Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G284 Amborella trichopoda HOM05D004262 ORTHO05D004886 1.9e-209 732.3 377 100.0
TAR250G0005 Trochodendron aralioides HOM05D004262 ORTHO05D004886 3.1e-50 203.4 401 39.2
Dinv12126 Davidia involucrata HOM05D004262 ORTHO05D004886 2.7e-49 200.3 400 38.0
Actinidia09812 Actinidia chinensis HOM05D004262 ORTHO05D004886 4.5e-49 199.5 400 38.5
Dinv15095 Davidia involucrata HOM05D004262 ORTHO05D004886 2.9e-48 196.8 399 39.6
TAR625G1293 Trochodendron aralioides HOM05D004262 ORTHO05D004886 3.8e-48 196.4 396 39.6
Cfa002810 Carpinus fangiana HOM05D004262 ORTHO05D004886 5.5e-47 192.6 396 35.9
CiPaw.04G086800 Carya illinoinensis HOM05D004262 ORTHO05D004886 1.6e-46 191.0 394 36.8
QL06p030897 Quercus lobata HOM05D004262 ORTHO05D004886 2.1e-46 190.7 397 37.8
Rhsim10G0142400 Rhododendron simsii HOM05D004262 ORTHO05D004886 2.8e-46 190.3 401 38.4
CSS0008059 Camellia sinensis var. sinensis HOM05D004262 ORTHO05D004886 1.4e-45 188.0 401 36.9
Thecc.01G119500 Theobroma cacao HOM05D004262 ORTHO05D004886 1.4e-45 188.0 397 35.5
Ciclev10024792m.g Citrus clementina HOM05D004262 ORTHO05D004886 4.0e-45 186.4 407 36.1
TAR381G1254 Trochodendron aralioides HOM05D004262 ORTHO05D004886 5.2e-45 186.0 400 37.5
CiPaw.04G087100 Carya illinoinensis HOM05D004262 ORTHO05D004886 2.0e-44 184.1 394 37.1
Duzib147G0824 Durio zibethinus HOM05D004262 ORTHO05D004886 2.6e-44 183.7 394 34.8
MD01G1017000 Malus domestica HOM05D004262 ORTHO05D004886 1.3e-43 181.4 406 35.7
CsaV3_2G018000 Cucumis sativus L. HOM05D004262 ORTHO05D004886 6.3e-43 179.1 387 35.9
Sabra19G0004000 Salix brachista HOM05D004262 ORTHO05D004886 1.4e-42 177.9 399 35.6
Sabra19G0021500 Salix brachista HOM05D004262 ORTHO05D004886 1.4e-42 177.9 399 35.6
vmacro12820 Vaccinium macrocarpon HOM05D004262 ORTHO05D004886 2.4e-42 177.2 400 35.8
Prupe.7G207600 Prunus persica HOM05D004262 ORTHO05D004886 3.1e-42 176.8 403 38.2
COL.COLO4_22393 Corchorus olitorius HOM05D000258 ORTHO05D000153 9.2e-42 175.3 390 34.9
EL10Ac6g15245 Beta vulgaris HOM05D004262 ORTHO05D004886 2.0e-41 174.1 387 34.1
Gohir.A11G223950 Gossypium hirsutum HOM05D004262 ORTHO05D004886 2.7e-41 173.7 399 34.1
CANSAT01G2046 Cannabis sativa HOM05D004262 ORTHO05D004886 3.5e-41 173.3 386 36.5
Sc16g0004000 Simmondsia chinensis HOM05D004262 ORTHO05D004886 4.5e-41 172.9 403 35.2
Nn5g28756 Nelumbo nucifera HOM05D004262 ORTHO05D004886 5.9e-41 172.6 401 34.7
Sed0013193 Sechium edule HOM05D004262 ORTHO05D004886 5.9e-41 172.6 405 33.8
Potri.001G307700 Populus trichocarpa HOM05D004262 ORTHO05D004886 1.0e-40 171.8 398 33.9
Sabra16G0193600 Salix brachista HOM05D004262 ORTHO05D004886 1.0e-40 171.8 378 33.6
Nitab4.5_0004021g0030 Nicotiana tabacum HOM05D004262 ORTHO05D004886 1.3e-40 171.4 396 32.3
