Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 8.1e-103 377.1 193 100.0
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 5.5e-59 231.5 151 76.2
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 7.2e-59 231.1 151 75.5
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 2.7e-58 229.2 151 76.2
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 6.1e-58 228.0 159 72.3
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 8.8e-57 224.2 148 77.0
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 1.1e-56 223.8 172 66.3
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 1.5e-56 223.4 148 77.0
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 1.5e-56 223.4 148 77.0
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 1.5e-56 223.4 172 66.3
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 3.3e-56 222.2 148 76.4
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 3.3e-56 222.2 185 67.0
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 4.4e-56 221.9 165 70.3
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 5.7e-56 221.5 150 77.3
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 9.7e-56 220.7 150 73.3
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 1.3e-55 220.3 160 71.9
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.3e-55 220.3 167 69.5
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 1.7e-55 219.9 151 74.2
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 1.7e-55 219.9 150 76.7
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 2.8e-55 219.2 149 73.2
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 3.7e-55 218.8 150 74.7
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 3.7e-55 218.8 169 68.0
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 4.8e-55 218.4 170 67.1
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 4.8e-55 218.4 150 74.0
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 4.8e-55 218.4 170 67.1
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 4.8e-55 218.4 170 67.1
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 4.8e-55 218.4 150 74.0
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 4.8e-55 218.4 153 71.9
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 4.8e-55 218.4 148 75.7
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 4.8e-55 218.4 167 68.9
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 4.8e-55 218.4 167 68.9
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 4.8e-55 218.4 162 68.5
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 4.8e-55 218.4 162 68.5
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 4.8e-55 218.4 158 71.5
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 6.3e-55 218.0 151 71.5
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 6.3e-55 218.0 151 71.5
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 6.3e-55 218.0 171 66.1
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 8.2e-55 217.6 164 68.3
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 1.1e-54 217.2 146 74.7
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 1.4e-54 216.9 150 72.7
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 1.4e-54 216.9 157 72.0
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 1.4e-54 216.9 162 69.1
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 1.4e-54 216.9 155 72.9
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 1.4e-54 216.9 156 72.4
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 1.4e-54 216.9 162 69.8
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 1.4e-54 216.9 151 75.5
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 1.8e-54 216.5 149 73.8
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 2.4e-54 216.1 149 74.5
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 2.4e-54 216.1 149 74.5
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 2.4e-54 216.1 149 73.2
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 2.4e-54 216.1 164 67.7
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 3.1e-54 215.7 158 72.2
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 3.1e-54 215.7 158 72.2
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 3.1e-54 215.7 149 73.8
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 5.3e-54 214.9 149 73.8
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 5.3e-54 214.9 147 74.8
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 5.3e-54 214.9 152 71.1
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 7.0e-54 214.5 167 68.3
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 7.0e-54 214.5 159 70.4
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 9.1e-54 214.2 158 70.3
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.6e-53 213.4 165 68.5
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 1.6e-53 213.4 151 72.2
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 3.5e-53 212.2 149 73.2
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 4.5e-53 211.8 149 71.1
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 4.5e-53 211.8 153 70.6
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 5.9e-53 211.5 149 70.5
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 5.9e-53 211.5 162 69.1
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 7.7e-53 211.1 161 68.9
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 7.7e-53 211.1 149 75.2
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 1.0e-52 210.7 123 82.9
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 1.0e-52 210.7 151 70.2
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 1.0e-52 210.7 151 72.2
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 1.0e-52 210.7 123 82.1
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 1.3e-52 210.3 150 72.0
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 1.3e-52 210.3 162 67.3
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 1.3e-52 210.3 162 67.9
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 2.2e-52 209.5 163 67.5
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 3.8e-52 208.8 123 81.3
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 5.0e-52 208.4 149 72.5
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 1.1e-51 207.2 172 64.5
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 1.1e-51 207.2 148 72.3
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 1.5e-51 206.8 144 73.6
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 1.5e-51 206.8 152 69.7
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.9e-51 206.5 123 78.9
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 7.2e-51 204.5 116 81.9
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 7.2e-51 204.5 151 72.2
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 9.4e-51 204.1 116 82.8
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 1.2e-50 203.8 153 71.2
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 2.7e-50 202.6 151 68.9
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 8.0e-50 201.1 138 71.7
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 8.0e-50 201.1 151 69.5
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 1.0e-49 200.7 151 67.5
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 1.8e-49 199.9 170 62.4
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 1.8e-49 199.9 170 62.9
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 1.2e-48 197.2 146 65.8
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 1.5e-48 196.8 150 68.7
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 1.5e-48 196.8 151 66.9
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 2.0e-48 196.4 153 66.0
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 2.0e-48 196.4 155 65.2
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 3.4e-48 195.7 123 78.0
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 4.4e-48 195.3 198 58.1
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 5.7e-48 194.9 152 67.1
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 7.5e-48 194.5 166 60.2
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 1.3e-47 193.7 157 66.2
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 1.3e-47 193.7 157 66.2
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 2.8e-47 192.6 157 65.6
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 2.8e-47 192.6 237 51.1
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 8.3e-47 191.0 147 64.6
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 1.8e-46 189.9 142 68.3
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 2.4e-46 189.5 155 62.6
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 4.1e-46 188.7 151 64.2
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 1.2e-45 187.2 126 75.4
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 1.2e-45 187.2 152 65.1
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 1.2e-45 187.2 148 64.2
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 1.2e-45 187.2 145 64.8
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 4.5e-45 185.3 127 74.8
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 5.9e-45 184.9 123 75.6
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 3.8e-44 182.2 146 69.9
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 2.1e-42 176.4 275 42.5
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 8.8e-41 171.0 273 41.0
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 9.8e-40 167.5 117 69.2
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 1.0e-36 157.5 142 59.9
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 3.8e-36 155.6 116 63.8
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 5.0e-36 155.2 156 57.1
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 2.3e-33 146.4 170 52.4
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 2.2e-31 139.8 109 58.7
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.1e-30 135.6 80 83.8
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 4.1e-30 135.6 82 79.3
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 5.4e-30 135.2 84 76.2
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 2.0e-29 133.3 84 77.4
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 1.0e-28 131.0 79 81.0
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 2.9e-28 129.4 79 79.7
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 1.9e-27 126.7 100 58.0
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 4.4e-24 115.5 113 50.4
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 7.5e-24 114.8 79 74.7
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 1.6e-21 107.1 84 66.7
CARHR096330 Cardamine hirsuta HOM05D005249 ORTHO05D006457 3.1e-17 92.8 86 58.1
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 6.4e-15 85.1 66 69.7
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 1.9e-14 83.6 66 68.2
Nn1g07101 Nelumbo nucifera HOM05D005249 ORTHO05D006457 4.1e-14 82.4 68 63.2
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 1.6e-13 80.5 51 70.6
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 1.9e-11 73.6 51 68.6
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 9.5e-11 71.2 62 51.6
Hund02097 Selenicereus undatus HOM05D000420 ORTHO05D000110 7.6e-08 61.6 74 48.6


User provided reference genes

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