Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0724G080 Amborella trichopoda HOM05D003244 ORTHO05D003645 2.8e-134 482.3 302 100.0
Aqoxy7G01099 Aquilegia oxysepala HOM05D003244 ORTHO05D003645 4.4e-39 166.0 279 41.2
TAR626G1385 Trochodendron aralioides HOM05D003244 ORTHO05D003645 2.9e-38 163.3 270 41.9
Dinv04023 Davidia involucrata HOM05D003244 ORTHO05D003645 2.4e-37 160.2 274 43.1
TAR383G0203 Trochodendron aralioides HOM05D003244 ORTHO05D003645 6.0e-36 155.6 284 41.5
Nn8g38728 Nelumbo nucifera HOM05D003244 ORTHO05D003645 2.9e-30 136.7 283 37.5
GSVIVG01016786001 Vitis vinifera HOM05D003244 ORTHO05D003645 6.4e-30 135.6 274 47.8
Actinidia32174 Actinidia chinensis HOM05D003244 ORTHO05D003645 1.9e-29 134.0 279 51.3
Hma1.2p1_0291F.1_g115240 Hydrangea macrophylla HOM05D003244 ORTHO05D003645 4.2e-29 132.9 281 34.2
Nn6g35582 Nelumbo nucifera HOM05D003244 ORTHO05D003645 7.1e-29 132.1 268 37.3
TWI79G0895 Tripterygium wilfordii HOM05D003244 ORTHO05D003645 9.3e-29 131.7 265 40.8
Sabra01G0140200 Salix brachista HOM05D003244 ORTHO05D003645 3.5e-28 129.8 260 38.8
Potri.003G063000 Populus trichocarpa HOM05D003244 ORTHO05D003645 7.9e-28 128.6 272 33.1
Hma1.2p1_0496F.1_g166130 Hydrangea macrophylla HOM05D003244 ORTHO05D003645 1.0e-27 128.3 167 69.5
Actinidia28160 Actinidia chinensis HOM05D003244 ORTHO05D003645 1.3e-27 127.9 98 62.2
AUR62016380 Chenopodium quinoa HOM05D003244 ORTHO05D003645 8.7e-27 125.2 188 42.6
Cpa.g.sc25.97 Carica papaya HOM05D003244 ORTHO05D003645 1.5e-26 124.4 241 42.7
Sabra03G0036700 Salix brachista HOM05D003244 ORTHO05D003645 2.5e-26 123.6 272 43.8
Rhsim12G0208800 Rhododendron simsii HOM05D003244 ORTHO05D003645 2.1e-25 120.6 245 49.4
TWI31G0664 Tripterygium wilfordii HOM05D003244 ORTHO05D003645 2.1e-25 120.6 269 36.1
AUR62011561 Chenopodium quinoa HOM05D003244 ORTHO05D003645 2.8e-25 120.2 193 57.0
Potri.001G171100 Populus trichocarpa HOM05D003244 ORTHO05D003645 3.7e-25 119.8 260 45.0
Lj3g0018176 Lotus japonicus HOM05D003244 ORTHO05D003645 1.1e-24 118.2 248 37.1
EL10Ac9g21941 Beta vulgaris HOM05D003244 ORTHO05D003645 3.1e-24 116.7 227 53.3
Actinidia39089 Actinidia chinensis HOM05D003244 ORTHO05D003645 5.3e-24 115.9 299 37.5
PSO421G0240 Papaver somniferum HOM05D003244 ORTHO05D003645 5.3e-24 115.9 98 53.1
Lj5C39G2 Lonicera japonica HOM05D003244 ORTHO05D003645 6.9e-24 115.5 188 41.5
Manes.04G142700 Manihot esculenta HOM05D003244 ORTHO05D003645 4.5e-23 112.8 246 35.8
CANSAT56G4312 Cannabis sativa HOM05D003244 ORTHO05D003645 5.8e-23 112.5 265 33.2
Nitab4.5_0011707g0020 Nicotiana tabacum HOM05D003244 ORTHO05D003645 5.8e-23 112.5 264 47.0
Rhsim08G0237100 Rhododendron simsii HOM05D003244 ORTHO05D003645 5.8e-23 112.5 263 47.5
MD17G1171000 Malus domestica HOM05D003244 ORTHO05D003645 7.6e-23 112.1 264 37.9
FvH4_6g34380 Fragaria vesca HOM05D003244 ORTHO05D003645 1.0e-22 111.7 264 37.1