Cpa.g.sc72.29 Carica papaya HOM05D004262 ORTHO05D004886 1.7e-40 171.0 397 35.3
ClCG02G000740 Citrullus lanatus HOM05D004262 ORTHO05D004886 1.7e-40 171.0 389 33.7
Gohir.D11G226360 Gossypium hirsutum HOM05D004262 ORTHO05D004886 1.7e-40 171.0 397 34.3
Gorai.002G150600 Gossypium raimondii HOM05D004262 ORTHO05D004886 2.3e-40 170.6 397 34.3
Aqoxy5G02078 Aquilegia oxysepala HOM05D004262 ORTHO05D004886 2.9e-40 170.2 401 33.7
Oeu064303.1 Olea europaea HOM05D004262 ORTHO05D004886 5.0e-40 169.5 378 34.9
Nitab4.5_0001582g0040 Nicotiana tabacum HOM05D004262 ORTHO05D004886 6.6e-40 169.1 396 32.3
Oeu002630.1 Olea europaea HOM05D004262 ORTHO05D004886 6.6e-40 169.1 395 33.7
Lalb_Chr08g0238681 Lupinus albus HOM05D004262 ORTHO05D004886 8.6e-40 168.7 398 33.7
COL.COLO4_23999 Corchorus olitorius HOM05D000145 ORTHO05D004886 1.1e-39 168.3 403 33.0
Solyc11g005440.2 Solanum lycopersicum HOM05D004262 ORTHO05D004886 1.1e-39 168.3 392 31.4
AUR62017940 Chenopodium quinoa HOM05D004262 ORTHO05D004886 1.5e-39 167.9 400 32.2
Sopen11g001450 Solanum pennellii HOM05D004262 ORTHO05D004886 1.5e-39 167.9 394 32.0
CAN.G516.2 Capsicum annuum HOM05D004262 ORTHO05D004886 1.9e-39 167.5 391 32.2
Ca_16911_v3 Cicer arietinum L. HOM05D004262 ORTHO05D004886 1.9e-39 167.5 401 32.9
AUR62003631 Chenopodium quinoa HOM05D004262 ORTHO05D004886 4.3e-39 166.4 399 31.8
Cc07_g17550 Coffea canephora HOM05D004262 ORTHO05D004886 5.6e-39 166.0 402 33.8
Psat5g062600 Pisum sativum HOM05D004262 ORTHO05D004886 7.3e-39 165.6 401 33.7
Lj1g0022256 Lotus japonicus HOM05D004262 ORTHO05D004886 9.5e-39 165.2 399 31.1
GSVIVG01026616001 Vitis vinifera HOM05D004262 ORTHO05D004886 9.5e-39 165.2 381 34.9
TWI31G0151 Tripterygium wilfordii HOM05D004262 ORTHO05D004886 1.2e-38 164.9 413 33.7
CDE06G2757 Ceratophyllum demersum HOM05D004262 ORTHO05D004886 2.1e-38 164.1 300 37.7
PGSC0003DMG400003967 Solanum tuberosum HOM05D004262 ORTHO05D004886 3.6e-38 163.3 394 31.5
Potri.019G004000 Populus trichocarpa HOM05D004262 ORTHO05D004886 4.7e-38 162.9 402 34.6
MELO3C023273.2 Cucumis melo HOM05D004262 ORTHO05D004886 1.4e-37 161.4 390 33.3
DCAR_014352 Daucus carota HOM05D004262 ORTHO05D004886 1.7e-35 154.5 398 32.9
Zm00001eb139430 Zea mays HOM05D004262 ORTHO05D004886 4.9e-35 152.9 372 32.0
Lj2A589G33 Lonicera japonica HOM05D004262 ORTHO05D004886 6.4e-35 152.5 393 34.4
Ah.02g122290 Amaranthus hybridus HOM05D004262 ORTHO05D004886 5.4e-34 149.4 384 33.9
arahy.Tifrunner.gnm1.ann1.3RI1TB Arachis hypogaea HOM05D004262 ORTHO05D004886 5.4e-34 149.4 403 30.3
Os12g0162900 Oryza sativa ssp. japonica HOM05D004262 ORTHO05D004886 7.0e-34 149.1 377 32.4
VMungo0022G0001 Vigna mungo HOM05D004262 ORTHO05D004886 9.2e-34 148.7 392 31.9
Migut.H02473 Erythranthe guttata HOM05D004262 ORTHO05D004886 2.7e-33 147.1 388 33.8
