Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0733G186 Amborella trichopoda HOM05D002273 ORTHO05D000818 1.2e-58 229.6 111 100.0
MBI18_g28203_MAGBIO Magnolia biondii HOM05D002273 ORTHO05D000818 2.6e-13 79.0 105 39.0
TAR625G1076 Trochodendron aralioides HOM05D002273 ORTHO05D000818 1.4e-11 73.2 95 41.1
RcHm_v2.0_Chr4g0414691 Rosa chinensis HOM05D002273 ORTHO05D000818 2.1e-10 69.3 99 38.4
Hma1.2p1_2122F.1_g314510 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 1.1e-08 63.5 94 39.4
Hma1.2p1_1223F.1_g268330 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 1.9e-08 62.8 94 38.3
HPP92_012377 Vanilla planifolia HOM05D002077 ORTHO05D000818 2.5e-08 62.4 93 36.6
Lsat_1_v5_gn_6_61000 Lactuca sativa HOM05D002273 ORTHO05D000818 3.3e-08 62.0 94 33.0
Prupe.1G158200 Prunus persica HOM05D002273 ORTHO05D000818 4.3e-08 61.6 99 37.4
TAR371G0597 Trochodendron aralioides HOM05D002273 ORTHO05D000818 4.3e-08 61.6 94 34.0
FAN09G0900 Fragaria x ananassa HOM05D002273 ORTHO05D000818 7.4e-08 60.8 93 35.5
HPP92_018672 Vanilla planifolia HOM05D002273 ORTHO05D000818 7.4e-08 60.8 93 36.6
Dinv10227 Davidia involucrata HOM05D002273 ORTHO05D000818 1.7e-07 59.7 99 33.3
Dinv12946 Davidia involucrata HOM05D002273 ORTHO05D000818 1.7e-07 59.7 99 33.3
HPP92_018690 Vanilla planifolia HOM05D002273 ORTHO05D000818 1.7e-07 59.7 93 35.5
FAN07G2327 Fragaria x ananassa HOM05D000140 ORTHO05D000087 2.2e-07 59.3 99 35.4
Hma1.2p1_0383F.1_g140340 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 2.2e-07 59.3 97 35.1
Actinidia27496 Actinidia chinensis HOM05D002273 ORTHO05D000818 2.8e-07 58.9 108 33.3
Actinidia35860 Actinidia chinensis HOM05D002273 ORTHO05D000818 2.8e-07 58.9 101 32.7
HPP92_018673 Vanilla planifolia HOM05D002273 ORTHO05D000818 2.8e-07 58.9 86 38.4
GSVIVG01037123001 Vitis vinifera HOM05D002273 ORTHO05D000818 2.8e-07 58.9 92 35.9
GSVIVG01037125001 Vitis vinifera HOM05D000012 ORTHO05D003625 2.8e-07 58.9 95 37.9
Actinidia02878 Actinidia chinensis HOM05D002273 ORTHO05D000818 3.7e-07 58.5 104 32.7
HPP92_018691 Vanilla planifolia HOM05D002273 ORTHO05D000818 4.8e-07 58.2 86 38.4
CSS0048802 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 6.3e-07 57.8 104 31.7
CSS0003272 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 8.2e-07 57.4 104 31.7
FAN22G1558 Fragaria x ananassa HOM05D002273 ORTHO05D000818 8.2e-07 57.4 99 33.3
CSS0050412 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 1.1e-06 57.0 104 31.7
MBI02_g25002_MAGBIO Magnolia biondii HOM05D002273 ORTHO05D000818 1.1e-06 57.0 90 36.7
ATR1149G060 Amborella trichopoda HOM05D002077 ORTHO05D000818 1.4e-06 56.6 88 28.4
RcHm_v2.0_Chr4g0415031 Rosa chinensis HOM05D002273 ORTHO05D000818 1.4e-06 56.6 102 34.3
Hma1.2p1_0383F.1_g140320 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 1.8e-06 56.2 94 33.0
FvH4_4g13901 Fragaria vesca HOM05D002273 ORTHO05D000818 3.1e-06 55.5 95 34.7
FAN12G3039 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.1e-06 55.5 95 34.7
Lj6A540T15 Lonicera japonica HOM05D002273 ORTHO05D000818 3.1e-06 55.5 102 33.3
Lj6A542G10 Lonicera japonica HOM05D002273 ORTHO05D000818 3.1e-06 55.5 95 33.7
MD04G1010000 Malus domestica HOM05D002273 ORTHO05D000818 3.1e-06 55.5 99 33.3
Actinidia35859 Actinidia chinensis HOM05D002273 ORTHO05D000818 4.1e-06 55.1 104 32.7
Sabra16G0021600 Salix brachista HOM05D002273 ORTHO05D000818 4.1e-06 55.1 92 32.6
Sabra16G0026200 Salix brachista HOM05D002273 ORTHO05D000818 4.1e-06 55.1 99 34.3
Sabra16G0026300 Salix brachista HOM05D002273 ORTHO05D000818 4.1e-06 55.1 92 32.6
vmacro08618 Vaccinium macrocarpon HOM05D002273 ORTHO05D000818 4.1e-06 55.1 103 34.0
Manes.13G095200 Manihot esculenta HOM05D002273 ORTHO05D000818 6.9e-06 54.3 94 29.8
QL02p002659 Quercus lobata HOM05D002273 ORTHO05D000818 6.9e-06 54.3 99 31.3
Sabra16G0021500 Salix brachista HOM05D002273 ORTHO05D000818 6.9e-06 54.3 93 34.4
GSVIVG01005600001 Vitis vinifera HOM05D002273 ORTHO05D000818 6.9e-06 54.3 95 37.9
CSS0000286 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 9.1e-06 53.9 102 29.4
Dinv27228 Davidia involucrata HOM05D002273 ORTHO05D000818 9.1e-06 53.9 99 31.3
GSVIVG01022448001 Vitis vinifera HOM05D002273 ORTHO05D000818 9.1e-06 53.9 95 33.7


User provided reference genes

Program Settings