Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0745G019 Amborella trichopoda HOM05D006097 ORTHO05D008538 0.0e+00 1164.1 577 100.0
Dinv22036 Davidia involucrata HOM05D006097 ORTHO05D008538 2.3e-225 785.8 572 66.8
GSVIVG01013488001 Vitis vinifera HOM05D006097 ORTHO05D008538 2.8e-223 778.9 579 65.1
PSO339G1331 Papaver somniferum HOM05D006097 ORTHO05D008538 3.6e-223 778.5 579 64.2
Haze_03039 Corylus avellana HOM05D006097 ORTHO05D008538 5.2e-222 774.6 538 69.0
QL04p017855 Quercus lobata HOM05D006097 ORTHO05D008538 1.5e-221 773.1 538 68.2
CiPaw.14G007600 Carya illinoinensis HOM05D006097 ORTHO05D008538 5.4e-219 764.6 561 65.4
Prupe.2G036100 Prunus persica HOM05D006097 ORTHO05D008538 1.7e-217 759.6 575 63.3
Actinidia21518 Actinidia chinensis HOM05D006097 ORTHO05D008538 6.6e-217 757.7 539 67.5
Ciclev10004623m.g Citrus clementina HOM05D006097 ORTHO05D008538 6.6e-217 757.7 536 66.6
Nn2g14836 Nelumbo nucifera HOM05D006097 ORTHO05D008538 1.5e-216 756.5 567 65.6
Peaxi162Scf00767g00518 Petunia axillaris HOM05D006097 ORTHO05D008538 1.5e-216 756.5 537 67.2
Hund13358 Selenicereus undatus HOM05D006097 ORTHO05D008538 9.5e-216 753.8 568 64.6
Cfa010917 Carpinus fangiana HOM05D006097 ORTHO05D008538 1.2e-215 753.4 569 65.0
COL.COLO4_20657 Corchorus olitorius HOM05D006097 ORTHO05D008538 1.6e-215 753.1 574 63.8
MD07G1040200 Malus domestica HOM05D006097 ORTHO05D008538 2.1e-215 752.7 575 63.5
Gohir.D06G184900 Gossypium hirsutum HOM05D006097 ORTHO05D008538 2.8e-215 752.3 575 64.2
Gohir.A06G175000 Gossypium hirsutum HOM05D006097 ORTHO05D008538 3.1e-214 748.8 575 63.5
Gorai.010G216200 Gossypium raimondii HOM05D006097 ORTHO05D008538 4.0e-214 748.4 577 64.0
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 4.0e-214 748.4 537 66.7
HanXRQChr04g0113861 Helianthus annuus HOM05D006097 ORTHO05D008538 1.2e-213 746.9 537 65.4
Atru.chr7.628 Acer truncatum HOM05D006097 ORTHO05D008538 2.0e-213 746.1 536 65.5
THA.LOC104826726 Tarenaya hassleriana HOM05D006097 ORTHO05D008538 4.4e-213 745.0 537 65.5
Potri.003G196300 Populus trichocarpa HOM05D006097 ORTHO05D008538 1.7e-212 743.0 570 63.5
Nitab4.5_0001621g0010 Nicotiana tabacum HOM05D006097 ORTHO05D008538 4.9e-212 741.5 542 65.7
Lj3g0013868 Lotus japonicus HOM05D006097 ORTHO05D008538 4.1e-211 738.4 536 66.0
Duzib114G0946 Durio zibethinus HOM05D006097 ORTHO05D008538 7.1e-211 737.6 574 62.4
Thecc.10G154600 Theobroma cacao HOM05D006097 ORTHO05D008538 9.2e-211 737.3 574 62.5
Psat5g221440 Pisum sativum HOM05D006097 ORTHO05D008538 2.7e-210 735.7 536 65.7
Ah.12g062830 Amaranthus hybridus HOM05D006097 ORTHO05D008538 1.0e-209 733.8 534 65.5
PGR031G1965 Punica granatum HOM05D006097 ORTHO05D008538 1.7e-209 733.0 579 61.3
Manes.04G159300 Manihot esculenta HOM05D006097 ORTHO05D008538 1.1e-208 730.3 556 63.7
RcHm_v2.0_Chr1g0324291 Rosa chinensis HOM05D006097 ORTHO05D008538 1.1e-208 730.3 566 62.7
SGA_v2.0_scaffold232G43504 Striga asiatica HOM05D006097 ORTHO05D008538 1.5e-208 729.9 574 62.0
