Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 5.3e-212 740.7 369 100.0
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.4e-175 619.8 370 82.2
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 4.6e-171 604.7 369 79.4
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 2.3e-170 602.4 369 79.1
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 6.6e-170 600.9 369 79.7
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 8.6e-170 600.5 367 79.6
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.5e-169 599.7 369 79.1
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.9e-169 599.4 369 80.5
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 7.3e-169 597.4 370 79.7
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 9.5e-169 597.0 370 78.6
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 1.2e-168 596.7 369 79.7
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.2e-168 596.7 372 79.3
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.2e-168 596.7 369 79.4
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 2.1e-168 595.9 371 79.8
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.8e-168 595.5 369 78.6
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.7e-168 594.7 369 80.2
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 4.7e-168 594.7 369 79.9
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 6.2e-168 594.3 372 79.0
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 8.1e-168 594.0 368 79.1
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.4e-167 593.2 371 79.5
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 1.4e-167 593.2 369 79.7
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.8e-167 592.8 368 78.5
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 2.4e-167 592.4 369 79.9
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 2.4e-167 592.4 369 79.1
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 2.4e-167 592.4 369 79.7
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 2.4e-167 592.4 372 78.8
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 4.0e-167 591.7 366 79.0
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 4.0e-167 591.7 369 79.4
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 4.0e-167 591.7 369 79.1
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 6.8e-167 590.9 369 79.1
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 8.9e-167 590.5 376 78.7
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 8.9e-167 590.5 371 79.0
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 8.9e-167 590.5 369 78.9
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.2e-166 590.1 383 77.8
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.2e-166 590.1 371 78.7
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 1.5e-166 589.7 369 79.9
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.6e-166 589.0 370 77.8
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 4.4e-166 588.2 372 79.6
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 5.8e-166 587.8 369 79.1
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 5.8e-166 587.8 371 78.7
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 7.6e-166 587.4 369 77.5
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 7.6e-166 587.4 370 78.1
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 7.6e-166 587.4 369 79.4
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 7.6e-166 587.4 369 79.4
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.6e-166 587.4 372 79.6
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 9.9e-166 587.0 370 78.1
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.3e-165 586.6 370 78.1
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 2.2e-165 585.9 369 77.5
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 2.2e-165 585.9 369 78.6
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 2.9e-165 585.5 370 77.8
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 2.9e-165 585.5 369 77.2
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 6.4e-165 584.3 369 77.8
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 8.4e-165 583.9 370 77.6
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 8.4e-165 583.9 370 77.6
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.4e-164 583.2 369 76.2
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 1.9e-164 582.8 369 78.0
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 1.9e-164 582.8 369 78.9
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 2.4e-164 582.4 369 77.8
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 5.4e-164 581.3 369 77.0
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 7.1e-164 580.9 369 76.7
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 7.1e-164 580.9 369 78.6
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 9.2e-164 580.5 396 73.2
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 1.2e-163 580.1 370 76.5
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 2.1e-163 579.3 369 77.8
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 2.7e-163 578.9 408 72.3
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 3.5e-163 578.6 369 77.0
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 3.5e-163 578.6 369 77.2
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 3.5e-163 578.6 370 76.8
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 6.0e-163 577.8 365 78.1
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.0e-163 577.8 369 77.8
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 7.8e-163 577.4 369 77.5
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 7.8e-163 577.4 369 77.2
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.0e-162 577.0 369 77.2
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 1.7e-162 576.2 370 77.6
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.3e-162 575.9 370 76.5
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 2.3e-162 575.9 370 77.6
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 2.3e-162 575.9 371 75.5
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 3.9e-162 575.1 368 77.7
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 5.1e-162 574.7 369 76.7
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 6.6e-162 574.3 370 77.3
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 8.7e-162 573.9 370 75.7
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 8.7e-162 573.9 363 76.9
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.1e-161 573.5 363 77.1
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.1e-161 573.5 371 77.6
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.1e-161 573.5 386 75.1
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 1.9e-161 572.8 370 75.9
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 2.5e-161 572.4 368 75.0
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 3.3e-161 572.0 358 77.9
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 5.6e-161 571.2 362 75.4
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 9.6e-161 570.5 368 75.0
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 1.2e-160 570.1 369 76.2
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 1.6e-160 569.7 370 75.4
