Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 2.7e-283 978.0 496 100.0
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 5.6e-148 528.5 433 62.4
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.6e-147 526.9 433 62.4
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.1e-147 526.6 487 56.3
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 6.2e-147 525.0 476 57.6
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 3.1e-146 522.7 471 58.6
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 5.2e-146 521.9 496 56.9
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.5e-145 520.4 487 56.9
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 2.0e-145 520.0 498 56.0
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 3.4e-145 519.2 488 56.6
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 4.4e-145 518.8 419 62.5
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 9.9e-145 517.7 479 57.6
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.1e-143 514.2 466 55.8
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.4e-143 513.8 479 56.6
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 1.4e-143 513.8 430 60.0
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 7.1e-143 511.5 491 56.6
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 9.3e-143 511.1 437 62.0
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 6.0e-142 508.4 457 57.8
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 6.0e-142 508.4 488 56.1
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 1.7e-141 506.9 467 56.5
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 2.3e-141 506.5 441 59.9
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.9e-141 505.8 426 60.1
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 4.3e-140 502.3 467 57.2
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 5.6e-140 501.9 426 59.4
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 7.3e-140 501.5 419 59.4
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 9.6e-140 501.1 467 57.2
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 8.1e-139 498.0 483 54.5
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.1e-138 497.7 419 59.4
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 2.0e-137 493.4 474 55.3
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 3.4e-137 492.7 467 56.5
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 4.5e-137 492.3 488 54.9
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 5.8e-137 491.9 422 59.7
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 2.9e-136 489.6 448 56.2
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 6.4e-136 488.4 488 54.5
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 6.4e-136 488.4 448 56.0
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 3.2e-135 486.1 442 57.7
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 5.4e-135 485.3 492 53.5
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.1e-135 485.0 419 58.5
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 9.3e-135 484.6 468 55.3
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 9.3e-135 484.6 447 55.9
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.6e-134 483.8 427 58.1
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 6.0e-134 481.9 426 56.3
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 7.9e-134 481.5 492 52.6
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 1.0e-133 481.1 434 56.7
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 2.3e-133 479.9 442 56.8
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.0e-133 479.6 420 59.5
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 5.1e-133 478.8 429 56.2
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 6.7e-133 478.4 422 57.6
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 6.7e-133 478.4 374 63.9
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 8.7e-133 478.0 434 56.5
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 1.1e-132 477.6 498 52.4
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.5e-132 477.2 418 57.7
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.5e-132 477.2 414 56.5
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 1.5e-132 477.2 495 51.5
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 3.3e-132 476.1 447 55.9
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 5.6e-132 475.3 420 56.4
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 7.4e-132 474.9 415 58.1
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 7.4e-132 474.9 429 56.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 9.6e-132 474.6 426 58.2
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 9.6e-132 474.6 425 56.7
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.3e-131 474.2 420 56.9
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 1.6e-131 473.8 420 56.9
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.6e-131 473.8 445 54.4
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.6e-131 473.8 433 57.3
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 2.8e-131 473.0 423 57.0
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 6.2e-131 471.9 482 52.7
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 6.2e-131 471.9 453 54.1
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 6.2e-131 471.9 429 56.2
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.1e-130 471.1 431 55.2
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.1e-130 471.1 465 54.4
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.8e-130 470.3 447 53.9
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 3.1e-130 469.5 477 52.8
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 4.0e-130 469.2 528 51.7
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 5.3e-130 468.8 425 55.3
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 3.4e-129 466.1 456 54.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 1.3e-128 464.2 434 55.1
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.9e-128 462.2 406 56.7
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 6.0e-126 455.3 419 56.1
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 7.9e-126 454.9 416 58.2
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 1.0e-125 454.5 370 61.9
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 2.5e-124 449.9 424 55.2
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 4.3e-124 449.1 394 57.6
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 6.2e-123 445.3 426 54.0
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 4.5e-121 439.1 426 55.2
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.0e-120 438.0 429 52.9
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 8.4e-120 434.9 474 50.4
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.0e-117 427.9 394 54.1
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 5.7e-116 422.2 390 56.4
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 2.1e-115 420.2 455 49.9
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 9.0e-114 414.8 419 53.9
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 3.8e-112 409.5 370 55.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 2.5e-111 406.8 455 48.6
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 4.8e-107 392.5 368 52.7
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 4.1e-106 389.4 429 45.5
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.3e-106 389.0 419 50.6
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 1.2e-105 387.9 356 58.4
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 1.9e-103 380.6 432 45.8
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.0e-101 373.2 422 48.6
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.9e-95 354.0 422 47.9
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 5.2e-93 345.9 424 42.0
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 5.5e-87 325.9 285 58.9
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 5.2e-85 319.3 405 41.7
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-81 307.8 302 52.6
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.5e-79 299.3 392 44.1
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.5e-71 273.9 222 59.0
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 2.8e-62 243.8 256 50.8
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.5e-60 238.0 274 47.8
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.2e-57 228.4 233 51.5
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 4.0e-53 213.4 221 49.3
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 6.4e-51 206.1 449 33.0
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.0e-40 172.2 459 31.6
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.9e-35 154.1 148 56.1
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 6.0e-33 146.4 121 62.0
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 2.5e-31 141.0 100 66.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.5e-31 141.0 407 29.0
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.4e-28 130.6 144 48.6
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 5.8e-28 129.8 98 61.2
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 5.6e-23 113.2 115 50.4
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.8e-22 110.9 90 57.8
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.8e-22 110.2 87 60.9
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 6.9e-21 106.3 129 48.8
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 6.9e-13 79.7 53 67.9
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.2e-12 79.0 65 67.7
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 6.4e-11 73.2 76 53.9
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.4e-10 71.2 68 52.9
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 3.9e-08 63.9 68 55.9


User provided reference genes

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