Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 2.2e-99 367.5 409 100.0
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 1.7e-27 128.6 159 44.7
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 2.5e-26 124.8 394 53.3
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 7.1e-26 123.2 136 41.9
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 2.1e-25 121.7 418 53.6
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 2.7e-25 121.3 399 54.1
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 6.0e-25 120.2 392 55.6
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 3.0e-24 117.9 397 54.7
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 6.7e-24 116.7 396 54.0
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 1.1e-23 115.9 393 55.2
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 1.9e-23 115.2 401 53.6
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 1.9e-23 115.2 404 53.2
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 3.3e-23 114.4 417 52.8
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 4.3e-23 114.0 399 52.6
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 4.3e-23 114.0 392 54.6
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 9.6e-23 112.8 398 55.0
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 1.3e-22 112.5 143 43.4
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 1.3e-22 112.5 407 52.8
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 1.3e-22 112.5 398 54.8
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 1.6e-22 112.1 399 54.1
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.6e-22 112.1 144 41.7
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.6e-22 112.1 144 41.7
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 2.1e-22 111.7 393 53.9
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 2.8e-22 111.3 144 45.1
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 4.8e-22 110.5 398 54.8
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 4.8e-22 110.5 404 52.2
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 6.2e-22 110.2 394 53.3
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 6.2e-22 110.2 397 53.1
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 8.2e-22 109.8 400 54.5
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 8.2e-22 109.8 397 53.1
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 1.1e-21 109.4 405 52.3
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.1e-21 109.4 398 52.0
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 1.1e-21 109.4 401 54.6
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 1.4e-21 109.0 403 51.9
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 1.8e-21 108.6 394 54.3
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 4.0e-21 107.5 158 40.5
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 6.9e-21 106.7 398 53.3
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 6.9e-21 106.7 398 53.5
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 6.9e-21 106.7 422 51.9
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 6.9e-21 106.7 149 41.6
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 1.2e-20 105.9 416 52.6
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 1.2e-20 105.9 422 52.1
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.2e-20 105.9 149 42.3
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.5e-20 105.5 147 40.1
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 1.5e-20 105.5 143 37.8
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 1.5e-20 105.5 142 45.8
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 1.5e-20 105.5 400 51.2
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 2.0e-20 105.1 404 51.5
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.0e-20 105.1 144 41.7
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.6e-20 104.8 144 41.7
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 3.4e-20 104.4 401 53.4
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 3.4e-20 104.4 130 44.6
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 4.5e-20 104.0 404 53.0
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 5.8e-20 103.6 418 51.7
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 5.8e-20 103.6 142 45.1
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 5.8e-20 103.6 131 43.5
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 7.6e-20 103.2 142 45.1
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 7.6e-20 103.2 155 41.3
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 7.6e-20 103.2 400 51.5
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 7.6e-20 103.2 172 40.7
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 1.0e-19 102.8 149 43.0
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.0e-19 102.8 418 51.0
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.0e-19 102.8 122 45.1
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 1.0e-19 102.8 412 51.0
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 1.0e-19 102.8 399 52.4
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 1.0e-19 102.8 149 41.6
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 1.3e-19 102.4 148 40.5
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.7e-19 102.1 122 45.1
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 2.2e-19 101.7 388 52.8
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 2.9e-19 101.3 128 43.0
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 2.9e-19 101.3 142 44.4
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 2.9e-19 101.3 142 45.1
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 2.9e-19 101.3 142 45.1
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 2.9e-19 101.3 115 48.7
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 3.8e-19 100.9 147 41.5
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 4.9e-19 100.5 167 40.7
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 4.9e-19 100.5 406 51.7
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 8.4e-19 99.8 150 39.3
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 8.4e-19 99.8 152 40.8
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 1.4e-18 99.0 164 40.2
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 1.4e-18 99.0 152 40.8
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 1.2e-17 95.9 157 38.2
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 3.5e-17 94.4 115 47.8
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 3.5e-17 94.4 170 40.0
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 3.5e-17 94.4 151 39.1
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 6.0e-17 93.6 399 51.4
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 1.8e-16 92.0 156 39.7
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 3.0e-16 91.3 155 34.8
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 3.9e-16 90.9 142 39.4
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 4.3e-15 87.4 59 66.1
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 9.7e-15 86.3 156 37.2
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 1.3e-14 85.9 127 37.0
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 2.2e-14 85.1 58 62.1
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.4e-13 82.4 59 59.3
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 5.3e-13 80.5 59 61.0
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 5.3e-13 80.5 59 57.6
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 5.3e-13 80.5 59 57.6
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 6.9e-13 80.1 59 59.3
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 6.9e-13 80.1 59 61.0
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 2.6e-12 78.2 156 35.9
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 2.2e-11 75.1 59 59.3
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 6.5e-11 73.6 59 52.5
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 1.9e-10 72.0 110 41.8
SEGI_13247 Sequoiadendron giganteum HOM05D000238 ORTHO05D005437 8.2e-06 56.6 97 26.8


User provided reference genes

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