Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G011 Amborella trichopoda HOM05D002407 ORTHO05D002476 0.0e+00 1934.5 1047 100.0
CDE08G0117 Ceratophyllum demersum HOM05D002407 ORTHO05D002476 1.9e-81 308.5 874 34.0
ATR0332G080 Amborella trichopoda HOM05D002407 ORTHO05D002476 4.0e-63 247.7 836 32.5
TAR362G1005 Trochodendron aralioides HOM05D002407 ORTHO05D002476 6.2e-56 223.8 783 32.7
arahy.Tifrunner.gnm1.ann1.C339P9 Arachis hypogaea HOM05D002407 ORTHO05D002476 1.7e-45 189.1 765 30.6
arahy.Tifrunner.gnm1.ann1.GGU5D9 Arachis hypogaea HOM05D002407 ORTHO05D002476 1.4e-44 186.0 765 30.5
Lj5g0016334 Lotus japonicus HOM05D002407 ORTHO05D002476 1.4e-44 186.0 771 30.0
Haze_00920 Corylus avellana HOM05D002407 ORTHO05D002476 1.9e-44 185.7 782 30.6
MBI04_g44890_MAGBIO Magnolia biondii HOM05D002407 ORTHO05D002476 1.9e-44 185.7 827 30.1
CiPaw.02G096000 Carya illinoinensis HOM05D002407 ORTHO05D002476 5.5e-44 184.1 787 29.6
Dinv38434 Davidia involucrata HOM05D002407 ORTHO05D002476 4.6e-43 181.0 810 30.6
Duzib052G1002 Durio zibethinus HOM05D002407 ORTHO05D002476 4.6e-43 181.0 817 30.6
Nn1g02265 Nelumbo nucifera HOM05D002407 ORTHO05D002476 2.5e-41 175.3 794 30.0
Phvul.007G055400 Phaseolus vulgaris HOM05D002407 ORTHO05D002476 2.5e-41 175.3 763 30.4
MD13G1190800 Malus domestica HOM05D002407 ORTHO05D002476 4.3e-41 174.5 779 32.3
Sed0021914 Sechium edule HOM05D002407 ORTHO05D002476 5.7e-41 174.1 764 30.4
CsaV3_6G038190 Cucumis sativus L. HOM05D002407 ORTHO05D002476 3.7e-40 171.4 907 28.2
MELO3C014484.2 Cucumis melo HOM05D002407 ORTHO05D002476 6.3e-40 170.6 840 29.6
MD16G1191200 Malus domestica HOM05D002407 ORTHO05D002476 8.2e-40 170.2 764 30.8
Nn4g26275 Nelumbo nucifera HOM05D002407 ORTHO05D002476 1.4e-39 169.5 822 30.7
Oeu041218.1 Olea europaea HOM05D002407 ORTHO05D002476 5.3e-39 167.5 807 29.7
GSVIVG01001149001 Vitis vinifera HOM05D002407 ORTHO05D002476 5.3e-39 167.5 749 31.4
Prupe.1G011200 Prunus persica HOM05D002407 ORTHO05D002476 6.9e-39 167.2 779 30.2
Potri.010G089700 Populus trichocarpa HOM05D002407 ORTHO05D002476 9.0e-39 166.8 816 31.0
Actinidia08503 Actinidia chinensis HOM05D002407 ORTHO05D002476 1.2e-38 166.4 754 30.6
Potri.008G151200 Populus trichocarpa HOM05D002407 ORTHO05D002476 2.6e-38 165.2 805 29.3
Rhsim02G0022900 Rhododendron simsii HOM05D002407 ORTHO05D002476 4.5e-38 164.5 755 29.7
VMungo0720G1158 Vigna mungo HOM05D002407 ORTHO05D002476 4.5e-38 164.5 769 29.9
Dinv44512 Davidia involucrata HOM05D002407 ORTHO05D002476 1.0e-37 163.3 782 29.5
COL.COLO4_10231 Corchorus olitorius HOM05D002407 ORTHO05D002476 1.3e-37 162.9 808 29.6