HanXRQChr10g0296711 Helianthus annuus HOM05D004262 ORTHO05D004886 2.3e-32 144.1 379 32.2
arahy.Tifrunner.gnm1.ann1.H08UBS Arachis hypogaea HOM05D004262 ORTHO05D004886 3.0e-32 143.7 403 30.8
Manes.13G082100 Manihot esculenta HOM05D004262 ORTHO05D004886 1.9e-31 141.0 402 33.1
MSTRG.23288 Avicennia marina HOM05D004262 ORTHO05D004886 2.5e-31 140.6 404 31.2
Glyma.17G127700 Glycine max HOM05D004262 ORTHO05D004886 2.5e-31 140.6 443 29.1
Hund19612 Selenicereus undatus HOM05D004262 ORTHO05D004886 2.5e-31 140.6 371 34.0
Medtr3g095410 Medicago truncatula HOM05D004262 ORTHO05D004886 2.8e-30 137.1 411 29.7
RcHm_v2.0_Chr2g0119261 Rosa chinensis HOM05D004262 ORTHO05D004886 6.2e-30 136.0 382 34.3
SalBow8G4827 Salvia bowleyana HOM05D004262 ORTHO05D004886 8.0e-30 135.6 392 28.6
Lsat_1_v5_gn_5_101740 Lactuca sativa HOM05D004262 ORTHO05D004886 1.8e-29 134.4 371 31.0
FvH4_1g23660 Fragaria vesca HOM05D004262 ORTHO05D004886 2.3e-29 134.0 396 34.3
FAN26G0764 Fragaria x ananassa HOM05D004262 ORTHO05D004886 2.3e-29 134.0 396 33.8
Glyma.04G216400 Glycine max HOM05D004262 ORTHO05D004886 2.3e-29 134.0 327 31.8
Glyma.05G045500 Glycine max HOM05D004262 ORTHO05D004886 2.3e-29 134.0 441 27.4
FAN28G2830 Fragaria x ananassa HOM05D004262 ORTHO05D004886 3.1e-29 133.7 396 33.3
Peaxi162Scf00025g02620 Petunia axillaris HOM05D004262 ORTHO05D004886 5.2e-29 132.9 390 30.8
Phvul.003G208800 Phaseolus vulgaris HOM05D004262 ORTHO05D004886 5.2e-29 132.9 449 28.3
FAN19G0674 Fragaria x ananassa HOM05D004262 ORTHO05D004886 1.2e-28 131.7 396 32.6
Hund03495 Selenicereus undatus HOM05D004262 ORTHO05D004886 1.3e-27 128.3 320 32.2
SGA_v2.0_scaffold2G01256 Striga asiatica HOM05D004262 ORTHO05D004886 1.3e-27 128.3 381 32.5
PSO675G0841 Papaver somniferum HOM05D004262 ORTHO05D004886 1.7e-27 127.9 398 30.4
FAN23G1672 Fragaria x ananassa HOM05D004262 ORTHO05D004886 3.7e-27 126.7 403 31.5
TPR.G18728 Trifolium pratense HOM05D004262 ORTHO05D004886 1.2e-25 121.7 192 38.5
DCAR_001416 Daucus carota HOM05D004262 ORTHO05D004886 1.6e-25 121.3 356 31.2
THA.LOC104799402 Tarenaya hassleriana HOM05D004262 ORTHO05D004886 2.0e-25 120.9 393 29.3
HPP92_002646 Vanilla planifolia HOM05D004262 ORTHO05D004886 2.7e-25 120.6 452 27.4
Lj4C857T4 Lonicera japonica HOM05D004262 ORTHO05D004886 3.5e-25 120.2 441 31.3
ECA234G3594 Erigeron canadensis HOM05D004262 ORTHO05D004886 4.6e-25 119.8 373 29.5
PGR119G1219 Punica granatum HOM05D004262 ORTHO05D004886 1.0e-24 118.6 379 30.1
Duzib187G1764 Durio zibethinus HOM05D004262 ORTHO05D004886 1.1e-23 115.2 236 33.9
Sed0020078 Sechium edule HOM05D004262 ORTHO05D004886 3.4e-20 103.6 132 42.4
Aa31LG1G17200 Aethionema arabicum HOM05D004262 ORTHO05D004886 2.2e-19 100.9 216 31.9
