Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 2.0e-305 1051.6 522 100.0
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 1.5e-111 407.5 444 51.4
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.1e-104 384.8 422 49.3
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 5.2e-104 382.5 463 47.5
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 5.2e-104 382.5 432 49.1
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 4.1e-101 372.9 461 45.8
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 6.0e-100 369.0 437 46.0
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 2.3e-99 367.1 437 46.2
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 3.0e-99 366.7 444 46.2
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 6.6e-99 365.5 461 44.0
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 1.1e-98 364.8 446 45.3
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 1.1e-98 364.8 462 43.9
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 2.5e-98 363.6 462 43.7
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 7.3e-98 362.1 419 47.7
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 8.9e-96 355.1 414 48.8
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.5e-95 354.4 461 44.3
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 1.5e-95 354.4 395 48.1
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 2.0e-95 354.0 435 46.4
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 2.6e-95 353.6 443 44.9
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 3.4e-95 353.2 433 46.2
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 5.8e-95 352.4 414 48.8
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 9.9e-95 351.7 426 47.2
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.3e-94 351.3 422 47.4
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 2.2e-94 350.5 491 43.6
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 2.4e-93 347.1 427 45.0
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 2.4e-93 347.1 428 45.3
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 1.2e-92 344.7 425 44.2
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 1.6e-92 344.4 420 48.1
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 2.1e-92 344.0 421 47.0
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 2.7e-92 343.6 459 44.4
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 1.0e-91 341.7 433 44.3
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 1.0e-91 341.7 426 44.8
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 1.7e-91 340.9 428 44.6
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 2.3e-91 340.5 425 45.6
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 2.3e-91 340.5 464 42.2
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 6.6e-91 339.0 435 44.1
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 6.6e-91 339.0 436 45.0
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 8.7e-91 338.6 428 44.2
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 2.5e-90 337.0 457 43.3
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 4.3e-90 336.3 423 45.9
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 1.6e-89 334.3 432 43.8
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 3.6e-89 333.2 425 43.3
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 6.2e-89 332.4 435 44.1
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 1.1e-88 331.6 426 44.8
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 1.1e-88 331.6 437 42.8
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 1.8e-88 330.9 425 44.0
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 2.4e-88 330.5 413 44.8
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 3.1e-88 330.1 425 44.2
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 9.0e-88 328.6 393 46.6
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 2.0e-87 327.4 428 44.6
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 2.6e-87 327.0 426 43.9
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 3.4e-87 326.6 427 43.8
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 8.4e-86 322.0 426 43.7
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 1.1e-85 321.6 432 43.5
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.9e-85 320.9 437 43.5
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 3.2e-85 320.1 492 38.8
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 3.2e-85 320.1 421 43.0
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 2.1e-84 317.4 475 40.2
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.1e-84 317.4 372 48.1
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 2.7e-84 317.0 513 39.2
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 3.5e-84 316.6 423 43.7
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 2.3e-83 313.9 355 46.8
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 3.0e-83 313.5 452 43.4
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 3.9e-83 313.2 394 45.2
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 5.1e-83 312.8 440 42.5
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 5.1e-83 312.8 441 42.2
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 6.6e-83 312.4 438 42.5
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 1.9e-82 310.8 384 45.3
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 3.3e-82 310.1 436 43.1
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 5.6e-82 309.3 435 42.1
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 1.6e-81 307.8 462 40.3
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 6.2e-81 305.8 433 41.8
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.4e-80 303.9 463 41.3
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.0e-79 300.8 413 42.4
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 3.4e-79 300.1 473 40.2
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 1.3e-78 298.1 385 44.7
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 1.9e-77 294.3 404 42.3
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 3.5e-76 290.0 392 43.1
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 4.6e-76 289.7 474 37.6
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 1.5e-74 284.6 448 38.6
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.3e-73 281.6 399 41.1
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 1.6e-73 281.2 380 45.5
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 6.2e-73 279.3 443 40.0
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 8.1e-73 278.9 394 42.9
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.2e-71 275.0 367 42.5
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 4.9e-70 269.6 442 37.1
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 1.1e-69 268.5 320 46.6
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 5.5e-69 266.2 375 41.6
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 8.4e-62 242.3 459 37.3
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 6.7e-59 232.6 283 47.3
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 8.7e-59 232.3 269 47.2
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 2.2e-54 217.6 291 43.0
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.4e-53 214.9 315 41.3
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 2.1e-52 211.1 342 37.4
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 1.0e-51 208.8 252 44.8
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 5.5e-45 186.4 435 30.3
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 1.4e-40 171.8 290 35.2
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 3.6e-36 157.1 231 40.3
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 4.7e-36 156.8 133 61.7
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 5.5e-29 133.3 285 34.4
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 3.0e-27 127.5 220 37.7
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.1e-24 119.0 379 28.8
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 1.3e-22 112.1 198 34.8
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 4.7e-20 103.6 144 39.6
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 8.0e-20 102.8 148 40.5
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 5.7e-18 96.7 168 35.7
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 2.9e-09 67.8 84 41.7


User provided reference genes

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