vmacro22213 Vaccinium macrocarpon HOM05D003244 ORTHO05D003645 1.3e-22 111.3 183 49.7
Lj9A522G71 Lonicera japonica HOM05D003244 ORTHO05D003645 1.7e-22 110.9 226 38.9
PSO063G5495 Papaver somniferum HOM05D003244 ORTHO05D003645 1.7e-22 110.9 170 46.5
Thecc.06G117700 Theobroma cacao HOM05D003244 ORTHO05D003645 1.7e-22 110.9 265 36.2
Prupe.7G067500 Prunus persica HOM05D003244 ORTHO05D003645 2.2e-22 110.5 264 44.3
Ciclev10025086m.g Citrus clementina HOM05D003244 ORTHO05D003645 2.9e-22 110.2 297 45.1
FAN09G4047 Fragaria x ananassa HOM05D003244 ORTHO05D003645 3.8e-22 109.8 264 37.1
Peaxi162Scf00038g01820 Petunia axillaris HOM05D003244 ORTHO05D003645 3.8e-22 109.8 101 53.5
FAN14G0986 Fragaria x ananassa HOM05D003244 ORTHO05D003645 4.9e-22 109.4 264 47.7
DCAR_016132 Daucus carota HOM05D003244 ORTHO05D003645 8.4e-22 108.6 247 35.6
MD09G1186100 Malus domestica HOM05D003244 ORTHO05D003645 1.4e-21 107.8 265 48.7
RcHm_v2.0_Chr2g0144721 Rosa chinensis HOM05D003244 ORTHO05D003645 1.4e-21 107.8 264 33.0
Gohir.D04G009200 Gossypium hirsutum HOM05D003244 ORTHO05D003645 3.2e-21 106.7 268 41.8
Gorai.012G011100 Gossypium raimondii HOM05D003244 ORTHO05D003645 3.2e-21 106.7 268 41.8
Manes.11G022200 Manihot esculenta HOM05D003244 ORTHO05D003645 5.5e-21 105.9 282 33.7
Peaxi162Scf00207g01431 Petunia axillaris HOM05D003244 ORTHO05D003645 5.5e-21 105.9 259 47.5
FAN02G3680 Fragaria x ananassa HOM05D003244 ORTHO05D003645 7.1e-21 105.5 264 35.2
FAN05G2950 Fragaria x ananassa HOM05D003244 ORTHO05D003645 7.1e-21 105.5 264 36.0
ClCG07G013970 Citrullus lanatus HOM05D003244 ORTHO05D003645 9.3e-21 105.1 100 49.0
DCAR_007631 Daucus carota HOM05D003244 ORTHO05D003645 9.3e-21 105.1 91 53.8
Sopen03g040770 Solanum pennellii HOM05D003244 ORTHO05D003645 9.3e-21 105.1 257 38.1
HanXRQChr10g0312291 Helianthus annuus HOM05D003244 ORTHO05D003645 1.2e-20 104.8 99 50.5
CSS0012837 Camellia sinensis var. sinensis HOM05D003244 ORTHO05D003645 1.6e-20 104.4 276 46.4
Eucgr.F03170 Eucalyptus grandis HOM05D003244 ORTHO05D003645 1.6e-20 104.4 284 30.3
Solyc06g062860.4 Solanum lycopersicum HOM05D003244 ORTHO05D003645 1.6e-20 104.4 178 56.7
Sopen06g022320 Solanum pennellii HOM05D003244 ORTHO05D003645 2.1e-20 104.0 178 54.5
Solyc03g121950.3 Solanum lycopersicum HOM05D003244 ORTHO05D003645 2.7e-20 103.6 261 36.0
PGSC0003DMG400004888 Solanum tuberosum HOM05D003244 ORTHO05D003645 2.7e-20 103.6 178 55.1
CSS0016093 Camellia sinensis var. sinensis HOM05D003244 ORTHO05D003645 3.5e-20 103.2 276 43.5
CiPaw.02G137000 Carya illinoinensis HOM05D003244 ORTHO05D003645 4.6e-20 102.8 259 42.9
Haze_16008 Corylus avellana HOM05D003244 ORTHO05D003645 6.0e-20 102.4 271 33.2
Hund06581 Selenicereus undatus HOM05D003244 ORTHO05D003645 6.0e-20 102.4 193 59.1
CiPaw.01G221000 Carya illinoinensis HOM05D003244 ORTHO05D003645 7.9e-20 102.1 274 34.3
Glyma.07G036300 Glycine max HOM05D003244 ORTHO05D003645 7.9e-20 102.1 98 54.1