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.8e-160 568.9 373 75.6
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 2.8e-160 568.9 363 76.9
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 3.6e-160 568.5 369 75.9
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.6e-160 568.5 369 76.7
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 6.2e-160 567.8 370 75.4
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.4e-159 566.6 370 75.4
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 3.1e-159 565.5 356 77.2
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 2.0e-158 562.8 362 75.4
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 2.0e-158 562.8 363 76.0
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 2.6e-158 562.4 355 78.0
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 5.8e-158 561.2 369 75.1
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 9.9e-158 560.5 370 75.1
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 1.7e-157 559.7 361 77.3
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 2.2e-157 559.3 401 71.6
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.9e-157 558.9 351 78.3
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.9e-156 556.2 369 72.9
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 1.9e-156 556.2 362 74.0
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 4.2e-156 555.1 369 73.7
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 9.3e-156 553.9 361 75.1
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.1e-155 552.7 369 75.6
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 6.0e-155 551.2 351 78.1
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.0e-154 550.4 368 70.1
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.3e-154 550.1 369 76.4
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 1.3e-154 550.1 361 74.5
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 1.3e-154 550.1 361 74.5
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 1.3e-154 550.1 361 74.5
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 1.3e-154 550.1 361 74.5
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 1.3e-154 550.1 361 74.5
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 3.0e-154 548.9 369 73.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 3.9e-154 548.5 361 74.0
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 2.5e-153 545.8 358 76.0
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 1.3e-152 543.5 432 66.0
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 6.2e-152 541.2 367 70.0
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.8e-151 539.7 350 76.6
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 1.8e-151 539.7 359 73.8
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.8e-151 539.7 370 72.7
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 2.4e-151 539.3 369 69.6
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 4.0e-151 538.5 370 72.7
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 5.3e-151 538.1 367 74.7
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 2.9e-149 532.3 367 69.5
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 8.4e-149 530.8 351 75.5
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.9e-148 529.6 370 71.9
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 7.1e-148 527.7 351 74.6
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 3.5e-147 525.4 368 72.0
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 3.5e-147 525.4 369 67.2
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 4.6e-147 525.0 361 72.9
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.3e-146 523.5 371 69.3
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 3.9e-146 521.9 361 70.1
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 6.7e-146 521.2 369 71.3
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 5.6e-145 518.1 365 67.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 8.1e-144 514.2 368 68.5
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.1e-143 513.8 373 70.0
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 7.1e-140 501.1 396 66.4
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 3.7e-136 488.8 367 64.3
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.4e-127 459.5 282 78.7
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 1.2e-126 457.2 385 59.2
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 1.3e-125 453.8 289 77.5
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 4.2e-124 448.7 371 63.3
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 7.2e-124 448.0 363 65.0
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.5e-121 440.3 324 68.5
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 4.3e-121 438.7 357 61.9
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.4e-119 433.7 279 75.6
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 2.4e-119 433.0 328 67.7
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 6.9e-119 431.4 401 55.1
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 2.0e-118 429.9 367 57.2
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 3.4e-118 429.1 276 76.4
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 5.9e-118 428.3 280 74.6
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.4e-116 423.7 278 75.2
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 7.2e-116 421.4 281 75.4
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.5e-113 413.7 369 54.5
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 1.7e-112 410.2 273 72.9
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 3.9e-106 389.0 274 71.9
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 9.7e-105 384.4 290 65.9
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 2.2e-104 383.3 239 78.2
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.1e-83 313.5 199 76.9
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 2.0e-81 307.0 272 59.9
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 3.4e-81 306.2 177 81.9
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.1e-79 301.2 197 74.1
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 9.5e-76 288.1 198 74.2
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 1.2e-62 244.6 171 73.7
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 3.0e-53 213.4 268 50.7
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 9.9e-49 198.4 372 32.3
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 6.2e-43 179.1 113 78.8
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 1.8e-42 177.6 441 28.3
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 5.3e-42 176.0 119 68.1
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 6.9e-42 175.6 399 26.6
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 1.5e-41 174.5 147 61.2
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 1.7e-40 171.0 119 66.4
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 2.4e-34 150.6 316 30.7
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 1.1e-28 131.7 115 57.4
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 1.0e-24 118.6 84 69.0
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 6.9e-10 69.3 49 73.5


User provided reference genes

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