Manes.15G027400 Manihot esculenta HOM05D002407 ORTHO05D002476 1.3e-37 162.9 908 29.3
AUR62038105 Chenopodium quinoa HOM05D002407 ORTHO05D002476 2.9e-37 161.8 827 28.1
Solyc09g075830.3 Solanum lycopersicum HOM05D002407 ORTHO05D002476 8.5e-37 160.2 797 29.4
PGR004G2462 Punica granatum HOM05D002407 ORTHO05D002476 1.4e-36 159.5 824 28.0
RcHm_v2.0_Chr4g0416621 Rosa chinensis HOM05D002407 ORTHO05D002476 1.4e-36 159.5 782 29.2
Sabra08G0115000 Salix brachista HOM05D002407 ORTHO05D002476 1.4e-36 159.5 787 29.1
TWI73G0052 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 1.4e-36 159.5 809 28.3
Nitab4.5_0007048g0010 Nicotiana tabacum HOM05D002407 ORTHO05D002476 2.5e-36 158.7 781 29.6
Sopen09g030650 Solanum pennellii HOM05D002407 ORTHO05D002476 2.5e-36 158.7 796 29.1
MSTRG.21848 Avicennia marina HOM05D002407 ORTHO05D002476 3.2e-36 158.3 780 28.1
CiPaw.01G164400 Carya illinoinensis HOM05D002407 ORTHO05D002476 3.2e-36 158.3 1017 27.5
Ciclev10004136m.g Citrus clementina HOM05D002407 ORTHO05D002476 4.2e-36 157.9 775 29.7
SalBow2G0563 Salvia bowleyana HOM05D002407 ORTHO05D002476 4.2e-36 157.9 788 28.6
C01p41910 Brassica napus HOM05D002407 ORTHO05D002476 5.5e-36 157.5 774 28.0
PGSC0003DMG400031808 Solanum tuberosum HOM05D002407 ORTHO05D002476 9.4e-36 156.8 805 28.8
vmacro15329 Vaccinium macrocarpon HOM05D002407 ORTHO05D002476 9.4e-36 156.8 675 30.4
BcaC09g49170 Brassica carinata HOM05D002407 ORTHO05D002476 1.2e-35 156.4 757 28.8
BolC1t04147H Brassica oleracea HOM05D002407 ORTHO05D002476 1.6e-35 156.0 762 28.5
Manes.15G026500 Manihot esculenta HOM05D002407 ORTHO05D002476 2.1e-35 155.6 1033 28.0
PSO832G2586 Papaver somniferum HOM05D002407 ORTHO05D002476 2.1e-35 155.6 786 29.5
TWI09G0219 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 2.1e-35 155.6 932 28.0
Gorai.011G169000 Gossypium raimondii HOM05D002407 ORTHO05D002476 3.6e-35 154.8 910 28.8
TWI53G2093 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 3.6e-35 154.8 980 27.4
TAR636G3152 Trochodendron aralioides HOM05D002407 ORTHO05D002476 6.1e-35 154.1 772 29.4
DCAR_027192 Daucus carota HOM05D002407 ORTHO05D002476 1.0e-34 153.3 773 28.7
Sp3g20150 Schrenkiella parvula HOM05D002407 ORTHO05D002476 1.0e-34 153.3 753 29.9
AUR62038630 Chenopodium quinoa HOM05D002407 ORTHO05D002476 1.4e-34 152.9 799 29.0
BcaB06g26339 Brassica carinata HOM05D002407 ORTHO05D002476 2.3e-34 152.1 744 29.8
Glyma.10G249300 Glycine max HOM05D002407 ORTHO05D002476 2.3e-34 152.1 772 29.4
TAR633G0416 Trochodendron aralioides HOM05D002407 ORTHO05D002476 3.0e-34 151.8 790 29.4
