Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 1.7e-287 991.9 478 100.0
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 3.8e-194 681.8 477 67.9
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 1.8e-188 662.9 481 65.7
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 7.7e-187 657.5 475 67.2
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 3.8e-186 655.2 426 71.4
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 5.5e-185 651.4 473 66.4
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 5.5e-185 651.4 469 67.2
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 3.0e-183 645.6 479 64.5
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 3.0e-183 645.6 405 74.3
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 7.5e-182 641.0 486 64.4
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 9.8e-182 640.6 416 71.6
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 2.2e-181 639.4 486 64.2
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 2.8e-181 639.0 420 70.5
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 2.8e-181 639.0 468 65.6
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 3.7e-181 638.6 425 70.1
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 3.7e-181 638.6 472 64.8
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 4.8e-181 638.3 476 65.1
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 1.1e-180 637.1 463 65.0
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 1.1e-180 637.1 472 65.7
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 2.4e-180 636.0 469 65.5
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 2.4e-180 636.0 481 64.0
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 7.0e-180 634.4 484 64.0
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 7.0e-180 634.4 472 64.0
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 2.0e-179 632.9 476 64.3
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 2.0e-179 632.9 468 65.2
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.0e-178 630.6 468 64.7
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 1.7e-178 629.8 416 70.9
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 8.5e-178 627.5 396 72.2
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 1.1e-177 627.1 469 65.2
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 1.9e-177 626.3 483 63.8
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 2.7e-176 622.5 479 63.9
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 1.8e-175 619.8 485 61.9
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 3.0e-175 619.0 396 72.2
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 1.5e-174 616.7 412 68.2
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 5.7e-174 614.8 473 61.5
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 1.3e-173 613.6 501 60.5
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 1.3e-173 613.6 434 67.3
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 1.3e-173 613.6 469 62.7
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 1.7e-173 613.2 441 67.1
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 2.8e-173 612.5 466 61.4
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 2.4e-172 609.4 462 63.6
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 2.4e-172 609.4 433 66.3
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 5.4e-172 608.2 471 63.3
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 5.4e-172 608.2 476 61.1
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 7.0e-172 607.8 469 61.8
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 9.1e-172 607.4 407 68.8
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 1.2e-171 607.1 473 63.0
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 1.6e-171 606.7 472 60.8
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 2.0e-171 606.3 414 67.4
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 2.7e-171 605.9 461 63.1
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 2.7e-171 605.9 472 61.0
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 2.7e-171 605.9 419 66.3
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 3.5e-171 605.5 463 63.5
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 3.5e-171 605.5 447 64.4
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 4.5e-171 605.1 473 60.3
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 4.5e-171 605.1 420 66.7
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 7.7e-171 604.4 463 63.5
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 7.7e-171 604.4 479 63.3
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.0e-170 604.0 414 68.8
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 1.0e-170 604.0 471 63.1
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 2.3e-170 602.8 419 66.3
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 1.9e-169 599.7 477 61.4
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 3.3e-169 599.0 415 68.7
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 5.6e-169 598.2 463 62.6
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 5.6e-169 598.2 463 62.6
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 7.2e-169 597.8 470 61.3
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 4.7e-168 595.1 413 67.3
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 8.0e-168 594.3 448 65.2
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 8.9e-167 590.9 470 60.2
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 1.2e-166 590.5 467 61.2
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 2.0e-166 589.7 407 67.3
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 2.0e-166 589.7 417 65.7
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 2.6e-166 589.3 427 65.1
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 3.4e-166 589.0 423 64.5
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 1.4e-164 583.6 469 60.3
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 1.8e-164 583.2 424 63.9
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 1.8e-164 583.2 453 60.7
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 3.5e-163 578.9 414 65.0
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 5.9e-163 578.2 486 58.4
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 1.1e-161 573.9 480 57.7
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 1.1e-161 573.9 393 67.4
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.1e-161 573.9 481 57.8
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 1.1e-161 573.9 429 64.3
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.9e-161 573.2 481 58.6
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.5e-161 572.8 487 58.9
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 3.4e-158 562.4 399 64.2
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 3.4e-158 562.4 412 64.8
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 1.3e-157 560.5 476 60.7
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 2.4e-156 556.2 381 64.3
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 7.0e-156 554.7 394 67.8
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 3.5e-155 552.4 408 62.3
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 3.5e-155 552.4 428 63.6
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 6.0e-155 551.6 464 59.3
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 1.5e-153 547.0 409 64.5
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 2.3e-151 539.7 417 60.4
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 8.9e-151 537.7 384 64.3
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 1.2e-150 537.3 353 69.1
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 2.0e-150 536.6 349 69.9
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 2.1e-147 526.6 353 70.3
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 6.0e-147 525.0 405 60.5
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 8.6e-146 521.2 358 69.8
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 1.5e-145 520.4 356 67.7
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 2.1e-139 500.0 324 71.3
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 2.7e-139 499.6 384 62.8
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.1e-136 490.0 413 58.4
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 6.6e-122 441.8 405 53.3
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.6e-120 437.2 404 51.5
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.3e-117 427.6 402 49.8
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.3e-117 427.6 405 49.4
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 1.5e-113 414.1 438 50.5
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 1.5e-113 414.1 323 63.8
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 2.6e-110 403.3 436 47.0
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 4.9e-109 399.1 260 72.7
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 2.4e-95 353.6 292 62.7
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 3.1e-95 353.2 244 66.4
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 2.7e-70 270.4 186 64.5
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 1.7e-69 267.7 229 61.6
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 2.5e-68 263.8 164 76.8
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 1.7e-64 251.1 160 68.8
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 7.7e-62 242.3 233 52.4
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 2.1e-59 234.2 161 68.9
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 2.5e-44 184.1 129 62.0
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 4.3e-44 183.3 118 67.8
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 7.8e-30 136.0 383 28.2
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.2e-27 128.6 374 27.8
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 2.3e-26 124.4 86 72.1
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 1.2e-22 112.1 435 26.9
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 2.1e-22 111.3 345 27.0
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.9e-12 78.2 236 29.7
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 5.3e-10 70.1 55 65.5
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 9.0e-10 69.3 80 55.0
Cre10.g462600 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 4.5e-09 67.0 112 38.4
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 1.3e-08 65.5 61 54.1
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 1.3e-08 65.5 61 54.1
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 1.1e-07 62.4 55 49.1
EL10Ac5g11353 Beta vulgaris HOM05D005705 ORTHO05D007152 1.9e-07 61.6 195 25.6


User provided reference genes

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