.8
Nitab4.5_0008913g0040 Nicotiana tabacum HOM05D000885 ORTHO05D008996 7.0e-10 67.8 130 36.9
Manes.08G113400 Manihot esculenta HOM05D000885 ORTHO05D001238 1.2e-09 67.0 136 39.0
Peaxi162Scf00089g01332 Petunia axillaris HOM05D000885 ORTHO05D008996 1.2e-09 67.0 129 38.0
Peaxi162Scf00763g00438 Petunia axillaris HOM05D000885 ORTHO05D008996 2.0e-09 66.2 132 38.6
MD06G1165500 Malus domestica HOM05D000885 ORTHO05D008996 3.5e-09 65.5 129 39.5
SEGI_02896 Sequoiadendron giganteum HOM05D000885 ORTHO05D001238 1.0e-08 63.9 140 38.6
Nn3g21592 Nelumbo nucifera HOM05D000885 ORTHO05D001238 1.3e-08 63.5 138 40.6
TWI14G0880 Tripterygium wilfordii HOM05D000885 ORTHO05D008996 1.3e-08 63.5 132 43.9
HPP92_023366 Vanilla planifolia HOM05D000885 ORTHO05D008996 1.7e-08 63.2 131 35.9
Potri.005G020900 Populus trichocarpa HOM05D000885 ORTHO05D001238 2.3e-08 62.8 136 39.7
RcHm_v2.0_Chr7g0192501 Rosa chinensis HOM05D000885 ORTHO05D008996 2.3e-08 62.8 129 40.3
Duzib205G1010 Durio zibethinus HOM05D000885 ORTHO05D008996 3.0e-08 62.4 129 41.9
Medtr1g083780 Medicago truncatula HOM05D000885 ORTHO05D001238 5.0e-08 61.6 134 38.1
Cpa.g.sc159.15 Carica papaya HOM05D000885 ORTHO05D008996 6.6e-08 61.2 130 37.7
CANSAT80G2717 Cannabis sativa HOM05D000885 ORTHO05D008996 8.6e-08 60.8 127 37.0
Cfa019224 Carpinus fangiana HOM05D000885 ORTHO05D008996 8.6e-08 60.8 131 35.9
Duzib128G0854 Durio zibethinus HOM05D000885 ORTHO05D001238 1.1e-07 60.5 139 37.4
Gorai.007G303800 Gossypium raimondii HOM05D000885 ORTHO05D001238 1.1e-07 60.5 135 35.6
Oeu036500.2 Olea europaea HOM05D000885 ORTHO05D008996 1.1e-07 60.5 95 43.2
Os01g0971100 Oryza sativa ssp. japonica HOM05D000885 ORTHO05D008996 1.1e-07 60.5 130 31.5
DCAR_005410 Daucus carota HOM05D000885 ORTHO05D001238 1.5e-07 60.1 136 38.2
Nitab4.5_0000003g0830 Nicotiana tabacum HOM05D000885 ORTHO05D008996 1.5e-07 60.1 132 34.8
Eucgr.H03279 Eucalyptus grandis HOM05D000885 ORTHO05D001238 1.9e-07 59.7 136 36.8
Gohir.D11G281400 Gossypium hirsutum HOM05D000885 ORTHO05D001238 1.9e-07 59.7 134 35.8
Nitab4.5_0008713g0010 Nicotiana tabacum HOM05D000885 ORTHO05D008996 1.9e-07 59.7 130 34.6
CiPaw.11G019200 Carya illinoinensis HOM05D000885 ORTHO05D008996 2.5e-07 59.3 133 35.3
Gohir.A11G271200 Gossypium hirsutum HOM05D000885 ORTHO05D001238 3.3e-07 58.9 137 34.3
Gohir.D13G180800 Gossypium hirsutum HOM05D000885 ORTHO05D001238 3.3e-07 58.9 135 36.3
Nn4g25691 Nelumbo nucifera HOM05D000885 ORTHO05D001238 3.3e-07 58.9 136 39.0
MSTRG.11498 Avicennia marina HOM05D000885 ORTHO05D008996 4.3e-07 58.5 130 36.2
CiPaw.12G031400 Carya illinoinensis HOM05D000885 ORTHO05D008996 4.3e-07 58.5 129 36.4
Haze_07592 Corylus avellana HOM05D000885 ORTHO05D008996 4.3e-07 58.5 131 35.1
Gohir.A13G174900 Gossypium hirsutum HOM05D000885 ORTHO05D001238 4.3e-07 58.5 135 36.3
Eucgr.K02787 Eucalyptus grandis HOM05D000885 ORTHO05D008996 5.6e-07 58.2 129 35.7
Oeu020883.2 Olea europaea HOM05D000885 ORTHO05D008996 9.5e-07 57.4 81 42.0
Gohir.D08G223900 Gossypium hirsutum HOM05D000885 ORTHO05D001238 1.2e-06 57.0 139 37.4
Thecc.05G319300 Theobroma cacao HOM05D000885 ORTHO05D001238 1.2e-06 57.0 138 38.4
Gohir.A08G207300 Gossypium hirsutum HOM05D000885 ORTHO05D001238 1.6e-06 56.6 139 37.4
Aqoxy2G02848_Aqoxy2G02849 Aquilegia oxysepala HOM05D000885 ORTHO05D001238 2.1e-06 56.2 134 33.6
Peaxi162Scf00065g00514 Petunia axillaris HOM05D000885 ORTHO05D001238 2.1e-06 56.2 150 32.7
Sabra12G0061900 Salix brachista HOM05D000885 ORTHO05D008996 2.1e-06 56.2 117 37.6
Glyma.15G145400 Glycine max HOM05D000885 ORTHO05D001238 2.8e-06 55.8 133 38.3
Gorai.013G206300 Gossypium raimondii HOM05D000885 ORTHO05D001238 2.8e-06 55.8 135 35.6
Sopen03g031250 Solanum pennellii HOM05D000885 ORTHO05D008996 2.8e-06 55.8 98 36.7
THA.LOC104821733 Tarenaya hassleriana HOM05D000885 ORTHO05D001238 2.8e-06 55.8 139 36.7
Hma1.2p1_0472F.1_g159800 Hydrangea macrophylla HOM05D000885 ORTHO05D001238 3.6e-06 55.5 136 35.3
MBI19_g38158_MAGBIO Magnolia biondii HOM05D000885 ORTHO05D001238 3.6e-06 55.5 117 35.9
Manes.15G007500 Manihot esculenta HOM05D000885 ORTHO05D001238 3.6e-06 55.5 135 35.6
FvH4_4g19190 Fragaria vesca HOM05D000885 ORTHO05D001238 4.7e-06 55.1 135 36.3
MD02G1231100 Malus domestica HOM05D000885 ORTHO05D008996 4.7e-06 55.1 71 45.1
Sabra05G0026900 Salix brachista HOM05D000885 ORTHO05D001238 4.7e-06 55.1 163 31.9
Ciclev10022143m.g Citrus clementina HOM05D000885 ORTHO05D008996 6.2e-06 54.7 71 49.3
Thecc.04G293800 Theobroma cacao HOM05D000885 ORTHO05D001238 6.2e-06 54.7 136 36.8
Os05g0107900 Oryza sativa ssp. japonica HOM05D000885 ORTHO05D008996 8.1e-06 54.3 127 33.9
Solyc01g065550.3 Solanum lycopersicum HOM05D000885 ORTHO05D001238 8.1e-06 54.3 136 33.8


User provided reference genes

Program Settings