Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 9.2e-300 1032.7 500 100.0
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 5.4e-167 591.7 501 59.9
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.2e-166 590.5 501 59.5
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 1.5e-164 583.6 510 56.9
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.5e-164 583.6 499 58.9
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 5.6e-164 581.6 512 58.0
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 7.3e-164 581.3 512 57.6
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 2.1e-163 579.7 512 58.8
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 2.8e-163 579.3 512 58.6
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.6e-163 578.9 502 58.6
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 8.1e-163 577.8 508 57.7
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.1e-162 577.4 500 59.2
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 1.1e-162 577.4 508 57.5
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 3.1e-162 575.9 500 59.0
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 4.5e-161 572.0 500 58.2
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 4.5e-161 572.0 511 57.7
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 3.2e-159 565.8 508 57.1
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 9.3e-159 564.3 495 58.0
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 1.6e-158 563.5 508 55.9
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 2.7e-158 562.8 507 56.2
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 3.5e-158 562.4 510 56.1
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 7.9e-158 561.2 503 56.7
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 3.0e-157 559.3 500 57.0
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 2.5e-156 556.2 506 56.1
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 2.5e-156 556.2 502 57.4
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 3.7e-155 552.4 513 55.8
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 6.2e-155 551.6 484 59.1
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 8.1e-155 551.2 503 56.1
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 1.4e-154 550.4 514 57.4
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.8e-154 550.1 508 54.3
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 1.8e-154 550.1 499 56.7
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 3.1e-154 549.3 505 55.0
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 4.0e-154 548.9 496 57.9
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 4.0e-154 548.9 506 56.5
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.5e-153 547.0 505 55.8
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.3e-152 543.9 506 56.5
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 2.2e-152 543.1 504 54.0
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 2.2e-152 543.1 503 54.5
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 3.8e-152 542.3 512 54.9
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 3.8e-152 542.3 543 51.9
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 6.4e-152 541.6 504 54.0
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 6.4e-152 541.6 505 54.3
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.1e-151 540.8 503 55.7
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 3.2e-151 539.3 490 57.3
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.7e-150 536.2 503 55.1
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 7.9e-150 534.6 508 53.9
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 1.3e-149 533.9 503 54.5
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 1.8e-149 533.5 500 55.4
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 3.0e-149 532.7 498 55.0
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.1e-148 530.8 499 53.9
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 1.1e-148 530.8 498 54.8
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 4.8e-147 525.4 509 53.0
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 4.8e-147 525.4 511 54.2
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 1.4e-146 523.9 496 56.0
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 6.9e-146 521.5 508 54.1
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 9.0e-146 521.2 501 54.3
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 4.5e-145 518.8 510 53.3
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 7.6e-145 518.1 505 54.3
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 7.6e-145 518.1 505 54.3
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 2.2e-144 516.5 510 52.5
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.2e-144 516.5 482 53.7
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.8e-144 515.8 482 53.5
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 6.5e-144 515.0 480 54.2
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 1.1e-143 514.2 507 53.8
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 2.5e-143 513.1 509 52.1
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 7.1e-143 511.5 514 52.1
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 1.2e-142 510.8 510 51.4
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 2.7e-142 509.6 481 53.8
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 6.1e-142 508.4 511 51.7
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 1.8e-141 506.9 514 52.1
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 2.3e-141 506.5 507 52.1
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 2.3e-141 506.5 508 51.0
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 5.1e-141 505.4 460 56.1
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.1e-140 504.2 504 51.4
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 1.1e-140 504.2 495 53.7
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 1.5e-140 503.8 489 54.8
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 3.3e-140 502.7 480 54.4
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 4.3e-140 502.3 494 52.4
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 5.7e-140 501.9 490 53.7
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 7.4e-140 501.5 516 51.9
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 9.7e-140 501.1 497 51.1
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 2.8e-139 499.6 503 52.5
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 4.8e-139 498.8 497 50.9
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 8.2e-139 498.0 506 51.8
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 3.1e-138 496.1 497 52.7
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 2.6e-137 493.0 502 50.0
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 2.6e-137 493.0 502 50.0
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 5.9e-137 491.9 510 50.8
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 5.9e-137 491.9 512 52.0
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 6.5e-136 488.4 500 51.2
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 6.1e-134 481.9 516 49.4
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 5.7e-132 475.3 505 50.9
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 8.2e-131 471.5 507 49.1
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 4.1e-130 469.2 499 50.3
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 1.4e-127 460.7 509 47.7
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 7.0e-122 441.8 534 46.8
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 1.5e-121 440.7 461 51.4
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 4.5e-121 439.1 502 48.2
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 2.1e-118 430.3 517 47.2
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 2.0e-113 413.7 488 48.4
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 5.9e-113 412.1 418 53.1
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 2.1e-110 403.7 345 58.6
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 4.1e-98 362.8 511 42.7
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 1.8e-93 347.4 491 42.2
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 4.0e-93 346.3 438 45.7
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 1.7e-91 340.9 313 56.2
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 2.9e-91 340.1 366 50.3
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.0e-88 331.6 363 49.9
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 2.1e-73 280.8 323 49.2
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 6.0e-73 279.3 507 36.9
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 6.6e-64 249.2 400 35.5
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 3.8e-59 233.4 365 36.7
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 8.4e-59 232.3 140 74.3
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 1.2e-57 228.4 354 41.2
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 8.7e-56 222.2 712 27.5
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 9.6e-39 165.6 363 31.4
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.6e-33 148.3 95 73.7
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.5e-28 130.2 128 53.1
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.0e-24 119.0 149 47.7
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 8.2e-22 109.4 77 66.2
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 8.8e-08 62.8 124 33.1
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 5.7e-07 60.1 57 49.1


User provided reference genes

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