ClCG06G006080 Citrullus lanatus HOM05D002407 ORTHO05D002476 3.9e-34 151.4 1025 28.1
unitig_32.g10810 Utricularia gibba HOM05D002407 ORTHO05D002476 3.9e-34 151.4 760 28.0
Actinidia23483 Actinidia chinensis HOM05D002407 ORTHO05D002476 8.8e-34 150.2 776 28.7
DCAR_027191 Daucus carota HOM05D002407 ORTHO05D002476 8.8e-34 150.2 796 27.9
Cc03_g03560 Coffea canephora HOM05D002407 ORTHO05D002476 1.5e-33 149.4 807 28.6
Lj6C594G25 Lonicera japonica HOM05D002407 ORTHO05D002476 1.5e-33 149.4 752 29.7
Lsat_1_v5_gn_5_148881 Lactuca sativa HOM05D002407 ORTHO05D002476 2.0e-33 149.1 799 26.7
THA.LOC104822274 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 2.0e-33 149.1 836 28.3
TAR365G0729 Trochodendron aralioides HOM05D002407 ORTHO05D002476 2.0e-33 149.1 719 31.4
Sed0008106 Sechium edule HOM05D002407 ORTHO05D002476 2.5e-33 148.7 740 29.1
BolC5t32844H Brassica oleracea HOM05D002407 ORTHO05D002476 4.3e-33 147.9 820 27.6
Gohir.A10G117100 Gossypium hirsutum HOM05D002407 ORTHO05D002476 5.7e-33 147.5 879 28.4
BcaC05g28079 Brassica carinata HOM05D002407 ORTHO05D002476 9.7e-33 146.7 815 27.2
C05p41010 Brassica napus HOM05D002407 ORTHO05D002476 9.7e-33 146.7 815 27.2
PSO210G7189 Papaver somniferum HOM05D002407 ORTHO05D002476 9.7e-33 146.7 777 28.8
A01p32710 Brassica napus HOM05D002407 ORTHO05D002476 1.7e-32 146.0 747 29.0
Duzib212G0865 Durio zibethinus HOM05D002407 ORTHO05D002476 1.7e-32 146.0 760 28.4
QL06p003139 Quercus lobata HOM05D002407 ORTHO05D002476 1.7e-32 146.0 797 29.0
Atru.chr4.2501 Acer truncatum HOM05D002407 ORTHO05D002476 2.2e-32 145.6 477 31.4
BraA01t03399Z Brassica rapa HOM05D002407 ORTHO05D002476 2.2e-32 145.6 754 28.8
Thecc.04G228600 Theobroma cacao HOM05D002407 ORTHO05D002476 2.2e-32 145.6 796 29.0
GSVIVG01017938001 Vitis vinifera HOM05D002407 ORTHO05D002476 2.2e-32 145.6 774 27.8
BcaC01g03446 Brassica carinata HOM05D002407 ORTHO05D002476 2.8e-32 145.2 757 28.1
C03p52490 Brassica napus HOM05D002407 ORTHO05D002476 2.8e-32 145.2 757 28.4
MSTRG.4019 Avicennia marina HOM05D002407 ORTHO05D002476 4.8e-32 144.4 795 27.7
COL.COLO4_09085 Corchorus olitorius HOM05D002407 ORTHO05D002476 4.8e-32 144.4 751 28.8
THA.LOC104803022 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 4.8e-32 144.4 776 28.4
BolC3t17519H Brassica oleracea HOM05D002407 ORTHO05D002476 6.3e-32 144.1 819 28.0
CARHR098270 Cardamine hirsuta HOM05D002407 ORTHO05D002476 6.3e-32 144.1 750 29.2
Actinidia36978 Actinidia chinensis HOM05D002407 ORTHO05D002476 8.2e-32 143.7 629 30.4
Ah.13g073870 Amaranthus hybridus HOM05D002407 ORTHO05D002476 8.2e-32 143.7 801 29.2
