Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0705G215 Amborella trichopoda HOM05D001156 ORTHO05D001006 3.1e-64 248.8 181 100.0
ATR0564G309 Amborella trichopoda HOM05D001156 ORTHO05D001006 1.1e-27 127.5 134 55.2
Rhsim06G0063500 Rhododendron simsii HOM05D001156 ORTHO05D001006 2.1e-15 86.7 123 43.1
Oeu056050.1 Olea europaea HOM05D001156 ORTHO05D001006 1.0e-14 84.3 122 44.3
MELO3C002405.2 Cucumis melo HOM05D001156 ORTHO05D001006 1.3e-14 84.0 117 46.2
Oeu058940.1 Olea europaea HOM05D001156 ORTHO05D001006 1.3e-14 84.0 122 43.4
Eucgr.E04306 Eucalyptus grandis HOM05D001156 ORTHO05D001006 5.1e-14 82.0 114 45.6
PSO384G4824 Papaver somniferum HOM05D001156 ORTHO05D001006 1.1e-13 80.9 118 42.4
Sed0024267 Sechium edule HOM05D001156 ORTHO05D001006 1.1e-13 80.9 114 45.6
CSS0047861 Camellia sinensis var. sinensis HOM05D001156 ORTHO05D001006 1.5e-13 80.5 121 43.0
ClCG03G004220 Citrullus lanatus HOM05D001156 ORTHO05D001006 1.5e-13 80.5 117 43.6
Migut.N00989 Erythranthe guttata HOM05D001156 ORTHO05D001006 1.5e-13 80.5 124 42.7
Migut.N00990 Erythranthe guttata HOM05D001156 ORTHO05D001006 1.5e-13 80.5 124 42.7
Nitab4.5_0008618g0010 Nicotiana tabacum HOM05D001156 ORTHO05D001006 1.5e-13 80.5 121 41.3
PSO339G1229 Papaver somniferum HOM05D001156 ORTHO05D001006 1.5e-13 80.5 118 42.4
MSTRG.7600 Avicennia marina HOM05D001156 ORTHO05D001006 2.5e-13 79.7 113 45.1
Duzib132G0565 Durio zibethinus HOM05D001156 ORTHO05D001006 2.5e-13 79.7 119 42.9
ATR0749G086 Amborella trichopoda HOM05D001156 ORTHO05D001006 3.3e-13 79.3 132 44.7
Migut.D01470 Erythranthe guttata HOM05D001156 ORTHO05D001006 3.3e-13 79.3 124 42.7
GSVIVG01012121001 Vitis vinifera HOM05D001156 ORTHO05D001006 4.3e-13 79.0 113 44.2
CsaV3_1G010160 Cucumis sativus L. HOM05D001156 ORTHO05D001006 5.6e-13 78.6 117 43.6
ECA234G3166 Erigeron canadensis HOM05D001156 ORTHO05D001006 5.6e-13 78.6 119 41.2
Nitab4.5_0000138g0090 Nicotiana tabacum HOM05D001156 ORTHO05D001006 5.6e-13 78.6 121 40.5
Dinv17478 Davidia involucrata HOM05D001156 ORTHO05D001006 9.6e-13 77.8 121 42.1
Gohir.A03G217800 Gossypium hirsutum HOM05D001156 ORTHO05D001006 9.6e-13 77.8 117 42.7
Gohir.D02G239800 Gossypium hirsutum HOM05D001156 ORTHO05D001006 9.6e-13 77.8 117 42.7
Gorai.005G268200 Gossypium raimondii HOM05D001156 ORTHO05D001006 9.6e-13 77.8 117 42.7
PGR042G0243 Punica granatum HOM05D001156 ORTHO05D001006 1.2e-12 77.4 120 44.2
Solyc02g031970.1 Solanum lycopersicum HOM05D001156 ORTHO05D001006 1.2e-12 77.4 121 41.3
PGSC0003DMG400014931 Solanum tuberosum HOM05D001156 ORTHO05D001006 1.6e-12 77.0 121 41.3
CiPaw.10G062700 Carya illinoinensis HOM05D001156 ORTHO05D001006 2.1e-12 76.6 118 40.7
TAR626G0967 Trochodendron aralioides HOM05D001156 ORTHO05D001006 2.8e-12 76.3 135 39.3
CiPaw.09G074700 Carya illinoinensis HOM05D001156 ORTHO05D001006 3.6e-12 75.9 118 41.5
PGR119G1972 Punica granatum HOM05D001156 ORTHO05D001006 3.6e-12 75.9 120 42.5
RcHm_v2.0_Chr5g0020611 Rosa chinensis HOM05D001156 ORTHO05D001006 4.7e-12 75.5 117 41.9
Sopen02g010230 Solanum pennellii HOM05D001156 ORTHO05D001006 4.7e-12 75.5 121 40.5
Lsat_1_v5_gn_5_99221 Lactuca sativa HOM05D001156 ORTHO05D001006 6.2e-12 75.1 120 41.7
CANSAT80G1509 Cannabis sativa HOM05D001156 ORTHO05D001006 8.1e-12 74.7 118 39.8