AUR62032650 Chenopodium quinoa HOM05D006097 ORTHO05D008538 1.9e-208 729.6 571 62.3
FAN01G0546 Fragaria x ananassa HOM05D006097 ORTHO05D008538 1.9e-208 729.6 539 64.6
ECA236G3136 Erigeron canadensis HOM05D006097 ORTHO05D008538 2.5e-208 729.2 570 60.5
Migut.N01845 Erythranthe guttata HOM05D006097 ORTHO05D008538 3.3e-208 728.8 536 64.4
TPR.G17806 Trifolium pratense HOM05D006097 ORTHO05D008538 9.6e-208 727.2 551 63.3
Thhalv10010237m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 1.2e-207 726.9 537 64.6
Glyma.13G197200 Glycine max HOM05D006097 ORTHO05D008538 2.8e-207 725.7 537 64.8
Lalb_Chr19g0132421 Lupinus albus HOM05D006097 ORTHO05D008538 2.8e-207 725.7 574 62.5
Medtr3g014750 Medicago truncatula HOM05D006097 ORTHO05D008538 3.6e-207 725.3 571 62.3
BraA04t16135Z Brassica rapa HOM05D006097 ORTHO05D008538 1.1e-206 723.8 537 63.9
Sopen08g005450 Solanum pennellii HOM05D006097 ORTHO05D008538 1.1e-206 723.8 574 61.5
AL5G37140 Arabidopsis lyrata HOM05D006097 ORTHO05D008538 1.4e-206 723.4 537 64.1
BcaB02g08396 Brassica carinata HOM05D006097 ORTHO05D008538 1.4e-206 723.4 537 64.6
Os01g0952700 Oryza sativa ssp. japonica HOM05D006097 ORTHO05D008538 1.4e-206 723.4 577 60.0
C04p36530 Brassica napus HOM05D006097 ORTHO05D008538 2.4e-206 722.6 537 64.1
Aqoxy2G00367 Aquilegia oxysepala HOM05D006097 ORTHO05D008538 3.1e-206 722.2 514 67.7
CANSAT56G2143 Cannabis sativa HOM05D006097 ORTHO05D008538 3.1e-206 722.2 535 63.0
BcaC02g09793 Brassica carinata HOM05D006097 ORTHO05D008538 9.0e-206 720.7 537 63.9
Cc02_g30220 Coffea canephora HOM05D006097 ORTHO05D008538 1.5e-205 719.9 537 64.2
Sabra03G0146400 Salix brachista HOM05D006097 ORTHO05D008538 2.0e-205 719.5 616 58.3
Sp5g06630 Schrenkiella parvula HOM05D006097 ORTHO05D008538 3.4e-205 718.8 537 63.9
A04p04190 Brassica napus HOM05D006097 ORTHO05D008538 7.6e-205 717.6 537 63.7
SalBow6G4726 Salvia bowleyana HOM05D006097 ORTHO05D008538 9.9e-205 717.2 613 58.7
CAN.G176.2 Capsicum annuum HOM05D006097 ORTHO05D008538 1.7e-204 716.5 537 63.5
BolC4t25143H Brassica oleracea HOM05D006097 ORTHO05D008538 5.4e-203 711.4 555 62.0
CsaV3_5G036770 Cucumis sativus L. HOM05D006097 ORTHO05D008538 7.1e-203 711.1 537 63.1
Carub.0005s2263 Capsella rubella HOM05D006097 ORTHO05D008538 1.6e-202 709.9 537 62.9
AUR62026861 Chenopodium quinoa HOM05D006097 ORTHO05D008538 1.6e-202 709.9 569 61.7
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 4.6e-202 708.4 532 63.2
Aa31LG10G10820 Aethionema arabicum HOM05D006097 ORTHO05D008538 7.8e-202 707.6 537 63.9
SEGI_19069 Sequoiadendron giganteum HOM05D006097 ORTHO05D008538 5.6e-200 701.4 578 59.5
HPP92_013975 Vanilla planifolia HOM05D006097 ORTHO05D008538 9.6e-200 700.7 574 58.7
CSS0004732 Camellia sinensis var. sinensis HOM05D006097 ORTHO05D008538 3.6e-199 698.7 561 61.0
EL10Ac2g02801 Beta vulgaris HOM05D006097 ORTHO05D008538 9.0e-198 694.1 654 54.6
CARHR165960 Cardamine hirsuta HOM05D006097 ORTHO05D008538 2.6e-197 692.6 570 59.8
