Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G012 Amborella trichopoda HOM05D002140 ORTHO05D064491 2.2e-41 171.8 81 100.0
Actinidia37353 Actinidia chinensis HOM05D002140 ORTHO05D002382 1.3e-06 56.2 45 55.6
PSO339G4383 Papaver somniferum HOM05D002140 ORTHO05D002382 1.3e-06 56.2 41 58.5
vmacro09145 Vaccinium macrocarpon HOM05D002140 ORTHO05D002382 2.3e-06 55.5 42 59.5
Hma1.2p1_0386F.1_g141790 Hydrangea macrophylla HOM05D002140 ORTHO05D002382 3.0e-06 55.1 41 61.0
TAR633G2813 Trochodendron aralioides HOM05D002140 ORTHO05D002382 3.0e-06 55.1 45 55.6
Zm00001eb052680 Zea mays HOM05D002140 ORTHO05D002382 3.0e-06 55.1 40 60.0
Actinidia38617 Actinidia chinensis HOM05D002140 ORTHO05D002382 3.9e-06 54.7 41 58.5
CSS0013302 Camellia sinensis var. sinensis HOM05D002140 ORTHO05D002382 3.9e-06 54.7 41 58.5
DCAR_016867 Daucus carota HOM05D002140 ORTHO05D002382 3.9e-06 54.7 41 58.5
Dinv13486 Davidia involucrata HOM05D002140 ORTHO05D002382 3.9e-06 54.7 41 58.5
Dinv37008 Davidia involucrata HOM05D002140 ORTHO05D002382 3.9e-06 54.7 41 58.5
Nn7g35830 Nelumbo nucifera HOM05D002140 ORTHO05D002382 3.9e-06 54.7 41 58.5
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 3.9e-06 54.7 41 58.5
CANSAT25G2162 Cannabis sativa HOM05D002140 ORTHO05D002382 5.1e-06 54.3 41 58.5
ECA236G4430 Erigeron canadensis HOM05D002140 ORTHO05D002382 5.1e-06 54.3 41 58.5
FvH4_1g28010 Fragaria vesca HOM05D002140 ORTHO05D002382 5.1e-06 54.3 40 60.0
FAN19G0703 Fragaria x ananassa HOM05D002140 ORTHO05D002382 5.1e-06 54.3 40 60.0
MD12G1002700 Malus domestica HOM05D002140 ORTHO05D002382 5.1e-06 54.3 40 60.0
MD14G1002000 Malus domestica HOM05D002140 ORTHO05D002382 5.1e-06 54.3 40 60.0
Rhsim13G0234100 Rhododendron simsii HOM05D002140 ORTHO05D002382 5.1e-06 54.3 41 58.5
RcHm_v2.0_Chr3g0497421 Rosa chinensis HOM05D002140 ORTHO05D002382 5.1e-06 54.3 40 60.0
unitig_37.g13064 Utricularia gibba HOM05D002140 ORTHO05D002382 5.1e-06 54.3 48 50.0
GSVIVG01025497001 Vitis vinifera HOM05D002140 ORTHO05D002382 5.1e-06 54.3 41 58.5
Aa31LG10G730 Aethionema arabicum HOM05D002140 ORTHO05D002382 6.6e-06 53.9 40 60.0
Lsat_1_v5_gn_7_91520 Lactuca sativa HOM05D002140 ORTHO05D002382 6.6e-06 53.9 42 54.8
QL01p010469 Quercus lobata HOM05D002140 ORTHO05D002382 6.6e-06 53.9 41 58.5
Actinidia22092 Actinidia chinensis HOM05D002140 ORTHO05D002382 8.6e-06 53.5 41 58.5
ATR0749G036 Amborella trichopoda HOM05D002140 ORTHO05D002382 8.6e-06 53.5 41 56.1
ATR0827G027 Amborella trichopoda HOM05D002140 ORTHO05D002382 8.6e-06 53.5 41 56.1
Aqoxy5G04361 Aquilegia oxysepala HOM05D002140 ORTHO05D002382 8.6e-06 53.5 41 56.1
Aqoxy7G00924 Aquilegia oxysepala HOM05D002140 ORTHO05D002382 8.6e-06 53.5 41 56.1
EL10Ac9g21802 Beta vulgaris HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
BcaB02g10818 Brassica carinata HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
BcaC08g44201 Brassica carinata HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
A05p17440 Brassica napus HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
C06p16090 Brassica napus HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
BolC6t36808H Brassica oleracea HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
BraA05t20639Z Brassica rapa HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
CANSAT21G0818 Cannabis sativa HOM05D002140 ORTHO05D002382 8.6e-06 53.5 45 53.3
CAN.G245.1 Capsicum annuum HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
CDE05G3016 Ceratophyllum demersum HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
ECA240G1881 Erigeron canadensis HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
FAN23G1243 Fragaria x ananassa HOM05D002140 ORTHO05D002382 8.6e-06 53.5 39 61.5
FAN26G1633 Fragaria x ananassa HOM05D002140 ORTHO05D002382 8.6e-06 53.5 39 61.5
FAN28G1683 Fragaria x ananassa HOM05D002140 ORTHO05D002382 8.6e-06 53.5 39 61.5
FAN28G2179 Fragaria x ananassa HOM05D002140 ORTHO05D002382 8.6e-06 53.5 39 61.5
HanXRQChr10g0304991 Helianthus annuus HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
Lsat_1_v5_gn_9_108101 Lactuca sativa HOM05D002140 ORTHO05D002382 8.6e-06 53.5 41 56.1
Lj2A357G78 Lonicera japonica HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 8.6e-06 53.5 41 56.1
Nitab4.5_0000001g0040 Nicotiana tabacum HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
Nitab4.5_0000911g0050 Nicotiana tabacum HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
PSO170G4543 Papaver somniferum HOM05D002140 ORTHO05D002382 8.6e-06 53.5 41 56.1
Hund05839 Selenicereus undatus HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
SGA_v2.0_scaffold3G01690 Striga asiatica HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
SGA_v2.0_scaffold6G03327 Striga asiatica HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0
Zm00001eb218190 Zea mays HOM05D002140 ORTHO05D002382 8.6e-06 53.5 40 60.0


User provided reference genes

Program Settings