Cc09_g05760 Coffea canephora HOM05D001156 ORTHO05D001006 8.1e-12 74.7 121 41.3
HanXRQChr12g0355891 Helianthus annuus HOM05D001156 ORTHO05D001006 8.1e-12 74.7 129 40.3
Cfa000678 Carpinus fangiana HOM05D001156 ORTHO05D001006 1.4e-11 73.9 116 42.2
Haze_06140 Corylus avellana HOM05D001156 ORTHO05D001006 1.4e-11 73.9 116 42.2
Peaxi162Scf00556g00055 Petunia axillaris HOM05D001156 ORTHO05D001006 1.4e-11 73.9 121 40.5
SGA_v2.0_scaffold175G39352 Striga asiatica HOM05D003927 ORTHO05D004905 1.4e-11 73.9 125 40.0
HanXRQChr16g0522361 Helianthus annuus HOM05D001156 ORTHO05D001006 1.8e-11 73.6 118 39.8
Lalb_Chr25g0284381 Lupinus albus HOM05D001156 ORTHO05D001006 2.4e-11 73.2 121 38.8
Manes.03G074200 Manihot esculenta HOM05D001156 ORTHO05D001006 2.4e-11 73.2 117 40.2
Prupe.4G115200 Prunus persica HOM05D001156 ORTHO05D001006 2.4e-11 73.2 121 41.3
Sed0005290 Sechium edule HOM05D001156 ORTHO05D001006 2.4e-11 73.2 112 42.0
DCAR_024217 Daucus carota HOM05D001156 ORTHO05D001006 3.1e-11 72.8 124 39.5
FAN16G2237 Fragaria x ananassa HOM05D001156 ORTHO05D001006 3.1e-11 72.8 117 41.9
FAN21G1329 Fragaria x ananassa HOM05D001156 ORTHO05D001006 3.1e-11 72.8 117 41.9
FAN25G1424 Fragaria x ananassa HOM05D001156 ORTHO05D001006 3.1e-11 72.8 117 41.9
Sabra03G0045500 Salix brachista HOM05D001156 ORTHO05D001006 3.1e-11 72.8 113 41.6
TWI15G0681 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 4.0e-11 72.4 112 42.9
DCAR_004338 Daucus carota HOM05D001156 ORTHO05D001006 5.2e-11 72.0 124 39.5
CAN.G1492.7 Capsicum annuum HOM05D001156 ORTHO05D001006 6.8e-11 71.6 122 39.3
CDE02G1717 Ceratophyllum demersum HOM05D000742 ORTHO05D001006 6.8e-11 71.6 124 37.1
AUR62025583 Chenopodium quinoa HOM05D001156 ORTHO05D001006 6.8e-11 71.6 133 36.1
FvH4_3g12640 Fragaria vesca HOM05D001156 ORTHO05D001006 6.8e-11 71.6 117 41.9
AUR62001367 Chenopodium quinoa HOM05D001156 ORTHO05D001006 1.2e-10 70.9 133 36.1
Lj1P1147T19 Lonicera japonica HOM05D001156 ORTHO05D001006 1.2e-10 70.9 105 43.8
AL2G29480 Arabidopsis lyrata HOM05D001156 ORTHO05D001006 1.5e-10 70.5 117 40.2
QL11p013638 Quercus lobata HOM05D001156 ORTHO05D001006 1.5e-10 70.5 116 40.5
TWI38G0313 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 1.5e-10 70.5 112 42.9
Aqoxy3G04261 Aquilegia oxysepala HOM05D001156 ORTHO05D001006 3.4e-10 69.3 136 34.6
Sp6g12180 Schrenkiella parvula HOM05D001156 ORTHO05D001006 3.4e-10 69.3 112 40.2
Thecc.02G006100 Theobroma cacao HOM05D001156 ORTHO05D001006 3.4e-10 69.3 128 38.3
AT1G70190 Arabidopsis thaliana HOM05D001156 ORTHO05D001006 4.4e-10 68.9 112 40.2
Hma1.2p1_0327F.1_g126500 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 5.8e-10 68.6 121 38.8
Cpa.g.sc33.37 Carica papaya HOM05D001156 ORTHO05D001006 7.6e-10 68.2 118 41.5
Potri.003G074800 Populus trichocarpa HOM05D001156 ORTHO05D001006 7.6e-10 68.2 113 38.9
Phvul.005G074800 Phaseolus vulgaris HOM05D001156 ORTHO05D001006 9.9e-10 67.8 122 35.2
THA.LOC104811737 Tarenaya hassleriana HOM05D001156 ORTHO05D001006 9.9e-10 67.8 120 39.2
CARHR063310 Cardamine hirsuta HOM05D001156 ORTHO05D001006 1.3e-09 67.4 111 40.5
COL.COLO4_17636 Corchorus olitorius HOM05D001156 ORTHO05D001006 1.3e-09 67.4 104 42.3
Duzib248G0830 Durio zibethinus HOM05D001156 ORTHO05D001006 1.3e-09 67.4 129 37.2
