Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0721G130 Amborella trichopoda HOM05D004198 ORTHO05D006470 2.9e-72 275.0 130 100.0
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 5.2e-53 211.1 123 81.3
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 3.9e-48 194.9 122 73.8
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 4.3e-47 191.4 121 73.6
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 4.3e-47 191.4 119 74.8
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 7.3e-47 190.7 121 74.4
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 7.3e-47 190.7 122 71.3
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 7.3e-47 190.7 121 72.7
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 9.5e-47 190.3 122 73.0
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 9.5e-47 190.3 123 72.4
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 9.5e-47 190.3 123 71.5
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 1.2e-46 189.9 123 71.5
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.2e-46 189.9 123 71.5
FAN26G1461 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.2e-46 189.9 123 71.5
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.2e-46 189.9 123 71.5
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 2.1e-46 189.1 122 70.5
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 2.1e-46 189.1 122 69.7
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 2.8e-46 188.7 121 72.7
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 3.6e-46 188.3 121 72.7
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 4.7e-46 188.0 121 71.1
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 4.7e-46 188.0 123 70.7
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 6.1e-46 187.6 115 76.5
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 6.1e-46 187.6 123 69.9
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 6.1e-46 187.6 123 72.4
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 6.1e-46 187.6 121 72.7
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 8.0e-46 187.2 122 71.3
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 8.0e-46 187.2 121 71.9
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 8.0e-46 187.2 121 71.9
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 8.0e-46 187.2 121 70.2
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 1.0e-45 186.8 122 70.5
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 1.0e-45 186.8 121 71.9
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 1.0e-45 186.8 121 70.2
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 1.4e-45 186.4 122 68.0
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 1.4e-45 186.4 121 71.1
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 1.4e-45 186.4 122 71.3
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 1.4e-45 186.4 121 71.9
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 1.4e-45 186.4 122 68.0
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 1.8e-45 186.0 122 70.5
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.8e-45 186.0 121 71.9
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 1.8e-45 186.0 121 71.1
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 2.3e-45 185.7 121 70.2
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 2.3e-45 185.7 121 69.4
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 2.3e-45 185.7 115 74.8
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 3.1e-45 185.3 121 71.9
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 3.1e-45 185.3 121 70.2
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 3.1e-45 185.3 125 68.8
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 3.1e-45 185.3 121 72.7
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 4.0e-45 184.9 121 67.8
BcaNung02155 Brassica carinata HOM05D004198 ORTHO05D006470 4.0e-45 184.9 122 68.0
C07p59520 Brassica napus HOM05D004198 ORTHO05D006470 4.0e-45 184.9 122 68.0
BolC7t46396H Brassica oleracea HOM05D004198 ORTHO05D006470 4.0e-45 184.9 122 68.0
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 4.0e-45 184.9 121 70.2
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 5.2e-45 184.5 122 69.7
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 6.8e-45 184.1 123 68.3
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 6.8e-45 184.1 120 71.7
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 6.8e-45 184.1 123 68.3
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 6.8e-45 184.1 122 68.0
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 6.8e-45 184.1 121 68.6
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 6.8e-45 184.1 123 69.1
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 6.8e-45 184.1 120 71.7
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 1.2e-44 183.3 119 71.4
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 1.2e-44 183.3 119 71.4
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 1.2e-44 183.3 123 68.3
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 1.2e-44 183.3 122 66.4
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 1.2e-44 183.3 121 71.1
A03p61840 Brassica napus HOM05D004198 ORTHO05D006470 1.5e-44 183.0 122 67.2