HanXRQChr12g0360461 Helianthus annuus HOM05D003244 ORTHO05D003645 7.9e-20 102.1 98 50.0
arahy.Tifrunner.gnm1.ann1.S9YVIH Arachis hypogaea HOM05D003244 ORTHO05D003645 1.8e-19 100.9 272 45.2
Medtr8g019560 Medicago truncatula HOM05D003244 ORTHO05D003645 1.8e-19 100.9 249 40.2
Nitab4.5_0002072g0120 Nicotiana tabacum HOM05D003244 ORTHO05D003645 2.3e-19 100.5 287 31.4
Phvul.010G133101 Phaseolus vulgaris HOM05D003244 ORTHO05D003645 2.3e-19 100.5 98 51.0
PGR102G1386 Punica granatum HOM05D003244 ORTHO05D003645 3.0e-19 100.1 221 50.2
Hund14580 Selenicereus undatus HOM05D003244 ORTHO05D003645 3.0e-19 100.1 97 52.6
Oeu058715.1 Olea europaea HOM05D003244 ORTHO05D003645 5.1e-19 99.4 250 42.8
VMungo0331G0221 Vigna mungo HOM05D001762 ORTHO05D001774 5.1e-19 99.4 98 51.0
MELO3C025813.2 Cucumis melo HOM05D003244 ORTHO05D003645 6.7e-19 99.0 100 48.0
CAN.G862.25 Capsicum annuum HOM05D003244 ORTHO05D003645 8.7e-19 98.6 244 34.4
Nitab4.5_0002879g0040 Nicotiana tabacum HOM05D003244 ORTHO05D003645 8.7e-19 98.6 287 31.7
Ca_05015_v3 Cicer arietinum L. HOM05D003244 ORTHO05D003645 1.9e-18 97.4 252 37.7
Sed0027854 Sechium edule HOM05D003244 ORTHO05D003645 1.9e-18 97.4 273 31.5
Ah.01g020820 Amaranthus hybridus HOM05D003244 ORTHO05D003645 2.5e-18 97.1 204 50.0
MSTRG.4785 Avicennia marina HOM05D003244 ORTHO05D003645 2.5e-18 97.1 267 44.6
Glyma.13G346900 Glycine max HOM05D003244 ORTHO05D003645 2.5e-18 97.1 278 42.1
Gohir.A05G406400 Gossypium hirsutum HOM05D003244 ORTHO05D003645 2.5e-18 97.1 177 45.2
Sed0005467 Sechium edule HOM05D003244 ORTHO05D003645 2.5e-18 97.1 273 31.5
TPR.G16437 Trifolium pratense HOM05D003244 ORTHO05D003645 3.3e-18 96.7 252 33.7
CsaV3_3G043570 Cucumis sativus L. HOM05D003244 ORTHO05D003645 4.3e-18 96.3 100 46.0
Psat4g183560 Pisum sativum HOM05D003244 ORTHO05D003645 4.3e-18 96.3 243 36.6
COL.COLO4_30782 Corchorus olitorius HOM05D003244 ORTHO05D003645 7.4e-18 95.5 269 39.8
Phvul.005G156000 Phaseolus vulgaris HOM05D003244 ORTHO05D003645 9.6e-18 95.1 248 44.4
MSTRG.9512 Avicennia marina HOM05D003244 ORTHO05D003645 1.3e-17 94.7 96 49.0
SalBow6G2321 Salvia bowleyana HOM05D003244 ORTHO05D003645 1.3e-17 94.7 88 52.3
Glyma.15G027500 Glycine max HOM05D003244 ORTHO05D003645 1.6e-17 94.4 278 45.0
Lalb_Chr22g0352001 Lupinus albus HOM05D003244 ORTHO05D003645 1.6e-17 94.4 251 38.6
arahy.Tifrunner.gnm1.ann1.62L32R Arachis hypogaea HOM05D003244 ORTHO05D003645 2.1e-17 94.0 274 44.5
Gohir.D06G200600 Gossypium hirsutum HOM05D003244 ORTHO05D003645 2.8e-17 93.6 268 40.3
Atru.chr1.3900 Acer truncatum HOM05D003244 ORTHO05D003645 3.7e-17 93.2 250 36.0
Gorai.010G234100 Gossypium raimondii HOM05D003244 ORTHO05D003645 4.8e-17 92.8 268 34.3
ECA234G2908 Erigeron canadensis HOM05D003244 ORTHO05D003645 6.3e-17 92.4 278 33.5
Lalb_Chr14g0372621 Lupinus albus HOM05D003244 ORTHO05D003645 8.2e-17 92.0 252 44.8
Duzib235G0409 Durio zibethinus HOM05D003244 ORTHO05D003645 1.1e-16 91.7 300 30.0