arahy.Tifrunner.gnm1.ann1.HF4B4K Arachis hypogaea HOM05D006097 ORTHO05D008538 4.2e-195 685.3 588 58.5
Eucgr.G03235 Eucalyptus grandis HOM05D006097 ORTHO05D008538 2.6e-189 666.0 539 59.4
Sc07g0002170 Simmondsia chinensis HOM05D006097 ORTHO05D008538 2.4e-187 659.4 462 67.5
ClCG05G026810 Citrullus lanatus HOM05D006097 ORTHO05D008538 7.1e-187 657.9 546 59.5
Hma1.2p1_1627F.1_g294440 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 3.3e-184 649.0 463 67.8
Phvul.011G206500 Phaseolus vulgaris HOM05D006097 ORTHO05D008538 2.4e-182 642.9 480 63.8
PGSC0003DMG400025223 Solanum tuberosum HOM05D006097 ORTHO05D008538 4.5e-181 638.6 460 65.4
Solyc08g014470.4 Solanum lycopersicum HOM05D006097 ORTHO05D008538 1.3e-180 637.1 460 65.4
DCAR_031244 Daucus carota HOM05D006097 ORTHO05D008538 6.0e-178 628.2 460 64.6
MBI19_g07612_MAGBIO Magnolia biondii HOM05D006097 ORTHO05D008538 2.2e-175 619.8 532 59.4
AT3G55850 Arabidopsis thaliana HOM05D006097 ORTHO05D008538 7.4e-168 594.7 462 62.1
MELO3C012474.2 Cucumis melo HOM05D006097 ORTHO05D008538 2.0e-165 586.6 435 64.1
arahy.Tifrunner.gnm1.ann1.RMFD7W Arachis hypogaea HOM05D006097 ORTHO05D008538 2.2e-164 583.2 616 51.5
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 1.4e-163 580.5 541 55.8
Hma1.2p1_1627F.1_g294450 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 3.0e-161 572.8 463 61.8
unitig_52.g17390 Utricularia gibba HOM05D006097 ORTHO05D008538 5.3e-158 562.0 511 55.6
QL04p017846 Quercus lobata HOM05D006097 ORTHO05D008538 3.4e-157 559.3 398 65.8
Mapoly0021s0162 Marchantia polymorpha HOM05D006097 ORTHO05D008538 1.4e-155 553.9 539 50.1
SMO367G1089 Selaginella moellendorffii HOM05D006097 ORTHO05D008538 7.2e-155 551.6 564 48.6
Sed0002543 Sechium edule HOM05D006097 ORTHO05D008538 3.7e-151 539.3 556 52.2
Pp3c20_1490 Physcomitrium patens HOM05D006097 ORTHO05D008538 1.9e-147 526.9 571 47.3
AagrBONN_evm.TU.Sc2ySwM_340.253 Anthoceros agrestis HOM05D006097 ORTHO05D008538 5.9e-141 505.4 536 47.6
TAR623G0406 Trochodendron aralioides HOM05D006097 ORTHO05D008538 3.8e-140 502.7 351 68.9
AUR62037188 Chenopodium quinoa HOM05D006097 ORTHO05D008538 4.4e-136 489.2 395 60.8
Oeu048573.1 Olea europaea HOM05D006097 ORTHO05D008538 2.3e-129 466.8 322 67.4
Glyma.15G235400 Glycine max HOM05D006097 ORTHO05D008538 6.3e-127 458.8 517 47.4
CDE06G1230 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 3.3e-123 446.4 357 59.9
Ca_26912_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 2.5e-115 420.2 296 66.6
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 2.4e-102 377.1 539 40.3
Thhalv10010899m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 3.5e-101 373.2 270 63.0
vmacro12697 Vaccinium macrocarpon HOM05D006097 ORTHO05D008538 2.5e-99 367.1 267 65.5
VMungo1127G1698 Vigna mungo HOM05D006097 ORTHO05D008538 2.4e-97 360.5 271 64.2
MCO06G284 Micromonas commoda HOM05D006097 ORTHO05D008538 8.7e-92 342.0 568 38.4