BcaB04g20522 Brassica carinata HOM05D002407 ORTHO05D002476 1.8e-31 142.5 747 28.1
Thecc.01G277700 Theobroma cacao HOM05D002407 ORTHO05D002476 1.8e-31 142.5 743 29.1
BcaB04g19200 Brassica carinata HOM05D002407 ORTHO05D002476 2.4e-31 142.1 831 29.0
BraA03t13421Z Brassica rapa HOM05D002407 ORTHO05D002476 3.1e-31 141.7 855 27.7
Aqoxy2G03363 Aquilegia oxysepala HOM05D002407 ORTHO05D002476 4.1e-31 141.4 658 29.9
Thhalv10019888m.g Eutrema salsugineum HOM05D002407 ORTHO05D002476 4.1e-31 141.4 657 29.7
Sabra02G0042400 Salix brachista HOM05D002407 ORTHO05D002476 5.3e-31 141.0 791 27.7
Glyma.20G144400 Glycine max HOM05D002407 ORTHO05D002476 6.9e-31 140.6 770 27.9
A03p42740 Brassica napus HOM05D002407 ORTHO05D002476 1.2e-30 139.8 852 27.6
FAN07G2387 Fragaria x ananassa HOM05D002407 ORTHO05D002476 1.2e-30 139.8 817 27.8
Aa31LG8G8910 Aethionema arabicum HOM05D002407 ORTHO05D002476 2.0e-30 139.0 1032 27.3
AL3G36660 Arabidopsis lyrata HOM05D002407 ORTHO05D002476 2.6e-30 138.7 1041 27.5
AT3G22380 Arabidopsis thaliana HOM05D002407 ORTHO05D002476 4.5e-30 137.9 1021 28.0
Eucgr.H03537 Eucalyptus grandis HOM05D002407 ORTHO05D002476 4.5e-30 137.9 816 27.5
unitig_748.g8339 Utricularia gibba HOM05D002407 ORTHO05D002476 4.5e-30 137.9 830 27.0
Potri.002G052300 Populus trichocarpa HOM05D002407 ORTHO05D002476 5.9e-30 137.5 871 27.0
Ah.13g073850 Amaranthus hybridus HOM05D002407 ORTHO05D002476 1.0e-29 136.7 736 27.7
THA.LOC104808535 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 1.3e-29 136.3 843 26.8
Duzib151G0448 Durio zibethinus HOM05D002407 ORTHO05D002476 2.2e-29 135.6 803 28.6
SEGI_33118 Sequoiadendron giganteum HOM05D002407 ORTHO05D013711 2.9e-29 135.2 911 28.2
FvH4_4g15230 Fragaria vesca HOM05D002407 ORTHO05D002476 6.5e-29 134.0 789 27.6
Duzib133G0624 Durio zibethinus HOM05D002407 ORTHO05D002476 8.5e-29 133.7 933 27.0
Carub.0007s2714 Capsella rubella HOM05D002407 ORTHO05D002476 1.1e-28 133.3 901 25.5
Sabra10G0053600 Salix brachista HOM05D002407 ORTHO05D002476 1.1e-28 133.3 1036 26.8
Lalb_Chr09g0319791 Lupinus albus HOM05D002407 ORTHO05D002476 2.5e-28 132.1 778 28.0
Psat6g208200 Pisum sativum HOM05D002407 ORTHO05D002476 3.2e-28 131.7 818 27.3
Lj6A599G41 Lonicera japonica HOM05D002407 ORTHO05D002476 7.2e-28 130.6 732 28.3
AL7G40870 Arabidopsis lyrata HOM05D002407 ORTHO05D002476 1.2e-27 129.8 992 26.3
FAN12G3852 Fragaria x ananassa HOM05D002407 ORTHO05D002476 1.2e-27 129.8 790 27.6
FAN22G1385 Fragaria x ananassa HOM05D002407 ORTHO05D002476 1.2e-27 129.8 708 27.8
Cpa.g.sc58.130 Carica papaya HOM05D002407 ORTHO05D002476 3.6e-27 128.3 798 27.6
