Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 0.0e+00 1810.4 952 100.0
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 1.6e-212 743.8 990 44.3
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 9.9e-210 734.6 967 44.4
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 2.4e-203 713.4 943 43.8
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 4.0e-203 712.6 974 43.1
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 1.5e-202 710.7 969 43.6
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 3.8e-201 706.1 984 43.4
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 1.1e-200 704.5 968 43.5
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 1.9e-200 703.7 932 43.9
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 1.0e-198 698.0 962 42.4
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 1.3e-198 697.6 975 42.9
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 2.3e-198 696.8 972 42.4
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 8.7e-198 694.9 963 42.7
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 1.1e-197 694.5 957 42.6
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 3.3e-197 693.0 970 42.2
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 7.3e-197 691.8 982 42.5
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 7.3e-197 691.8 970 42.4
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 1.3e-196 691.0 953 42.9
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 1.1e-195 688.0 973 41.1
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 3.1e-195 686.4 969 42.1
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 4.0e-195 686.0 977 41.4
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.3e-195 685.6 978 42.4
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 5.3e-195 685.6 974 41.8
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 1.5e-194 684.1 970 42.6
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 2.0e-194 683.7 956 42.4
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 2.6e-194 683.3 975 42.1
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 2.6e-194 683.3 964 42.5
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 9.9e-194 681.4 973 42.3
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 1.3e-193 681.0 986 40.9
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 1.7e-193 680.6 978 42.4
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 1.7e-193 680.6 950 42.6
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 3.8e-193 679.5 1022 41.0
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 6.4e-193 678.7 968 42.8
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 1.1e-192 677.9 978 41.8
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 2.4e-192 676.8 980 42.8
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 2.4e-192 676.8 973 42.2
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 3.2e-192 676.4 971 42.0
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 5.4e-192 675.6 981 42.5
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 7.1e-192 675.2 980 42.7
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 1.2e-191 674.5 995 40.7
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.1e-191 673.7 973 42.0
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 1.3e-190 671.0 968 40.9
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 4.3e-189 666.0 951 42.2
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 4.3e-189 666.0 982 41.2
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 5.6e-189 665.6 976 41.4
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 5.6e-189 665.6 967 41.0
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 1.3e-188 664.5 950 42.0
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 4.8e-188 662.5 969 41.9
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 3.4e-186 656.4 982 40.0
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 5.8e-186 655.6 981 39.3
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 7.6e-186 655.2 971 40.6
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 3.8e-185 652.9 958 42.4
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 8.4e-185 651.7 986 40.6
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 1.9e-184 650.6 945 41.9
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 5.5e-184 649.0 882 45.1
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 9.3e-184 648.3 972 41.0
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 2.1e-183 647.1 994 40.6
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 3.5e-183 646.4 940 41.7
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 6.0e-183 645.6 966 40.2
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 7.9e-183 645.2 954 40.6
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 8.7e-182 641.7 948 40.6
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 1.1e-181 641.3 999 40.2
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 1.1e-181 641.3 956 40.4
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 1.5e-181 641.0 971 39.9
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 1.5e-181 641.0 992 39.4
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 2.5e-181 640.2 978 39.7
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 5.7e-181 639.0 935 40.2
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 9.6e-181 638.3 981 40.4
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 1.3e-180 637.9 933 40.6
