Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 0.0e+00 1387.9 700 100.0
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 2.4e-277 958.7 697 69.0
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 2.4e-277 958.7 698 69.2
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 1.7e-275 952.6 682 70.5
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 2.9e-275 951.8 684 70.8
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 1.1e-274 949.9 685 69.3
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 2.7e-273 945.3 683 68.8
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 3.5e-273 944.9 702 68.5
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 4.6e-273 944.5 687 69.4
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 6.0e-273 944.1 665 70.1
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 1.1e-269 933.3 679 69.2
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 1.5e-268 929.5 688 68.0
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 2.2e-267 925.6 682 69.1
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 7.2e-266 920.6 690 68.3
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 1.2e-265 919.8 684 68.3
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 8.7e-264 913.7 682 67.7
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 1.5e-263 912.9 685 67.6
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 2.8e-262 908.7 684 67.1
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 1.1e-261 906.7 682 68.0
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 1.4e-261 906.4 688 67.2
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 3.1e-261 905.2 675 68.4
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 2.0e-260 902.5 674 68.0
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 1.0e-259 900.2 706 67.0
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 5.0e-259 897.9 690 64.6
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 5.0e-259 897.9 690 64.6
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 8.5e-259 897.1 698 66.2
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.5e-258 895.6 688 66.3
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 2.5e-258 895.6 688 66.3
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 7.9e-257 890.6 705 65.8
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 3.0e-256 888.6 680 66.2
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 6.7e-256 887.5 720 65.0
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 3.3e-255 885.2 707 64.1
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 4.3e-255 884.8 687 64.9
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 5.7e-255 884.4 688 65.6
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 4.1e-253 878.2 741 63.2
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 1.5e-252 876.3 690 64.8
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 4.5e-252 874.8 679 65.1
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 1.3e-251 873.2 695 64.0
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 8.5e-251 870.5 686 63.4
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 9.4e-250 867.1 691 65.7
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.2e-249 866.7 669 65.9
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 2.7e-249 865.5 690 63.9
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 2.7e-249 865.5 696 63.2
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 3.6e-249 865.1 703 63.9
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 6.1e-249 864.4 693 62.6
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 1.4e-248 863.2 688 63.8
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 1.8e-248 862.8 689 63.9
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 2.3e-248 862.4 692 64.3
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 2.3e-248 862.4 682 64.1
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 6.7e-248 860.9 696 63.1
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 6.7e-248 860.9 682 63.8
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 2.0e-247 859.4 680 64.4
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 1.3e-246 856.7 686 64.7
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 3.7e-246 855.1 691 63.5
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 4.8e-246 854.7 709 61.5
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 1.8e-245 852.8 682 64.2
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 7.7e-244 847.4 687 63.0
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.3e-243 846.7 722 61.1
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 3.2e-242 842.0 686 63.6
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 2.1e-241 839.3 710 62.3
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 6.1e-241 837.8 688 62.2
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 8.8e-240 833.9 673 64.3
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 1.1e-239 833.6 677 62.8
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 2.2e-238 829.3 692 61.0
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 4.8e-238 828.2 731 60.5
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 6.3e-238 827.8 734 60.4
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 4.1e-237 825.1 684 62.7
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 9.1e-237 823.9 685 62.5
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 2.7e-233 812.4 685 61.2
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 1.4e-232 810.1 697 60.3
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 2.0e-231 806.2 701 60.3
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 8.3e-230 800.8 1009 47.0
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 1.4e-229 800.0 696 59.8
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 3.1e-229 798.9 685 60.1
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 3.5e-228 795.4 700 59.4
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 1.3e-227 793.5 691 59.5
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 1.5e-226 790.0 692 59.4
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 3.2e-226 788.9 696 58.8
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 4.2e-226 788.5 691 59.5
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 5.5e-226 788.1 683 58.9
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 7.2e-226 787.7 684 61.1
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 1.0e-224 783.9 698 58.6
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 1.4e-224 783.5 698 58.6
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 1.2e-223 780.4 510 73.5
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 2.4e-221 772.7 583 64.5
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 3.3e-218 762.3 702 57.5
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 2.1e-217 759.6 702 57.4
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 2.0e-215 753.1 697 57.2
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 2.0e-215 753.1 697 57.2
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 9.8e-215 750.7 682 56.5
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 2.3e-211 739.6 690 56.4
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 5.0e-211 738.4 728 53.2
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 6.6e-211 738.0 739 54.8
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 1.2e-209 733.8 698 54.4