Gohir.A09G214700 Gossypium hirsutum HOM05D002407 ORTHO05D002476 3.6e-27 128.3 810 28.5
Medtr1g104710 Medicago truncatula HOM05D002407 ORTHO05D002476 6.1e-27 127.5 792 27.9
Peaxi162Scf00437g00026 Petunia axillaris HOM05D002407 ORTHO05D002476 1.0e-26 126.7 815 27.6
Potri.005G210200 Populus trichocarpa HOM05D002407 ORTHO05D002476 1.0e-26 126.7 792 29.3
Duzib138G1894 Durio zibethinus HOM05D002407 ORTHO05D002476 2.3e-26 125.6 747 27.4
Lalb_Chr05g0210931 Lupinus albus HOM05D002407 ORTHO05D002476 2.3e-26 125.6 996 27.1
HPP92_006103 Vanilla planifolia HOM05D002407 ORTHO05D002476 3.9e-26 124.8 846 25.1
Ciclev10018523m.g Citrus clementina HOM05D002407 ORTHO05D002476 8.8e-26 123.6 923 25.7
Sc13g0004300 Simmondsia chinensis HOM05D002407 ORTHO05D002476 1.5e-25 122.9 826 28.5
Gorai.006G237700 Gossypium raimondii HOM05D002407 ORTHO05D002476 2.6e-25 122.1 813 28.2
CSS0005054 Camellia sinensis var. sinensis HOM05D002407 ORTHO05D002476 3.3e-25 121.7 809 27.7
Carub.0003s2254 Capsella rubella HOM05D002407 ORTHO05D002476 4.4e-25 121.3 1019 27.1
HPP92_027912 Vanilla planifolia HOM05D002407 ORTHO05D002476 4.4e-25 121.3 616 27.8
ECA234G2398 Erigeron canadensis HOM05D002407 ORTHO05D002476 5.7e-25 120.9 791 26.9
HanXRQChr04g0111801 Helianthus annuus HOM05D002407 ORTHO05D002476 1.3e-24 119.8 792 27.0
SHI00424 Sapria himalayana HOM05D002407 ORTHO05D002476 2.8e-24 118.6 809 27.8
Gohir.D09G217200 Gossypium hirsutum HOM05D002407 ORTHO05D002476 3.7e-24 118.2 783 28.7
CAN.G907.19 Capsicum annuum HOM05D002407 ORTHO05D002476 8.2e-24 117.1 732 27.3
TPR.G5532 Trifolium pratense HOM05D002407 ORTHO05D002476 1.8e-23 115.9 848 27.6
Migut.N00175 Erythranthe guttata HOM05D002407 ORTHO05D002476 4.1e-23 114.8 856 25.6
HPP92_024476 Vanilla planifolia HOM05D002407 ORTHO05D002476 9.1e-23 113.6 793 26.5
Sc25g0004400 Simmondsia chinensis HOM05D002407 ORTHO05D002476 1.2e-22 113.2 832 27.9
Zm00001eb107250 Zea mays HOM05D002407 ORTHO05D002476 1.2e-22 113.2 982 26.3
FAN17G1063 Fragaria x ananassa HOM05D002407 ORTHO05D002476 5.9e-22 110.9 713 26.5
Nitab4.5_0000795g0080 Nicotiana tabacum HOM05D002407 ORTHO05D002476 2.2e-21 109.0 770 27.7
Hma1.2p1_3606F.1_g337000 Hydrangea macrophylla HOM05D002407 ORTHO05D002476 2.9e-21 108.6 768 28.0
Gorai.008G004200 Gossypium raimondii HOM05D002407 ORTHO05D002476 5.0e-21 107.8 759 27.8
HanXRQChr04g0111791 Helianthus annuus HOM05D002407 ORTHO05D002476 5.0e-21 107.8 790 28.2
Os07g0571100 Oryza sativa ssp. japonica HOM05D002407 ORTHO05D002476 5.0e-21 107.8 438 29.9
Gohir.D10G151700 Gossypium hirsutum HOM05D002407 ORTHO05D002476 6.5e-21 107.5 728 27.7