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 1.5e-44 183.0 120 71.7
DCAR_000446 Daucus carota HOM05D004198 ORTHO05D006470 2.0e-44 182.6 119 70.6
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 2.0e-44 182.6 121 68.6
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 2.0e-44 182.6 120 69.2
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 2.6e-44 182.2 121 69.4
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 2.6e-44 182.2 122 65.6
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 2.6e-44 182.2 121 70.2
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 3.4e-44 181.8 120 70.8
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 3.4e-44 181.8 119 71.4
BraA03t15222Z Brassica rapa HOM05D004198 ORTHO05D006470 4.4e-44 181.4 122 66.4
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 4.4e-44 181.4 121 67.8
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 4.4e-44 181.4 120 67.5
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 7.5e-44 180.6 121 69.4
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 9.8e-44 180.3 121 68.6
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 9.8e-44 180.3 122 63.9
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 9.8e-44 180.3 122 63.9
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 9.8e-44 180.3 122 63.9
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 9.8e-44 180.3 121 67.8
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 9.8e-44 180.3 121 67.8
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 1.3e-43 179.9 124 66.1
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 1.3e-43 179.9 120 70.0
PGSC0003DMG401015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 1.3e-43 179.9 121 69.4
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 2.2e-43 179.1 122 65.6
CARHR241180 Cardamine hirsuta HOM05D004198 ORTHO05D006470 2.2e-43 179.1 122 65.6
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 2.2e-43 179.1 119 70.6
PSO724G0241 Papaver somniferum HOM05D004198 ORTHO05D006470 2.9e-43 178.7 120 67.5
EL10Ac8g18951 Beta vulgaris HOM05D004198 ORTHO05D006470 3.7e-43 178.3 120 66.7
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 3.7e-43 178.3 122 64.8
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 3.7e-43 178.3 121 68.6
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 4.9e-43 177.9 122 62.3
CAN.G86.12 Capsicum annuum HOM05D004198 ORTHO05D006470 4.9e-43 177.9 121 69.4
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 6.4e-43 177.6 122 65.6
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 8.3e-43 177.2 120 66.7
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 1.1e-42 176.8 124 63.7
Duzib168G0961 Durio zibethinus HOM05D004198 ORTHO05D006470 1.9e-42 176.0 124 63.7
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 1.9e-42 176.0 115 73.0
SEGI_06318 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 2.4e-42 175.6 118 67.8
Carub.0007s0731 Capsella rubella HOM05D004198 ORTHO05D006470 3.2e-42 175.3 122 62.3
AL7G18410 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 4.1e-42 174.9 122 64.8
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 4.1e-42 174.9 121 64.5
CDE05G0881 Ceratophyllum demersum HOM05D004198 ORTHO05D006470 9.2e-42 173.7 121 65.3
Sopen07g006480 Solanum pennellii HOM05D004198 ORTHO05D006470 1.6e-41 172.9 121 66.9
A03p61830 Brassica napus HOM05D004198 ORTHO05D006470 1.0e-40 170.2 122 62.3
BolC7t46395H Brassica oleracea HOM05D004198 ORTHO05D006470 1.7e-40 169.5 122 61.5
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 3.0e-40 168.7 118 63.6
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 7.3e-39 164.1 119 63.9
TWI63G0157 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 1.6e-38 162.9 122 59.8
PSO135G0878 Papaver somniferum HOM05D004198 ORTHO05D000955 5.2e-37 157.9 123 59.3
Atru.chr7.1795 Acer truncatum HOM05D004198 ORTHO05D006470 2.0e-36 156.0 123 58.5
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 7.8e-33 144.1 118 58.5
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 1.2e-30 136.7 118 55.1
Potri.006G134450 Populus trichocarpa HOM05D004198 ORTHO05D006470 1.4e-29 133.3 122 54.9
BraA03t15221Z Brassica rapa HOM05D004198 ORTHO05D006470 3.1e-29 132.1 94 62.8
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 1.4e-26 123.2 119 53.8
C07p59510 Brassica napus HOM05D004198 ORTHO05D006470 4.6e-25 118.2 122 49.2
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 1.7e-24 116.3 125 50.4
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 2.3e-24 115.9 78 69.2
PGSC0003DMG400002301 Solanum tuberosum HOM05D004198 ORTHO05D006470 3.1e-21 105.5 73 69.9
Thecc.09G068400 Theobroma cacao HOM05D004198 ORTHO05D006470 4.0e-21 105.1 73 64.4
Haze_26708 Corylus avellana HOM05D004198 ORTHO05D006470 1.4e-18 96.7 115 39.1
Ciclev10008705m.g Citrus clementina HOM05D004198 ORTHO05D006470 7.1e-18 94.4 74 62.2
MD02G1105200 Malus domestica HOM05D004198 ORTHO05D006470 2.3e-16 89.4 54 72.2
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 1.6e-14 83.2 51 72.5
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 1.7e-08 63.2 83 43.4


User provided reference genes

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