Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0789G123 Amborella trichopoda HOM05D005251 ORTHO05D006680 1.2e-67 259.6 121 100.0
Nn8g38856 Nelumbo nucifera HOM05D005251 ORTHO05D006680 3.5e-43 178.3 117 68.4
COL.COLO4_18196 Corchorus olitorius HOM05D005251 ORTHO05D006680 1.3e-42 176.4 117 67.5
Thecc.09G088600 Theobroma cacao HOM05D005251 ORTHO05D006680 3.8e-42 174.9 117 67.5
QL02p062545 Quercus lobata HOM05D005251 ORTHO05D006680 8.5e-42 173.7 117 67.5
CSS0048193 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 1.5e-41 172.9 117 65.8
Dinv36771 Davidia involucrata HOM05D005251 ORTHO05D006680 1.9e-41 172.6 117 65.8
Actinidia39715 Actinidia chinensis HOM05D005251 ORTHO05D006680 2.5e-41 172.2 117 64.1
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 3.2e-41 171.8 117 65.0
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea HOM05D005251 ORTHO05D006680 4.2e-41 171.4 115 66.1
Cpa.g.sc61.41 Carica papaya HOM05D005251 ORTHO05D006680 4.2e-41 171.4 117 69.2
Gohir.D06G071400 Gossypium hirsutum HOM05D005251 ORTHO05D006680 7.2e-41 170.6 117 65.8
Gorai.010G083200 Gossypium raimondii HOM05D005251 ORTHO05D006680 7.2e-41 170.6 117 65.8
Sabra06G0120400 Salix brachista HOM05D005251 ORTHO05D006680 1.2e-40 169.9 121 65.3
CiPaw.03G215300 Carya illinoinensis HOM05D005251 ORTHO05D006680 1.6e-40 169.5 117 65.8
TAR624G0724 Trochodendron aralioides HOM05D005251 ORTHO05D006680 1.6e-40 169.5 117 65.0
Eucgr.C00887 Eucalyptus grandis HOM05D005251 ORTHO05D006680 2.1e-40 169.1 117 65.0
Ciclev10010506m.g Citrus clementina HOM05D005251 ORTHO05D006680 2.8e-40 168.7 117 65.0
Gohir.A06G072900 Gossypium hirsutum HOM05D005251 ORTHO05D006680 2.8e-40 168.7 117 65.0
HanXRQChr06g0178551 Helianthus annuus HOM05D005251 ORTHO05D006680 3.6e-40 168.3 117 63.2
Manes.03G034200 Manihot esculenta HOM05D005251 ORTHO05D006680 4.7e-40 167.9 117 65.8
SGA_v2.0_scaffold21G09392 Striga asiatica HOM05D005251 ORTHO05D006680 4.7e-40 167.9 117 65.8
TWI34G0442 Tripterygium wilfordii HOM05D005251 ORTHO05D006680 4.7e-40 167.9 117 66.7
CSS0047543 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 6.1e-40 167.5 117 64.1
HPP92_009143 Vanilla planifolia HOM05D005251 ORTHO05D006680 6.1e-40 167.5 117 63.2
GSVIVG01015197001 Vitis vinifera HOM05D005251 ORTHO05D006680 6.1e-40 167.5 117 64.1
Prupe.7G209200 Prunus persica HOM05D005251 ORTHO05D006680 8.0e-40 167.2 117 64.1
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 1.0e-39 166.8 117 64.1
FAN19G0073 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.0e-39 166.8 117 62.4
Solyc12g008890.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 1.0e-39 166.8 122 62.3
Aqoxy7G04044 Aquilegia oxysepala HOM05D005251 ORTHO05D006680 1.4e-39 166.4 117 66.7
FvH4_1g07540 Fragaria vesca HOM05D005251 ORTHO05D006680 1.4e-39 166.4 117 62.4
FAN26G3339 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.4e-39 166.4 117 62.4
FAN28G0072 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.4e-39 166.4 117 62.4
Atru.BG.14.p Acer truncatum HOM05D005251 ORTHO05D006680 2.3e-39 165.6 116 63.8
