Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 8.9e-53 209.9 100 100.0
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 3.3e-39 164.9 100 75.0
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 4.3e-39 164.5 100 76.0
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 9.5e-39 163.3 100 74.0
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 9.5e-39 163.3 100 73.0
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 1.6e-38 162.5 100 74.0
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 2.8e-38 161.8 100 71.0
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 2.8e-38 161.8 100 72.0
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 3.6e-38 161.4 100 73.0
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 3.6e-38 161.4 100 72.0
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 3.6e-38 161.4 100 74.0
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 4.7e-38 161.0 100 74.0
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 4.7e-38 161.0 100 72.0
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 4.7e-38 161.0 100 72.0
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 4.7e-38 161.0 100 72.0
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 4.7e-38 161.0 100 73.0
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 8.1e-38 160.2 100 71.0
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 8.1e-38 160.2 100 70.0
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 8.1e-38 160.2 100 71.0
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 8.1e-38 160.2 99 73.7
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 8.1e-38 160.2 100 71.0
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 1.1e-37 159.8 100 70.0
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 1.4e-37 159.5 100 70.0
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 1.4e-37 159.5 100 71.0
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 1.4e-37 159.5 100 71.0
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 1.4e-37 159.5 100 71.0
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 1.8e-37 159.1 100 71.0
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 1.8e-37 159.1 100 71.0
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 1.8e-37 159.1 100 71.0
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 1.8e-37 159.1 100 70.0
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 1.8e-37 159.1 100 71.0
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 2.4e-37 158.7 101 72.3
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 3.1e-37 158.3 100 70.0
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 3.1e-37 158.3 100 71.0
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 3.1e-37 158.3 100 71.0
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 3.1e-37 158.3 100 70.0
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 4.0e-37 157.9 100 71.0
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 4.0e-37 157.9 100 72.0
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 4.0e-37 157.9 100 72.0
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 4.0e-37 157.9 100 73.0
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 4.0e-37 157.9 100 70.0
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 4.0e-37 157.9 98 72.4
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 5.2e-37 157.5 100 71.0
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 6.8e-37 157.1 100 69.0
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 8.9e-37 156.8 100 70.0
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 8.9e-37 156.8 100 70.0
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 8.9e-37 156.8 100 70.0
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 1.2e-36 156.4 100 69.0
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 1.2e-36 156.4 100 69.0
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 1.2e-36 156.4 100 70.0
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 1.5e-36 156.0 100 70.0
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 1.5e-36 156.0 100 70.0
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 1.5e-36 156.0 100 70.0
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 1.5e-36 156.0 100 70.0
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 1.5e-36 156.0 100 70.0
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 1.5e-36 156.0 100 70.0
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 1.5e-36 156.0 100 68.0
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 1.5e-36 156.0 100 69.0
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 2.0e-36 155.6 98 70.4
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 2.0e-36 155.6 100 70.0
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 2.0e-36 155.6 100 70.0
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 2.0e-36 155.6 99 69.7
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 2.0e-36 155.6 100 70.0
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 2.0e-36 155.6 100 70.0
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 2.0e-36 155.6 100 70.0
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 2.0e-36 155.6 100 72.0
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 2.6e-36 155.2 100 70.0
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 3.4e-36 154.8 101 69.3
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 3.4e-36 154.8 100 70.0
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 3.4e-36 154.8 102 69.6
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 3.4e-36 154.8 100 70.0
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 3.4e-36 154.8 100 68.0
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 4.4e-36 154.5 100 69.0
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 4.4e-36 154.5 101 70.3
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 5.8e-36 154.1 100 70.0
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 9.9e-36 153.3 100 68.0
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 1.3e-35 152.9 100 69.0
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 1.3e-35 152.9 102 68.6
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 1.7e-35 152.5 102 69.6
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.7e-35 152.5 100 69.0
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 2.2e-35 152.1 100 68.0
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 2.2e-35 152.1 98 68.4
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 2.2e-35 152.1 100 67.0
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 2.2e-35 152.1 100 68.0
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 2.2e-35 152.1 102 68.6
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 2.9e-35 151.8 100 68.0
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 4.9e-35 151.0 102 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 1.4e-34 149.4 101 65.3
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 5.4e-34 147.5 100 66.0
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 5.4e-34 147.5 100 66.0
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 5.4e-34 147.5 100 66.0
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 1.6e-33 146.0 100 65.0
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 1.6e-33 146.0 92 70.7
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 2.1e-33 145.6 100 65.0
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 2.7e-33 145.2 92 69.6
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 4.6e-33 144.4 92 67.4
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 6.0e-33 144.1 112 62.5
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 6.0e-33 144.1 100 66.0
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 7.8e-33 143.7 108 63.0
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 1.3e-32 142.9 93 69.9
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 3.9e-32 141.4 92 68.5
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 4.3e-31 137.9 91 67.0
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 3.6e-30 134.8 88 69.3
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 4.8e-30 134.4 100 58.0
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 2.0e-28 129.0 91 63.7
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 3.4e-28 128.3 87 67.8
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 3.8e-27 124.8 92 59.8
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 4.9e-27 124.4 100 60.0
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 4.2e-26 121.3 67 79.1
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 2.7e-25 118.6 65 75.4
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 5.1e-24 114.4 65 73.8
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 6.6e-24 114.0 69 68.1
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 6.6e-24 114.0 99 54.5
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 7.3e-23 110.5 101 49.5
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 2.6e-20 102.1 93 55.9
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 3.4e-20 101.7 74 60.8
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 2.2e-19 99.0 73 63.0
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 7.4e-15 84.0 61 65.6
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 4.0e-13 78.2 62 59.7
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 1.1e-10 70.1 53 62.3
SHI13486 Sapria himalayana HOM05D006419 ORTHO05D008096 2.5e-07 58.9 39 61.5


User provided reference genes

Program Settings