CDE10G0571 Ceratophyllum demersum HOM05D002407 ORTHO05D002476 1.9e-20 105.9 916 25.5
Atru.chr5.1448 Acer truncatum HOM05D002407 ORTHO05D002476 3.2e-20 105.1 781 27.3
Cfa006148 Carpinus fangiana HOM05D002407 ORTHO05D002476 7.2e-20 104.0 732 25.4
Duzib211G0657 Durio zibethinus HOM05D002407 ORTHO05D002476 2.1e-19 102.4 719 28.5
Sabra05G0160300 Salix brachista HOM05D002407 ORTHO05D002476 4.7e-19 101.3 835 26.9
HPP92_024870 Vanilla planifolia HOM05D002407 ORTHO05D002476 3.0e-18 98.6 717 24.4
Gohir.D12G004400 Gossypium hirsutum HOM05D002407 ORTHO05D002476 3.9e-18 98.2 750 28.0
Ca_10916_v3 Cicer arietinum L. HOM05D002407 ORTHO05D002476 2.6e-17 95.5 769 25.5
Hund12142 Selenicereus undatus HOM05D002407 ORTHO05D002476 2.6e-17 95.5 831 25.6
SGA_v2.0_scaffold39G15271 Striga asiatica HOM05D002407 ORTHO05D002476 1.7e-16 92.8 915 26.6
Migut.G00324 Erythranthe guttata HOM05D002407 ORTHO05D002476 2.8e-16 92.0 782 26.0
BraA05t21516Z Brassica rapa HOM05D002407 ORTHO05D002476 6.3e-16 90.9 1035 24.3
A05p26430 Brassica napus HOM05D002407 ORTHO05D002476 1.4e-15 89.7 1036 24.3
Gohir.A12G004800 Gossypium hirsutum HOM05D002407 ORTHO05D002476 2.6e-14 85.5 713 27.6
MELO3C015830.2 Cucumis melo HOM05D002407 ORTHO05D002476 1.7e-13 82.8 824 26.0
MSTRG.24745 Avicennia marina HOM05D002407 ORTHO05D002476 5.0e-13 81.3 742 25.7
HPP92_024374 Vanilla planifolia HOM05D002407 ORTHO05D002476 6.5e-13 80.9 537 26.4
Haze_04701 Corylus avellana HOM05D002407 ORTHO05D002476 8.5e-13 80.5 742 23.9
ClCG09G007080 Citrullus lanatus HOM05D002407 ORTHO05D002476 2.5e-12 79.0 937 25.7
CDE10G0467 Ceratophyllum demersum HOM05D002407 ORTHO05D002476 5.5e-12 77.8 937 24.9
Zm00001eb324930 Zea mays HOM05D002407 ORTHO05D002476 7.2e-12 77.4 1065 23.6
CsaV3_7G028090 Cucumis sativus L. HOM05D002407 ORTHO05D002476 1.0e-10 73.6 934 25.5
Glyma.10G027000 Glycine max HOM05D002407 ORTHO05D002476 1.4e-10 73.2 783 23.1
SMO118G0078 Selaginella moellendorffii HOM05D011959 ORTHO05D013711 4.0e-10 71.6 725 27.3
Glyma.06G095800 Glycine max HOM05D002407 ORTHO05D002476 5.2e-10 71.2 117 39.3
Glyma.02G146900 Glycine max HOM05D002407 ORTHO05D002476 8.3e-08 63.9 783 23.6
Actinidia36975 Actinidia chinensis HOM05D002407 ORTHO05D002476 1.8e-07 62.8 442 27.6
arahy.Tifrunner.gnm1.ann1.DHG9YX Arachis hypogaea HOM05D002407 ORTHO05D002476 2.0e-06 59.3 854 24.5
Ca_09753_v3 Cicer arietinum L. HOM05D002407 ORTHO05D002476 2.0e-06 59.3 819 23.2
Nn4g22442 Nelumbo nucifera HOM05D002407 ORTHO05D002476 4.5e-06 58.2 95 42.1


User provided reference genes

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