arahy.Tifrunner.gnm1.ann1.V18GKH Arachis hypogaea HOM05D005251 ORTHO05D006680 2.3e-39 165.6 115 64.3
PGR142G3350 Punica granatum HOM05D005251 ORTHO05D006680 2.3e-39 165.6 117 63.2
Potri.006G152100 Populus trichocarpa HOM05D005251 ORTHO05D006680 3.0e-39 165.2 120 64.2
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 4.0e-39 164.9 114 64.0
Rhsim05G0020500 Rhododendron simsii HOM05D005251 ORTHO05D006680 4.0e-39 164.9 117 64.1
RcHm_v2.0_Chr2g0093421 Rosa chinensis HOM05D005251 ORTHO05D006680 4.0e-39 164.9 117 61.5
Lsat_1_v5_gn_8_87701 Lactuca sativa HOM05D005251 ORTHO05D006680 5.2e-39 164.5 117 62.4
Sopen12g003810 Solanum pennellii HOM05D005251 ORTHO05D006680 5.2e-39 164.5 117 63.2
PGSC0003DMG400000278 Solanum tuberosum HOM05D005251 ORTHO05D006680 5.2e-39 164.5 117 62.4
MELO3C015476.2 Cucumis melo HOM05D005251 ORTHO05D006680 6.8e-39 164.1 117 62.4
FAN23G1060 Fragaria x ananassa HOM05D005251 ORTHO05D006680 6.8e-39 164.1 117 61.5
FAN26G1479 Fragaria x ananassa HOM05D005251 ORTHO05D006680 8.8e-39 163.7 117 61.5
Duzib150G0576 Durio zibethinus HOM05D005251 ORTHO05D006680 1.2e-38 163.3 117 63.2
Sc18g0002110 Simmondsia chinensis HOM05D005251 ORTHO05D006680 1.2e-38 163.3 117 63.2
CsaV3_1G040480 Cucumis sativus L. HOM05D005251 ORTHO05D006680 1.5e-38 162.9 117 61.5
Sed0019984 Sechium edule HOM05D005251 ORTHO05D006680 1.5e-38 162.9 117 60.7
THA.LOC104817759 Tarenaya hassleriana HOM05D005251 ORTHO05D006680 1.5e-38 162.9 114 65.8
MSTRG.10560 Avicennia marina HOM05D005251 ORTHO05D006680 2.0e-38 162.5 117 62.4
PSO210G1153 Papaver somniferum HOM05D005251 ORTHO05D006680 2.6e-38 162.2 117 61.5
Migut.L01497 Erythranthe guttata HOM05D005251 ORTHO05D006680 3.4e-38 161.8 117 62.4
Psat4g015200 Pisum sativum HOM05D005251 ORTHO05D006680 9.8e-38 160.2 114 63.2
Ah.09g228240 Amaranthus hybridus HOM05D005251 ORTHO05D006680 1.7e-37 159.5 116 60.3
CAN.G1241.24 Capsicum annuum HOM05D005251 ORTHO05D006680 2.8e-37 158.7 117 61.5
Cc06_g11450 Coffea canephora HOM05D005251 ORTHO05D006680 2.8e-37 158.7 114 64.0
AT5G56900 Arabidopsis thaliana HOM05D005251 ORTHO05D006680 4.9e-37 157.9 114 63.2
PSO210G7113 Papaver somniferum HOM05D005251 ORTHO05D006680 6.3e-37 157.5 117 59.8
AL8G32750 Arabidopsis lyrata HOM05D005251 ORTHO05D006680 1.4e-36 156.4 114 63.2
Glyma.17G054700 Glycine max HOM05D005251 ORTHO05D006680 1.4e-36 156.4 114 62.3
BcaC04g20043 Brassica carinata HOM05D005251 ORTHO05D006680 1.8e-36 156.0 114 63.2
C09p48540 Brassica napus HOM05D005251 ORTHO05D006680 1.8e-36 156.0 114 63.2
BolC9t57695H Brassica oleracea HOM05D005251 ORTHO05D006680 1.8e-36 156.0 114 63.2
Lj4g0006207 Lotus japonicus HOM05D005251 ORTHO05D006680 1.8e-36 156.0 114 60.5
Carub.0008s1736 Capsella rubella HOM05D005251 ORTHO05D006680 3.1e-36 155.2 114 62.3
Sp6g18620 Schrenkiella parvula HOM05D005251 ORTHO05D006680 4.1e-36 154.8 114 63.2
unitig_8.g4690 Utricularia gibba HOM05D005251 ORTHO05D006680 4.1e-36 154.8 113 61.1
Thhalv10013022m.g Eutrema salsugineum HOM05D005251 ORTHO05D006680 5.4e-36 154.5 114 62.3
MD02G1080200 Malus domestica HOM05D005251 ORTHO05D006680 5.4e-36 154.5 118 61.0
