Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G116 Amborella trichopoda HOM05D000835 ORTHO05D031115 3.4e-74 281.6 143 100.0
QL01p016405 Quercus lobata HOM05D000835 ORTHO05D007655 5.2e-46 188.0 140 72.9
Cfa009920 Carpinus fangiana HOM05D000835 ORTHO05D007655 1.2e-45 186.8 139 74.1
Glyma.19G111600 Glycine max HOM05D000835 ORTHO05D007655 3.4e-45 185.3 139 65.5
Actinidia03881 Actinidia chinensis HOM05D000835 ORTHO05D007655 4.4e-45 184.9 138 71.7
Haze_23278 Corylus avellana HOM05D000835 ORTHO05D007655 7.5e-45 184.1 139 73.4
TPR.G14630 Trifolium pratense HOM05D000835 ORTHO05D007655 7.5e-45 184.1 140 65.0
Migut.G00793 Erythranthe guttata HOM05D000835 ORTHO05D007655 3.7e-44 181.8 137 67.2
PGR102G2314 Punica granatum HOM05D000835 ORTHO05D007655 3.7e-44 181.8 142 69.7
Phvul.003G003900 Phaseolus vulgaris HOM05D000835 ORTHO05D007655 4.8e-44 181.4 140 66.4
Thecc.01G127400 Theobroma cacao HOM05D000835 ORTHO05D007655 4.8e-44 181.4 139 69.8
Rhsim08G0237400 Rhododendron simsii HOM05D000835 ORTHO05D007655 6.3e-44 181.0 138 70.3
VMungo0647G1181 Vigna mungo HOM05D000835 ORTHO05D007655 8.3e-44 180.6 140 65.7
Aqoxy2G02907 Aquilegia oxysepala HOM05D000835 ORTHO05D007655 1.1e-43 180.3 138 70.3
COL.COLO4_14020 Corchorus olitorius HOM05D000835 ORTHO05D007655 1.4e-43 179.9 139 67.6
Lj2P836T4 Lonicera japonica HOM05D000835 ORTHO05D007655 1.8e-43 179.5 139 71.2
Lalb_Chr11g0073081 Lupinus albus HOM05D000835 ORTHO05D007655 2.4e-43 179.1 144 68.8
Gohir.A12G232600 Gossypium hirsutum HOM05D000835 ORTHO05D007655 4.1e-43 178.3 139 69.8
Psat4g027720 Pisum sativum HOM05D000835 ORTHO05D007655 5.4e-43 177.9 141 66.0
Gohir.D12G234800 Gossypium hirsutum HOM05D000835 ORTHO05D007655 7.0e-43 177.6 139 69.8
Gorai.008G251100 Gossypium raimondii HOM05D000835 ORTHO05D007655 7.0e-43 177.6 139 69.8
Nn6g34584 Nelumbo nucifera HOM05D000835 ORTHO05D007655 7.0e-43 177.6 139 68.3
Sc11g0003980 Simmondsia chinensis HOM05D000835 ORTHO05D007655 7.0e-43 177.6 138 70.3
CiPaw.13G147400 Carya illinoinensis HOM05D000835 ORTHO05D007655 9.1e-43 177.2 139 68.3
Glyma.09G283700 Glycine max HOM05D000835 ORTHO05D007655 9.1e-43 177.2 139 64.0
Sopen11g029440 Solanum pennellii HOM05D000835 ORTHO05D007655 1.2e-42 176.8 139 70.5
arahy.Tifrunner.gnm1.ann1.3FQW2E Arachis hypogaea HOM05D000835 ORTHO05D007655 1.6e-42 176.4 143 63.6
Solyc11g071770.1 Solanum lycopersicum HOM05D000835 ORTHO05D007655 1.6e-42 176.4 139 70.5
PGSC0003DMG400002992 Solanum tuberosum HOM05D000835 ORTHO05D007655 1.6e-42 176.4 139 71.2
Ca_12421_v3 Cicer arietinum L. HOM05D000835 ORTHO05D007655 2.0e-42 176.0 139 64.0
Lsat_1_v5_gn_8_25560 Lactuca sativa HOM05D000835 ORTHO05D007655 2.7e-42 175.6 139 68.3
Manes.11G105000 Manihot esculenta HOM05D000835 ORTHO05D007655 2.7e-42 175.6 140 67.9
arahy.Tifrunner.gnm1.ann1.0BXH0B Arachis hypogaea HOM05D000835 ORTHO05D007655 3.5e-42 175.3 143 63.6