VMungo1080G0053 Vigna mungo HOM05D003244 ORTHO05D003645 1.4e-16 91.3 242 50.0
Gohir.A06G192700 Gossypium hirsutum HOM05D003244 ORTHO05D003645 1.8e-16 90.9 268 39.2
PSO210G5765 Papaver somniferum HOM05D003244 ORTHO05D003645 3.1e-16 90.1 97 51.5
SalBow7G3930 Salvia bowleyana HOM05D003244 ORTHO05D003645 3.1e-16 90.1 205 54.6
Lalb_Chr24g0396621 Lupinus albus HOM05D003244 ORTHO05D003645 9.0e-16 88.6 239 35.1
Glyma.16G005700 Glycine max HOM05D003244 ORTHO05D003645 1.5e-15 87.8 252 37.3
Ca_01233_v3 Cicer arietinum L. HOM05D003244 ORTHO05D003645 2.0e-15 87.4 246 35.0
Cfa003546 Carpinus fangiana HOM05D003244 ORTHO05D003645 2.6e-15 87.0 274 30.7
THA.LOC104815625 Tarenaya hassleriana HOM05D003244 ORTHO05D003645 5.9e-15 85.9 98 49.0
CDE06G0734 Ceratophyllum demersum HOM05D003244 ORTHO05D003645 1.3e-14 84.7 273 29.3
Lj3g0017349 Lotus japonicus HOM05D003244 ORTHO05D003645 1.3e-14 84.7 282 36.2
Sc10g0005710 Simmondsia chinensis HOM05D003244 ORTHO05D003645 1.3e-14 84.7 199 39.2
vmacro17050 Vaccinium macrocarpon HOM05D003244 ORTHO05D003645 3.8e-14 83.2 294 37.8
Ca_01232_v3 Cicer arietinum L. HOM05D003244 ORTHO05D003645 8.4e-14 82.0 246 34.1
HanXRQChr09g0276711 Helianthus annuus HOM05D003244 ORTHO05D003645 1.1e-13 81.6 98 46.9
Migut.D00945 Erythranthe guttata HOM05D003244 ORTHO05D003645 1.4e-13 81.3 268 30.6
Dinv37877 Davidia involucrata HOM05D003244 ORTHO05D003645 1.9e-13 80.9 215 49.3
Hma1.2p1_0695F.1_g204470 Hydrangea macrophylla HOM05D003244 ORTHO05D003645 5.5e-13 79.3 56 62.5
arahy.Tifrunner.gnm1.ann1.THNB81 Arachis hypogaea HOM05D003244 ORTHO05D003645 4.6e-12 76.3 290 40.0
CAN.G825.19 Capsicum annuum HOM05D000544 ORTHO05D003645 4.6e-12 76.3 157 35.0
Hma1.2p1_0165F.1_g073340 Hydrangea macrophylla HOM05D003244 ORTHO05D003645 4.6e-12 76.3 54 63.0
HPP92_023800 Vanilla planifolia HOM05D003244 ORTHO05D003645 6.1e-12 75.9 137 36.5
CDE07G0771 Ceratophyllum demersum HOM05D003244 ORTHO05D003645 1.3e-11 74.7 240 28.8
Gohir.A10G052600 Gossypium hirsutum HOM05D003244 ORTHO05D003645 1.3e-11 74.7 165 43.6
Medtr2g099480 Medicago truncatula HOM05D003244 ORTHO05D003645 1.3e-11 74.7 242 47.5
Lsat_1_v5_gn_5_135681 Lactuca sativa HOM05D003244 ORTHO05D003645 5.1e-11 72.8 80 46.2
TPR.G6601 Trifolium pratense HOM05D003244 ORTHO05D003645 6.7e-11 72.4 243 33.3
unitig_22.g6013 Utricularia gibba HOM05D003244 ORTHO05D003645 2.5e-10 70.5 96 38.5
Actinidia26688 Actinidia chinensis HOM05D003244 ORTHO05D003645 4.8e-09 66.2 54 57.4
Duzib192G0343 Durio zibethinus HOM05D003244 ORTHO05D003645 8.2e-09 65.5 181 38.1
Actinidia21785 Actinidia chinensis HOM05D003244 ORTHO05D003645 1.2e-07 61.6 39 66.7
C06p15680 Brassica napus HOM05D003244 ORTHO05D003645 1.7e-06 57.8 101 38.6
Sp1g40620 Schrenkiella parvula HOM05D003244 ORTHO05D003645 3.8e-06 56.6 89 38.2


User provided reference genes

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