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis HOM05D005251 ORTHO05D006680 9.2e-36 153.7 116 57.8
BcaB08g36046 Brassica carinata HOM05D005251 ORTHO05D006680 9.2e-36 153.7 114 62.3
A10p14170 Brassica napus HOM05D005251 ORTHO05D006680 1.6e-35 152.9 114 59.6
Lalb_Chr12g0199801 Lupinus albus HOM05D005251 ORTHO05D006680 2.0e-35 152.5 116 61.2
Aa31LG3G12780 Aethionema arabicum HOM05D005251 ORTHO05D006680 3.5e-35 151.8 114 61.4
AUR62029068 Chenopodium quinoa HOM05D005251 ORTHO05D006680 5.9e-35 151.0 117 59.8
AUR62033961 Chenopodium quinoa HOM05D005251 ORTHO05D006680 5.9e-35 151.0 117 59.8
Phvul.003G136700 Phaseolus vulgaris HOM05D005251 ORTHO05D006680 5.9e-35 151.0 114 58.8
Glyma.13G104400 Glycine max HOM05D005251 ORTHO05D006680 7.8e-35 150.6 120 58.3
Medtr4g126260 Medicago truncatula HOM05D005251 ORTHO05D006680 7.8e-35 150.6 115 60.9
EL10Ac8g19209 Beta vulgaris HOM05D005251 ORTHO05D006680 5.0e-34 147.9 116 58.6
Mapoly0009s0116 Marchantia polymorpha HOM05D005251 ORTHO05D006680 3.3e-33 145.2 114 56.1
TPR.G9472 Trifolium pratense HOM05D005251 ORTHO05D006680 4.3e-33 144.8 130 54.6
Cfa003082 Carpinus fangiana HOM05D005251 ORTHO05D006680 1.2e-32 143.3 117 57.3
Pp3c16_14300 Physcomitrium patens HOM05D005251 ORTHO05D006680 2.8e-32 142.1 114 59.6
MBI04_g31157_MAGBIO Magnolia biondii HOM05D005251 ORTHO05D006680 1.5e-30 136.3 90 65.6
Os09g0364000 Oryza sativa ssp. japonica HOM05D005251 ORTHO05D006680 2.6e-30 135.6 118 57.6
SMO147G0126 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 1.7e-29 132.9 114 52.6
SMO273G0018 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 8.3e-29 130.6 113 52.2
vmacro17242 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 1.1e-28 130.2 96 62.5
Oeu018416.2 Olea europaea HOM05D005251 ORTHO05D006680 3.2e-28 128.6 99 60.6
VMungo1215G2738 Vigna mungo HOM05D005251 ORTHO05D006680 9.2e-28 127.1 109 57.8
ClCG03G015560 Citrullus lanatus HOM05D005251 ORTHO05D006680 1.6e-27 126.3 96 58.3
Lj4A303G24 Lonicera japonica HOM05D005251 ORTHO05D006680 2.7e-27 125.6 92 59.8
C09p50860 Brassica napus HOM05D005251 ORTHO05D006680 7.8e-27 124.0 98 58.2
BraA10t43510Z Brassica rapa HOM05D005251 ORTHO05D006680 1.7e-26 122.9 94 56.4
MD15G1207700 Malus domestica HOM05D005251 ORTHO05D006680 9.5e-25 117.1 88 59.1
PRCOL_00000275 Prasinoderma coloniale HOM05D005251 ORTHO05D006680 2.5e-17 92.4 118 39.8
CBR_g54012 Chara braunii HOM05D005251 ORTHO05D006680 2.1e-16 89.4 111 44.1
CANSAT56G1459 Cannabis sativa HOM05D005251 ORTHO05D006680 1.8e-15 86.3 64 57.8
Cre07.g338900 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 1.8e-15 86.3 80 50.0
BcaNung02827 Brassica carinata HOM05D005251 ORTHO05D006680 6.0e-11 71.2 52 61.5
BcaNung03955 Brassica carinata HOM05D005251 ORTHO05D006680 6.0e-11 71.2 52 61.5
MCO16G282 Micromonas commoda HOM05D005251 ORTHO05D006680 1.9e-09 66.2 104 35.6
BolC9t57946H Brassica oleracea HOM05D005251 ORTHO05D006680 8.1e-08 60.8 40 65.0
C06p07130 Brassica napus HOM05D005251 ORTHO05D006680 7.6e-06 54.3 41 58.5


User provided reference genes

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