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 7.5e-207 724.5 452 77.2
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 3.9e-203 712.2 691 57.0
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 1.5e-202 710.3 701 54.5
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 1.1e-200 704.1 675 54.4
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 1.7e-198 696.8 510 66.5
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 8.1e-185 651.4 832 45.9
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 1.3e-182 644.0 433 72.7
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 2.4e-181 639.8 683 51.8
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 4.2e-181 639.0 677 53.5
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 1.2e-180 637.5 549 60.1
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 5.1e-179 632.1 441 67.3
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 5.5e-165 585.5 689 46.4
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 4.5e-159 565.8 543 54.5
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 3.2e-149 533.1 579 50.8
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 1.1e-146 524.6 733 41.5
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 4.3e-146 522.7 701 41.7
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 4.8e-145 519.2 553 52.8
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 3.6e-140 503.1 446 61.4
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 7.7e-119 432.2 534 44.0
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 3.4e-114 416.8 432 52.5
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 5.7e-114 416.0 405 57.3
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-96 358.2 433 47.1
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 1.5e-93 348.2 299 60.2
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 8.3e-89 332.4 614 36.2
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 7.3e-85 319.3 331 52.3
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 2.2e-81 307.8 656 35.2
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 3.7e-81 307.0 304 52.0
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 4.9e-81 306.6 371 45.8
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 7.6e-66 256.1 255 54.9
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 7.6e-66 256.1 245 53.1
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 2.2e-65 254.6 359 44.6
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 1.1e-59 235.7 260 54.2
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 1.1e-56 225.7 140 77.9
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 2.4e-56 224.6 262 48.1
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 2.1e-55 221.5 186 58.6
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 3.9e-54 217.2 131 77.1
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 8.7e-54 216.1 265 47.2
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 1.5e-50 205.3 257 47.1
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 5.8e-50 203.4 257 46.7
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 1.3e-44 185.7 107 80.4
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 2.8e-44 184.5 119 73.1
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 2.2e-41 174.9 235 46.4
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 8.4e-41 172.9 119 73.1
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 1.1e-40 172.6 102 77.5
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 3.2e-40 171.0 102 76.5
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 6.3e-36 156.8 87 82.8
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 6.3e-36 156.8 87 82.8
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 6.3e-36 156.8 87 82.8
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 5.3e-35 153.7 149 53.7
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 5.3e-35 153.7 85 82.4
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 1.5e-34 152.1 119 63.9
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 3.4e-34 151.0 168 45.2
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 5.9e-34 150.2 107 62.6
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 7.6e-34 149.8 103 72.8
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 5.0e-33 147.1 79 81.0
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 7.2e-32 143.3 79 78.5
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 1.6e-31 142.1 207 39.1
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 1.6e-31 142.1 244 36.9
Zm00001eb034510 Zea mays HOM05D003729 ORTHO05D004384 3.6e-31 141.0 106 60.4
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 1.1e-29 136.0 203 40.9
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 7.7e-26 123.2 162 45.1
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-25 122.1 70 74.3
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-22 112.5 70 68.6
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 8.8e-22 109.8 106 55.7
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 3.7e-20 104.4 189 38.6
Zm00001eb284510 Zea mays HOM05D001162 ORTHO05D001218 1.4e-19 102.4 57 73.7
Zm00001eb173210 Zea mays HOM05D001162 ORTHO05D001218 3.1e-19 101.3 57 71.9
Zm00001eb077600 Zea mays HOM05D001162 ORTHO05D029047 4.1e-19 100.9 55 74.5
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 1.2e-18 99.4 97 52.6
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 3.4e-18 97.8 62 69.4
Cpa.g.sc5.181 Carica papaya HOM05D003729 ORTHO05D004384 5.9e-18 97.1 56 71.4
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 5.9e-18 97.1 88 58.0
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-17 95.5 62 69.4
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 6.5e-17 93.6 98 52.0
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 6.5e-17 93.6 70 60.0
Haze_20208 Corylus avellana HOM05D003729 ORTHO05D004384 2.7e-15 88.2 55 67.3
Medtr8g007595 Medicago truncatula HOM05D003729 ORTHO05D004384 8.0e-15 86.7 48 81.2
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-14 85.9 127 39.4
Sabra16G0039200 Salix brachista HOM05D002722 ORTHO05D003076 2.3e-14 85.1 77 55.8
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 3.0e-14 84.7 49 81.6
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 3.0e-14 84.7 49 81.6
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 1.3e-12 79.3 47 74.5
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 3.7e-12 77.8 63 58.7
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 3.1e-11 74.7 59 61.0
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 4.1e-11 74.3 176 34.7
SHI50413 Sapria himalayana HOM05D003729 ORTHO05D004384 7.0e-11 73.6 204 34.8
Sabra16G0044400 Salix brachista HOM05D002722 ORTHO05D003076 5.9e-10 70.5 77 50.6
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-08 66.2 216 31.0
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-08 66.2 39 69.2
SHI40171 Sapria himalayana HOM05D003729 ORTHO05D004384 1.9e-08 65.5 71 56.3
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 7.2e-08 63.5 86 41.9
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 1.6e-07 62.4 34 73.5
Medtr8g007590 Medicago truncatula HOM05D003729 ORTHO05D004384 2.1e-07 62.0 36 66.7
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 8.0e-07 60.1 181 33.1


User provided reference genes

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