Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 2.1e-76 288.9 140 100.0
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 9.9e-34 147.1 131 58.0
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 2.7e-31 139.0 151 50.3
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 7.9e-31 137.5 148 46.6
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 3.9e-30 135.2 135 52.6
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 3.9e-30 135.2 135 52.6
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 5.1e-30 134.8 135 52.6
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 5.1e-30 134.8 132 51.5
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 6.7e-30 134.4 133 53.4
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.1e-29 133.7 130 53.1
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 2.5e-29 132.5 142 45.1
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 3.3e-29 132.1 126 54.0
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 5.6e-29 131.3 132 52.3
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.6e-28 129.8 136 52.9
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 1.6e-28 129.8 128 50.0
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 1.6e-28 129.8 134 49.3
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 2.8e-28 129.0 127 48.8
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 6.2e-28 127.9 130 49.2
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 8.1e-28 127.5 146 45.9
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 1.1e-27 127.1 126 50.8
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.1e-27 127.1 137 50.4
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.4e-27 126.7 134 49.3
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 2.4e-27 125.9 132 50.0
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 2.4e-27 125.9 130 51.5
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 3.1e-27 125.6 132 50.8
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 5.3e-27 124.8 126 53.2
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 1.2e-26 123.6 125 52.8
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 1.2e-26 123.6 138 47.1
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.5e-26 123.2 137 50.4
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 3.4e-26 122.1 146 47.3
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 4.5e-26 121.7 140 46.4
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 4.5e-26 121.7 135 48.9
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 1.3e-25 120.2 136 50.0
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 1.7e-25 119.8 147 44.9
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 1.7e-25 119.8 141 43.3
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 1.7e-25 119.8 174 40.8
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 2.2e-25 119.4 132 49.2
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 2.2e-25 119.4 121 52.1
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 2.2e-25 119.4 124 47.6
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 2.9e-25 119.0 132 49.2
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 2.9e-25 119.0 146 44.5
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 3.8e-25 118.6 126 46.8
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 4.9e-25 118.2 121 51.2
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 6.4e-25 117.9 134 44.0
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 1.1e-24 117.1 128 46.1
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 1.1e-24 117.1 138 44.2
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 1.1e-24 117.1 146 43.8
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 1.4e-24 116.7 162 43.2
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 1.9e-24 116.3 128 44.5
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 2.4e-24 115.9 149 40.9
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 2.4e-24 115.9 129 49.6
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 3.2e-24 115.5 149 43.0
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 3.2e-24 115.5 141 46.8
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 4.2e-24 115.2 162 42.6
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 5.5e-24 114.8 136 44.9
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 9.3e-24 114.0 128 45.3
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 9.3e-24 114.0 128 47.7
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 1.6e-23 113.2 149 43.0
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 2.1e-23 112.8 167 38.3
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 6.0e-23 111.3 159 42.8
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 7.9e-23 110.9 155 40.0
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 7.9e-23 110.9 172 38.4
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 1.3e-22 110.2 173 39.3
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 1.8e-22 109.8 123 45.5
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 3.9e-22 108.6 155 40.0
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 5.1e-22 108.2 169 39.1
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 8.7e-22 107.5 157 38.9
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 1.5e-21 106.7 143 39.2
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.5e-21 106.7 147 42.2
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 1.9e-21 106.3 161 40.4
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 2.5e-21 105.9 160 40.6
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 7.4e-21 104.4 150 38.0
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 7.4e-21 104.4 150 38.0
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 9.6e-21 104.0 144 44.4
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 2.8e-20 102.4 155 38.1
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 3.7e-20 102.1 184 35.9
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 4.5e-18 95.1 185 34.6
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 6.5e-17 91.3 160 36.2
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 8.4e-17 90.9 162 35.2
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 8.4e-17 90.9 132 39.4
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 1.1e-16 90.5 136 41.9
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 1.4e-16 90.1 159 35.2
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 5.5e-16 88.2 71 57.7
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 5.5e-16 88.2 93 47.3
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 5.5e-16 88.2 93 47.3
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 5.5e-16 88.2 142 34.5
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 1.6e-15 86.7 112 43.8
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 4.6e-15 85.1 141 36.9
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 7.9e-15 84.3 161 32.9
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 3.0e-14 82.4 189 29.1
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 9.6e-13 77.4 105 43.8
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 1.3e-12 77.0 189 28.0
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 3.7e-12 75.5 186 29.0
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 4.8e-12 75.1 142 33.8
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 8.2e-12 74.3 69 59.4
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 8.2e-12 74.3 124 41.9
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 1.1e-11 73.9 42 66.7
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 1.5e-10 70.1 96 38.5
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 2.0e-10 69.7 96 38.5
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 2.6e-10 69.3 95 43.2
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 5.9e-10 68.2 96 43.8
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 5.0e-09 65.1 151 29.8
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.4e-08 63.5 74 48.6
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 1.4e-08 63.5 105 40.0
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 1.9e-08 63.2 97 45.4
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 7.2e-08 61.2 63 54.0
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 4.6e-07 58.5 119 33.6
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 2.3e-06 56.2 103 37.9
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 2.3e-06 56.2 69 47.8


User provided reference genes

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