Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 4.4e-250 867.5 430 100.0
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 7.2e-176 620.9 430 68.1
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.0e-174 617.1 417 69.5
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 9.1e-171 604.0 420 69.5
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 7.7e-170 600.9 428 67.1
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.3e-169 600.1 421 67.7
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 3.8e-169 598.6 420 68.8
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 5.0e-169 598.2 429 66.2
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 5.5e-168 594.7 421 67.9
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.2e-167 593.6 429 67.4
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.7e-167 592.4 434 66.6
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.6e-167 592.0 434 66.6
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.0e-166 590.5 427 66.0
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 8.8e-166 587.4 418 66.5
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.5e-165 586.6 431 65.4
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.0e-165 586.3 456 63.6
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 3.3e-165 585.5 431 65.7
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.8e-164 582.4 425 65.4
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 2.8e-164 582.4 420 67.1
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 4.8e-164 581.6 427 64.6
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 6.3e-164 581.3 419 65.4
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.1e-163 580.5 420 66.9
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.4e-163 580.1 419 65.2
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.4e-163 579.3 425 65.2
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 2.4e-163 579.3 443 65.0
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.4e-163 579.3 419 64.9
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 3.1e-163 578.9 423 66.4
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 4.1e-163 578.6 425 65.2
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.2e-162 577.0 420 66.7
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.6e-162 576.6 425 66.1
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.0e-162 576.2 432 64.4
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 2.0e-162 576.2 432 65.3
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.7e-162 575.9 419 66.8
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 3.5e-162 575.5 426 64.1
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 4.5e-162 575.1 419 64.7
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 4.5e-162 575.1 421 66.3
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 5.9e-162 574.7 437 64.8
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 7.7e-162 574.3 423 65.7
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.3e-161 573.5 419 64.0
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.2e-161 572.8 419 64.9
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.1e-160 570.5 423 65.0
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.5e-160 570.1 432 63.7
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 4.2e-160 568.5 433 64.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 9.4e-160 567.4 420 65.5
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 9.4e-160 567.4 420 65.5
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.2e-159 567.0 425 64.0
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.6e-159 566.6 435 64.8
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 2.7e-159 565.8 427 64.2
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 3.6e-159 565.5 427 64.2
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 4.7e-159 565.1 421 63.9
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.4e-158 563.5 434 64.1
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.4e-158 563.5 425 63.8
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.3e-158 562.8 428 63.1
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 4.0e-158 562.0 429 64.3
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 5.2e-158 561.6 429 64.6
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 6.8e-158 561.2 442 60.6
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 8.8e-158 560.8 429 64.1
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.5e-157 560.1 429 64.1
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.5e-157 560.1 419 64.2
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 1.5e-157 560.1 418 64.1
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.0e-157 559.7 428 62.9
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 5.7e-157 558.1 426 62.9
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 3.7e-156 555.4 414 65.0
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 6.3e-156 554.7 425 63.8
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 8.3e-156 554.3 423 62.4
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 8.3e-156 554.3 429 62.9
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.1e-155 553.9 425 62.6
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 2.4e-155 552.7 425 62.8
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 3.1e-155 552.4 427 63.0
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 3.1e-155 552.4 421 64.4
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 3.1e-155 552.4 423 63.1
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 4.1e-155 552.0 457 59.7
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 9.1e-155 550.8 432 63.2
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 4.5e-154 548.5 421 60.8
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 7.7e-154 547.7 431 62.4
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 7.7e-154 547.7 425 63.1
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 7.7e-154 547.7 415 64.3
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 1.0e-153 547.4 426 63.4
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.0e-153 547.4 421 63.4
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.7e-153 546.6 418 63.9
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 6.6e-153 544.7 426 63.4
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.1e-152 543.9 425 63.1
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.5e-152 543.5 480 56.7
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 3.3e-152 542.3 423 61.9
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 7.2e-152 541.2 425 61.4
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.1e-151 539.7 424 61.1
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.8e-150 536.6 427 61.4
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.8e-150 536.6 427 61.4
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 5.2e-150 535.0 426 61.5
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 8.9e-150 534.3 530 53.4
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.2e-149 533.9 433 60.3
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 2.0e-149 533.1 420 61.2
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 4.4e-149 531.9 433 60.0
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.9e-148 528.5 426 60.8
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 6.3e-148 528.1 426 60.8
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.1e-147 527.3 417 61.6
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.4e-147 526.9 426 60.6
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.0e-146 523.1 422 62.3
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 4.5e-146 521.9 421 60.3
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 5.9e-146 521.5 419 60.1
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.3e-145 520.4 430 59.5
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 5.0e-145 518.5 427 59.5
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.1e-142 509.2 422 59.2
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 3.1e-142 509.2 422 60.2
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.4e-139 500.4 435 57.2
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 5.0e-137 491.9 417 60.0
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 9.8e-133 477.6 426 54.0
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 5.1e-129 465.3 354 63.6
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.9e-128 463.4 335 66.3
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 3.0e-121 439.5 437 53.5
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.4e-118 430.6 353 61.5
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 4.3e-112 409.1 293 66.2
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 7.6e-109 398.3 430 50.7
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 7.3e-104 381.7 263 69.6
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 2.0e-101 373.6 426 48.6
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 9.3e-99 364.8 257 67.7
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 1.2e-93 347.8 421 46.3
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 3.4e-85 319.7 196 76.5
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 2.2e-79 300.4 247 59.9
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 2.0e-61 240.7 291 47.1
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.2e-60 237.3 183 62.3
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 5.2e-41 172.9 136 61.8
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.1e-25 120.6 90 61.1
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 5.2e-25 119.8 96 57.3
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.2e-23 114.4 94 56.4
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 2.0e-21 107.8 91 53.8
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 3.5e-13 80.5 366 24.9


User provided reference genes

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