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 1.2e-90 338.2 520 40.4
Zm00001eb140700 Zea mays HOM05D006097 ORTHO05D008538 1.2e-90 338.2 249 64.3
Lj9A654G51 Lonicera japonica HOM05D006097 ORTHO05D008538 1.3e-87 328.2 238 64.3
FAN10G0529 Fragaria x ananassa HOM05D006097 ORTHO05D008538 2.4e-86 323.9 692 32.2
Cre06.g279350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 3.4e-72 276.9 454 36.1
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 2.7e-69 267.3 478 36.0
TAR623G0702 Trochodendron aralioides HOM05D006097 ORTHO05D008538 1.5e-64 251.5 192 66.1
VMungo1127G1548 Vigna mungo HOM05D006097 ORTHO05D008538 4.5e-64 250.0 176 65.9
Cre07.g313350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 4.1e-57 226.9 544 30.7
Pp3s32_630 Physcomitrium patens HOM05D006097 ORTHO05D008538 4.2e-54 216.9 543 30.6
PRCOL_00006109 Prasinoderma coloniale HOM05D006097 ORTHO05D008538 2.2e-50 204.5 397 36.5
Lj9A654T55 Lonicera japonica HOM05D006097 ORTHO05D008538 1.4e-49 201.8 136 65.4
QL04p017840 Quercus lobata HOM05D006097 ORTHO05D008538 4.8e-42 176.8 123 69.1
CDE06G0927 Ceratophyllum demersum HOM05D006097 ORTHO05D020391 1.2e-29 135.6 103 67.0
Ca_03883_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 2.0e-27 128.3 97 63.9
CDE06G2151 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 2.4e-25 121.3 82 65.9
Medtr1224s0010 Medicago truncatula HOM05D006097 ORTHO05D008538 1.6e-24 118.6 538 26.2
Nn2g16009 Nelumbo nucifera HOM05D006097 ORTHO05D008538 1.8e-20 105.1 84 57.1
SMO274G0019 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 4.0e-20 104.0 120 43.3
DCAR_031243 Daucus carota HOM05D006097 ORTHO05D020391 6.8e-20 103.2 77 59.7
SMO197G0087 Selaginella moellendorffii HOM05D003320 ORTHO05D003941 2.0e-19 101.7 113 44.2
SMO125G0001 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 3.7e-18 97.4 156 35.9
SMO212G0005 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 1.1e-17 95.9 115 43.5
SMO009G0029 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 7.0e-17 93.2 113 44.2
SEGI_33421 Sequoiadendron giganteum HOM05D006097 ORTHO05D020391 2.0e-16 91.7 116 46.6
SMO005G0015 Selaginella moellendorffii HOM05D006097 ORTHO05D011308 3.5e-16 90.9 105 43.8
RcHm_v2.0_Chr6g0254811 Rosa chinensis HOM05D006097 ORTHO05D020391 2.3e-15 88.2 56 66.1
Carub.0002s2671 Capsella rubella HOM05D006097 ORTHO05D008538 1.1e-14 85.9 53 64.2
CDE06G1678 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 2.8e-10 71.2 69 53.6
Nn313s46297 Nelumbo nucifera HOM05D006097 ORTHO05D008538 7.8e-08 63.2 46 63.0
Haze_01792 Corylus avellana HOM05D000242 ORTHO05D000700 1.1e-06 59.3 32 78.1
Hma1.2p1_0269F.1_g107740 Hydrangea macrophylla HOM05D006097 ORTHO05D020391 1.1e-06 59.3 38 65.8
Hma1.2p1_3244F.1_g334325 Hydrangea macrophylla HOM05D006097 ORTHO05D020391 1.1e-06 59.3 38 65.8
BolC8t50740H Brassica oleracea HOM05D035890 ORTHO05D033370 9.5e-06 56.2 43 58.1


User provided reference genes

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