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 1.3e-180 637.9 933 40.6
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 1.1e-179 634.8 978 40.1
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 2.4e-179 633.6 1026 38.8
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 2.4e-179 633.6 970 39.2
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 3.4e-178 629.8 985 40.1
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 3.4e-178 629.8 976 39.4
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 2.2e-177 627.1 966 38.9
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 2.9e-177 626.7 987 38.7
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 1.1e-176 624.8 836 43.1
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 5.5e-176 622.5 974 39.2
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 4.6e-175 619.4 969 39.3
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 6.1e-175 619.0 989 37.9
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 1.2e-170 604.7 944 41.1
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 6.5e-169 599.0 793 44.6
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 5.5e-168 595.9 989 37.9
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 1.3e-161 574.7 843 40.8
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 1.4e-160 571.2 964 36.2
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 3.0e-158 563.5 948 38.0
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 1.8e-155 554.3 985 35.6
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 2.6e-154 550.4 996 37.4
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 2.5e-144 517.3 879 38.0
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 1.2e-143 515.0 927 35.8
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 8.0e-143 512.3 782 41.4
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 8.8e-142 508.8 852 36.9
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 2.9e-137 493.8 699 40.9
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.7e-132 478.0 724 41.3
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 1.4e-115 421.8 941 32.1
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 7.8e-114 416.0 892 32.2
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 5.0e-113 413.3 929 31.6
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 1.4e-107 395.2 692 36.6
Lalb_Chr03g0040541 Lupinus albus HOM05D004953 ORTHO05D006193 5.4e-107 393.3 500 43.6
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 2.3e-102 377.9 769 33.6
Glyma.09G246350 Glycine max HOM05D004953 ORTHO05D006193 3.2e-83 314.3 429 41.0
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.3e-73 281.6 442 42.1
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 1.1e-72 279.3 481 39.7
Actinidia33395 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.0e-65 256.1 399 37.8
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 6.3e-63 246.9 468 36.8
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.1e-54 218.0 449 37.2
Actinidia12854 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.4e-49 202.6 274 42.0
FAN15G1853 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.8e-38 165.6 185 42.7
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 8.8e-25 120.2 152 45.4
TAR365G0721 Trochodendron aralioides HOM05D004953 ORTHO05D006193 1.2e-24 119.8 152 47.4
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.7e-24 117.5 153 45.1
ATR0580G291 Amborella trichopoda HOM05D004953 ORTHO05D006193 1.6e-21 109.4 67 79.1
Actinidia23343 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.0e-16 92.4 145 36.6
ATR0745G053 Amborella trichopoda HOM05D004953 ORTHO05D063336 9.8e-16 90.1 72 66.7
FvH4_6g36680 Fragaria vesca HOM05D004953 ORTHO05D006193 1.1e-14 86.7 107 43.0
FvH4_4g15200 Fragaria vesca HOM05D004953 ORTHO05D006193 2.4e-14 85.5 144 41.0
FvH4_3g38850 Fragaria vesca HOM05D004953 ORTHO05D006193 5.4e-14 84.3 95 45.3
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 1.6e-13 82.8 470 23.4
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.9e-13 80.9 96 42.7
FAN14G2572 Fragaria x ananassa HOM05D004953 ORTHO05D006193 9.5e-11 73.6 76 46.1
FvH4_6g27414 Fragaria vesca HOM05D004953 ORTHO05D006193 1.2e-10 73.2 76 46.1
FvH4_4g10312 Fragaria vesca HOM05D004953 ORTHO05D006193 2.8e-10 72.0 76 44.7
Actinidia29995 Actinidia chinensis HOM05D004953 ORTHO05D006193 6.1e-10 70.9 133 33.1
FvH4_2g12761 Fragaria vesca HOM05D004953 ORTHO05D006193 1.8e-09 69.3 76 42.1
FvH4_6g36881 Fragaria vesca HOM05D004953 ORTHO05D006193 2.3e-09 68.9 76 43.4
MCO15G701 Micromonas commoda HOM05D004953 ORTHO05D006193 6.8e-09 67.4 903 20.0
CSS0012475 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.2e-08 66.6 61 49.2
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.4e-08 65.1 130 36.9
CSS0023073 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 7.5e-08 63.9 61 49.2
FAN14G1126 Fragaria x ananassa HOM05D004953 ORTHO05D006193 6.4e-07 60.8 58 48.3
FvH4_7g08382 Fragaria vesca HOM05D004953 ORTHO05D006193 8.3e-07 60.5 58 48.3
CSS0036997 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.1e-06 60.1 67 46.3
Pp3c19_1150 Physcomitrium patens HOM05D004953 ORTHO05D006193 1.1e-06 60.1 70 44.3
FAN09G3899 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.4e-06 58.9 58 46.6


User provided reference genes

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