THA.LOC104818467 Tarenaya hassleriana HOM05D004262 ORTHO05D004886 1.4e-18 98.2 359 28.4
A02p43420 Brassica napus HOM05D004262 ORTHO05D004886 1.9e-18 97.8 191 31.4
A10p27620 Brassica napus HOM05D004262 ORTHO05D004886 1.9e-18 97.8 310 29.4
BraA10t44814Z Brassica rapa HOM05D004262 ORTHO05D004886 1.9e-18 97.8 310 29.4
Aa31LG3G17280 Aethionema arabicum HOM05D004262 ORTHO05D004886 3.2e-18 97.1 369 26.8
BraA02t09267Z Brassica rapa HOM05D004262 ORTHO05D004886 2.1e-17 94.4 216 28.7
BcaC03g18272 Brassica carinata HOM05D004262 ORTHO05D004886 3.5e-17 93.6 193 30.1
C09p67680 Brassica napus HOM05D004262 ORTHO05D004886 3.5e-17 93.6 313 29.1
BolC2t12417H Brassica oleracea HOM05D004262 ORTHO05D004886 3.5e-17 93.6 193 30.1
BolC9t59530H Brassica oleracea HOM05D004262 ORTHO05D004886 3.5e-17 93.6 313 28.8
Sp2g27780 Schrenkiella parvula HOM05D004262 ORTHO05D004886 3.5e-17 93.6 161 37.3
CARHR278700 Cardamine hirsuta HOM05D004262 ORTHO05D004886 6.0e-17 92.8 172 33.7
Thhalv10012635m.g Eutrema salsugineum HOM05D004262 ORTHO05D004886 7.8e-17 92.4 313 30.7
AL8G42160 Arabidopsis lyrata HOM05D004262 ORTHO05D004886 2.3e-16 90.9 170 32.4
Carub.0008s2552 Capsella rubella HOM05D004262 ORTHO05D004886 3.0e-16 90.5 325 26.5
BcaB07g29753 Brassica carinata HOM05D004262 ORTHO05D004886 1.1e-15 88.6 146 36.3
Sp6g33570 Schrenkiella parvula HOM05D004262 ORTHO05D004886 1.1e-15 88.6 303 30.4
Eucgr.I00260 Eucalyptus grandis HOM05D004262 ORTHO05D004886 4.3e-15 86.7 292 30.5
C02p63520 Brassica napus HOM05D004262 ORTHO05D004886 7.3e-15 85.9 191 29.3
AL6G20250 Arabidopsis lyrata HOM05D004262 ORTHO05D004886 1.6e-14 84.7 367 27.5
CARHR203550 Cardamine hirsuta HOM05D004262 ORTHO05D004886 2.8e-14 84.0 367 27.5
Glyma.04G205700 Glycine max HOM05D004262 ORTHO05D004886 4.7e-14 83.2 157 35.0
Nn1g06076 Nelumbo nucifera HOM05D004262 ORTHO05D004886 6.2e-14 82.8 236 29.7
AT5G09840 Arabidopsis thaliana HOM05D004262 ORTHO05D004886 8.1e-14 82.4 369 27.6
BcaB08g37177 Brassica carinata HOM05D004262 ORTHO05D004886 2.3e-13 80.9 310 25.2
AT5G64710 Arabidopsis thaliana HOM05D004262 ORTHO05D004886 6.8e-13 79.3 308 26.9
PSO675G3917 Papaver somniferum HOM05D004262 ORTHO05D004886 8.9e-13 79.0 338 26.0
Gohir.D11G259666 Gossypium hirsutum HOM05D004262 ORTHO05D004886 1.2e-12 78.6 168 31.0
Thhalv10005625m.g Eutrema salsugineum HOM05D004262 ORTHO05D004886 1.5e-12 78.2 324 28.4
Gorai.007G277700 Gossypium raimondii HOM05D004262 ORTHO05D004886 2.0e-12 77.8 168 31.0
Carub.0006s0826 Capsella rubella HOM05D004262 ORTHO05D004886 7.6e-12 75.9 367 28.6
Glyma.04G216600 Glycine max HOM05D004262 ORTHO05D004886 3.0e-08 63.9 228 28.1
Rhsim10G0143200 Rhododendron simsii HOM05D004262 ORTHO05D004886 3.9e-08 63.5 232 30.2


User provided reference genes

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