Peaxi162Scf00259g00019 Petunia axillaris HOM05D000835 ORTHO05D007655 3.5e-42 175.3 139 70.5
MSTRG.10400 Avicennia marina HOM05D000835 ORTHO05D007655 4.5e-42 174.9 139 66.9
Cc01_g07990 Coffea canephora HOM05D000835 ORTHO05D007655 4.5e-42 174.9 138 70.3
Ah.08g222340 Amaranthus hybridus HOM05D000835 ORTHO05D007655 5.9e-42 174.5 137 67.2
CANSAT54G0347 Cannabis sativa HOM05D000835 ORTHO05D007655 5.9e-42 174.5 137 68.6
CAN.G742.24 Capsicum annuum HOM05D000835 ORTHO05D007655 5.9e-42 174.5 138 69.6
ECA233G2238 Erigeron canadensis HOM05D000835 ORTHO05D007655 5.9e-42 174.5 139 66.2
CSS0030129 Camellia sinensis var. sinensis HOM05D000835 ORTHO05D007655 7.7e-42 174.1 139 69.1
Dinv18870 Davidia involucrata HOM05D000835 ORTHO05D007655 1.0e-41 173.7 140 70.7
Oeu051478.1 Olea europaea HOM05D000835 ORTHO05D007655 1.0e-41 173.7 138 68.1
MD10G1213300 Malus domestica HOM05D000835 ORTHO05D007655 1.3e-41 173.3 140 67.1
Eucgr.B02912 Eucalyptus grandis HOM05D000835 ORTHO05D007655 1.7e-41 172.9 140 70.7
Prupe.4G129900 Prunus persica HOM05D000835 ORTHO05D007655 1.7e-41 172.9 141 68.1
Ciclev10030601m.g Citrus clementina HOM05D000835 ORTHO05D007655 2.9e-41 172.2 138 68.8
Duzib147G1214 Durio zibethinus HOM05D000835 ORTHO05D007655 2.9e-41 172.2 139 67.6
Medtr4g119340 Medicago truncatula HOM05D000835 ORTHO05D007655 2.9e-41 172.2 139 62.6
Nn7g38301 Nelumbo nucifera HOM05D000835 ORTHO05D007655 3.8e-41 171.8 139 67.6
Nitab4.5_0002426g0040 Nicotiana tabacum HOM05D000835 ORTHO05D007655 3.8e-41 171.8 139 69.1
SalBow3G1027 Salvia bowleyana HOM05D000835 ORTHO05D007655 3.8e-41 171.8 138 63.8
TAR374G1323 Trochodendron aralioides HOM05D000835 ORTHO05D007655 3.8e-41 171.8 139 67.6
BcaB06g26420 Brassica carinata HOM05D000835 ORTHO05D007655 5.0e-41 171.4 138 64.5
Lj1g0017347 Lotus japonicus HOM05D000835 ORTHO05D007655 5.0e-41 171.4 135 64.4
Hma1.2p1_1811F.1_g303580 Hydrangea macrophylla HOM05D000835 ORTHO05D007655 1.1e-40 170.2 139 69.1
Dinv32150 Davidia involucrata HOM05D000835 ORTHO05D007655 2.5e-40 169.1 139 68.3
Sabra09G0120400 Salix brachista HOM05D000835 ORTHO05D007655 2.5e-40 169.1 126 69.8
Nitab4.5_0002498g0060 Nicotiana tabacum HOM05D000835 ORTHO05D007655 4.2e-40 168.3 139 68.3
TWI53G1197 Tripterygium wilfordii HOM05D000835 ORTHO05D007655 5.5e-40 167.9 141 67.4
HanXRQChr08g0217071 Helianthus annuus HOM05D000835 ORTHO05D007655 9.5e-40 167.2 138 64.5
Thhalv10019976m.g Eutrema salsugineum HOM05D000835 ORTHO05D007655 1.2e-39 166.8 125 67.2
CDE07G0289 Ceratophyllum demersum HOM05D000835 ORTHO05D007655 1.6e-39 166.4 140 65.0
EL10Ac7g16262 Beta vulgaris HOM05D000835 ORTHO05D007655 2.1e-39 166.0 142 61.3
PSO238G0019 Papaver somniferum HOM05D000835 ORTHO05D007655 2.1e-39 166.0 138 63.0
AT3G22980 Arabidopsis thaliana HOM05D000835 ORTHO05D007655 2.8e-39 165.6 138 63.0