TPR.G28435 Trifolium pratense HOM05D001156 ORTHO05D001006 1.3e-09 67.4 119 37.8
BcaB03g15533 Brassica carinata HOM05D001156 ORTHO05D001006 1.7e-09 67.0 116 37.9
Hund08877 Selenicereus undatus HOM05D001156 ORTHO05D001006 1.7e-09 67.0 122 38.5
Carub.0002s1688 Capsella rubella HOM05D001156 ORTHO05D001006 2.9e-09 66.2 121 38.8
EL10Ac3g06332 Beta vulgaris HOM05D001156 ORTHO05D001006 3.8e-09 65.9 134 35.8
MD10G1229600 Malus domestica HOM05D001156 ORTHO05D001006 3.8e-09 65.9 114 40.4
Solyc11g071530.1 Solanum lycopersicum HOM05D001156 ORTHO05D001006 3.8e-09 65.9 108 38.9
Sopen11g029220 Solanum pennellii HOM05D001156 ORTHO05D001006 3.8e-09 65.9 108 38.9
PGSC0003DMG400018715 Solanum tuberosum HOM05D001156 ORTHO05D001006 3.8e-09 65.9 108 38.9
VMungo1080G1379 Vigna mungo HOM05D001156 ORTHO05D001006 3.8e-09 65.9 115 36.5
Thhalv10019124m.g Eutrema salsugineum HOM05D001156 ORTHO05D001006 4.9e-09 65.5 116 39.7
Lj3g0004919 Lotus japonicus HOM05D001156 ORTHO05D001006 4.9e-09 65.5 119 36.1
Lalb_Chr01g0015551 Lupinus albus HOM05D001156 ORTHO05D001006 4.9e-09 65.5 119 37.0
TPR.G29154 Trifolium pratense HOM05D001156 ORTHO05D001006 4.9e-09 65.5 119 37.0
Psat1g015120 Pisum sativum HOM05D001156 ORTHO05D001006 6.4e-09 65.1 119 36.1
Psat3g150240 Pisum sativum HOM05D001156 ORTHO05D001006 6.4e-09 65.1 119 35.3
Lsat_1_v5_gn_8_95040 Lactuca sativa HOM05D001156 ORTHO05D001006 8.4e-09 64.7 102 40.2
Glyma.08G164000 Glycine max HOM05D001156 ORTHO05D001006 1.1e-08 64.3 123 35.0
Medtr2g064300 Medicago truncatula HOM05D001156 ORTHO05D001006 1.1e-08 64.3 119 37.0
SEGI_12175 Sequoiadendron giganteum HOM05D001156 ORTHO05D001006 1.1e-08 64.3 109 37.6
Aa31LG4G10710 Aethionema arabicum HOM05D001156 ORTHO05D001006 1.4e-08 63.9 113 40.7
BcaC08g45837 Brassica carinata HOM05D001156 ORTHO05D001006 1.4e-08 63.9 116 37.1
BolC6t38745H Brassica oleracea HOM05D001156 ORTHO05D001006 1.4e-08 63.9 116 37.1
Glyma.15G263200 Glycine max HOM05D001156 ORTHO05D001006 1.4e-08 63.9 124 34.7
Ah.15g094680 Amaranthus hybridus HOM05D001156 ORTHO05D001006 2.4e-08 63.2 108 37.0
Ca_07501_v3 Cicer arietinum L. HOM05D001156 ORTHO05D001006 2.4e-08 63.2 115 36.5
Medtr7g053520 Medicago truncatula HOM05D001156 ORTHO05D001006 3.2e-08 62.8 115 35.7
C06p36240 Brassica napus HOM05D001156 ORTHO05D001006 4.2e-08 62.4 116 37.1
Atru.chr10.430 Acer truncatum HOM05D001156 ORTHO05D001006 5.4e-08 62.0 114 40.4
Ca_03176_v3 Cicer arietinum L. HOM05D001156 ORTHO05D001006 5.4e-08 62.0 113 35.4
Thhalv10026763m.g Eutrema salsugineum HOM05D001156 ORTHO05D001006 7.1e-08 61.6 117 36.8
Sp5g25310 Schrenkiella parvula HOM05D001156 ORTHO05D001006 9.3e-08 61.2 115 37.4
arahy.Tifrunner.gnm1.ann1.IVE24N Arachis hypogaea HOM05D001156 ORTHO05D001006 1.2e-07 60.8 119 35.3
Phvul.007G244500 Phaseolus vulgaris HOM05D001156 ORTHO05D001006 1.2e-07 60.8 115 34.8
BraA07t30752Z Brassica rapa HOM05D001156 ORTHO05D001006 1.6e-07 60.5 114 36.0
CAN.G439.33 Capsicum annuum HOM05D001156 ORTHO05D001006 2.7e-07 59.7 108 37.0
Actinidia22420 Actinidia chinensis HOM05D001156 ORTHO05D001006 3.5e-07 59.3 44 56.8
A07p31190 Brassica napus HOM05D001156 ORTHO05D001006 3.5e-07 59.3 114 36.0
SalBow8G3377 Salvia bowleyana HOM05D001156 ORTHO05D001006 6.6e-06 55.1 117 35.9


User provided reference genes

Program Settings