PSO210G1464 Papaver somniferum HOM05D000835 ORTHO05D007655 2.8e-39 165.6 138 63.0
AL3G37390 Arabidopsis lyrata HOM05D000835 ORTHO05D007655 4.7e-39 164.9 138 63.0
Carub.0003s2314 Capsella rubella HOM05D000835 ORTHO05D007655 4.7e-39 164.9 138 63.0
CARHR098920 Cardamine hirsuta HOM05D000835 ORTHO05D007655 6.1e-39 164.5 138 62.3
SGA_v2.0_scaffold12G06248 Striga asiatica HOM05D000835 ORTHO05D007655 6.1e-39 164.5 137 62.0
A05p25720 Brassica napus HOM05D000835 ORTHO05D007655 8.0e-39 164.1 138 60.9
Potri.009G152500 Populus trichocarpa HOM05D000835 ORTHO05D007655 1.0e-38 163.7 126 68.3
BraA05t21453Z Brassica rapa HOM05D000835 ORTHO05D007655 1.8e-38 162.9 138 60.9
Sp3g20670 Schrenkiella parvula HOM05D000835 ORTHO05D007655 1.8e-38 162.9 138 62.3
MBI04_g45345_MAGBIO Magnolia biondii HOM05D000835 ORTHO05D007655 2.3e-38 162.5 116 74.1
unitig_27.g25353 Utricularia gibba HOM05D000835 ORTHO05D007655 3.0e-38 162.2 137 60.6
unitig_28.g29436 Utricularia gibba HOM05D000835 ORTHO05D007655 3.0e-38 162.2 137 60.6
BcaC05g27990 Brassica carinata HOM05D000835 ORTHO05D007655 4.0e-38 161.8 138 61.6
C05p40010 Brassica napus HOM05D000835 ORTHO05D007655 4.0e-38 161.8 138 61.6
BolC5t32747H Brassica oleracea HOM05D000835 ORTHO05D007655 4.0e-38 161.8 138 61.6
PSO801G0441 Papaver somniferum HOM05D000835 ORTHO05D007655 5.2e-38 161.4 138 62.3
HPP92_017079 Vanilla planifolia HOM05D000835 ORTHO05D007655 8.9e-38 160.6 138 60.1
ClCG09G010670 Citrullus lanatus HOM05D000835 ORTHO05D007655 1.5e-37 159.8 141 62.4
Aa31LG8G9480 Aethionema arabicum HOM05D000835 ORTHO05D007655 4.4e-37 158.3 138 62.3
SEGI_39423 Sequoiadendron giganteum HOM05D000835 ORTHO05D007655 4.4e-37 158.3 137 59.9
Atru.chr6.1375 Acer truncatum HOM05D000835 ORTHO05D007655 9.8e-37 157.1 137 61.3
SHI25283 Sapria himalayana HOM05D000835 ORTHO05D007655 2.2e-36 156.0 138 60.1
CsaV3_7G021670 Cucumis sativus L. HOM05D000835 ORTHO05D007655 3.7e-36 155.2 141 61.0
MELO3C013183.2 Cucumis melo HOM05D000835 ORTHO05D007655 4.9e-36 154.8 140 60.7
Sed0018542 Sechium edule HOM05D000835 ORTHO05D007655 1.8e-35 152.9 140 61.4
AUR62020200 Chenopodium quinoa HOM05D000835 ORTHO05D007655 2.4e-35 152.5 135 58.5
AUR62001583 Chenopodium quinoa HOM05D000835 ORTHO05D007655 9.2e-35 150.6 135 57.8
Ca_13611_v3 Cicer arietinum L. HOM05D000835 ORTHO05D007655 2.0e-34 149.4 109 67.0
Ca_13612_v3 Cicer arietinum L. HOM05D000835 ORTHO05D031115 2.7e-34 149.1 109 67.0
Lj2A837G8 Lonicera japonica HOM05D000835 ORTHO05D007655 1.3e-33 146.7 137 63.5
Os03g0650700 Oryza sativa ssp. japonica HOM05D000835 ORTHO05D007655 1.3e-33 146.7 138 52.2
RcHm_v2.0_Chr6g0274771 Rosa chinensis HOM05D000835 ORTHO05D007655 1.7e-33 146.4 139 58.3
DCAR_001041 Daucus carota HOM05D000835 ORTHO05D007655 2.3e-33 146.0 140 59.3
SMO367G1260 Selaginella moellendorffii HOM05D000835 ORTHO05D007655 2.5e-32 142.5 138 54.3
A01p21380 Brassica napus HOM05D000835 ORTHO05D007655 5.6e-32 141.4 136 55.9
FAN25G3716 Fragaria x ananassa HOM05D000835 ORTHO05D007655 1.6e-31 139.8 139 56.1
FAN21G3290 Fragaria x ananassa HOM05D000835 ORTHO05D007655 2.1e-31 139.4 139 56.8
FAN16G0727 Fragaria x ananassa HOM05D000835 ORTHO05D007655 6.1e-31 137.9 139 56.1
Mapoly0095s0055 Marchantia polymorpha HOM05D000835 ORTHO05D007655 8.0e-31 137.5 135 55.6
FvH4_3g14510 Fragaria vesca HOM05D000835 ORTHO05D007655 1.8e-30 136.3 139 56.1
FAN11G2664 Fragaria x ananassa HOM05D000835 ORTHO05D007655 2.3e-30 136.0 139 56.1
Zm00001eb052970 Zea mays HOM05D000835 ORTHO05D007655 2.0e-29 132.9 132 50.0
SEGI_16837 Sequoiadendron giganteum HOM05D000835 ORTHO05D031115 4.1e-27 125.2 118 57.6
Pp3c17_21830 Physcomitrium patens HOM05D000835 ORTHO05D007655 7.0e-27 124.4 136 50.0
AagrBONN_evm.TU.Sc2ySwM_362.224 Anthoceros agrestis HOM05D000835 ORTHO05D007655 2.7e-26 122.5 137 49.6
FvH4_4g04800 Fragaria vesca HOM05D000835 ORTHO05D007655 9.5e-24 114.0 124 50.0
FAN12G0217 Fragaria x ananassa HOM05D000835 ORTHO05D007655 9.5e-24 114.0 124 50.0
GSVIVG01026440001 Vitis vinifera HOM05D000835 ORTHO05D007655 4.7e-23 111.7 71 76.1
CBR_g53556 Chara braunii HOM05D000835 ORTHO05D007655 1.8e-22 109.8 169 40.8
SMO361G0467 Selaginella moellendorffii HOM05D000835 ORTHO05D007655 2.2e-20 102.8 136 43.4
FAN22G1188 Fragaria x ananassa HOM05D000835 ORTHO05D007655 3.0e-17 92.4 139 43.2
Cre13.g564950 Chlamydomonas reinhardtii HOM05D000835 ORTHO05D007655 4.7e-15 85.1 142 35.9
Cfa025935 Carpinus fangiana HOM05D000835 ORTHO05D007655 3.1e-14 82.4 104 38.5
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 4.0e-14 82.0 124 44.4
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 4.0e-14 82.0 124 44.4
MCO13G577 Micromonas commoda HOM05D000835 ORTHO05D007655 1.7e-12 76.6 144 33.3
VMungo0720G0297 Vigna mungo HOM05D000835 ORTHO05D007655 2.2e-12 76.3 69 56.5
PRCOL_00005628 Prasinoderma coloniale HOM05D000835 ORTHO05D007655 9.2e-11 70.9 133 32.3
VMungo1127G0719 Vigna mungo HOM05D000835 ORTHO05D433350 6.0e-10 68.2 82 47.6
VMungo1215G1231 Vigna mungo HOM05D000835 ORTHO05D007655 7.8e-10 67.8 69 52.2
SMO364G0415 Selaginella moellendorffii HOM05D000835 ORTHO05D002122 1.6e-07 60.1 85 32.9
CBR_g8750 Chara braunii HOM05D000835 ORTHO05D002122 1.1e-06 57.4 101 32.7
Os02g0543300 Oryza sativa ssp. japonica HOM05D000835 ORTHO05D007655 1.8e-06 56.6 139 29.5
Os01g0723000 Oryza sativa ssp. japonica HOM05D000835 ORTHO05D002122 3.1e-06 55.8 97 33.0
CBR_g57047 Chara braunii HOM05D000835 ORTHO05D002122 4.0e-06 55.5 101 31.7
COL.COLO4_27866 Corchorus olitorius HOM05D000835 ORTHO05D002122 6.8e-06 54.7 101 31.7


User provided reference genes

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