Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 3.8e-87 324.7 152 100.0
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 6.3e-58 227.6 143 82.5
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 3.9e-44 181.8 98 89.8
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 5.2e-44 181.4 98 89.8
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 3.3e-43 178.7 98 88.8
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 3.3e-43 178.7 98 88.8
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 7.4e-43 177.6 95 89.5
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 9.7e-43 177.2 98 88.8
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 9.7e-43 177.2 98 88.8
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 1.3e-42 176.8 98 88.8
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 1.7e-42 176.4 98 88.8
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 2.8e-42 175.6 98 87.8
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 3.7e-42 175.3 108 79.6
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 4.8e-42 174.9 98 87.8
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 6.3e-42 174.5 98 87.8
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 8.2e-42 174.1 108 79.6
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 1.1e-41 173.7 98 87.8
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 1.8e-41 172.9 98 87.8
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 2.4e-41 172.6 98 86.7
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 2.4e-41 172.6 141 65.2
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 2.4e-41 172.6 98 86.7
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 2.4e-41 172.6 98 86.7
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 2.4e-41 172.6 98 86.7
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 2.4e-41 172.6 98 86.7
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 2.4e-41 172.6 98 86.7
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 2.4e-41 172.6 98 86.7
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 4.1e-41 171.8 108 79.6
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 4.1e-41 171.8 98 87.8
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 4.1e-41 171.8 98 85.7
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 4.1e-41 171.8 98 86.7
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 5.3e-41 171.4 96 88.5
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 5.3e-41 171.4 98 84.7
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 5.3e-41 171.4 98 84.7
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 5.3e-41 171.4 98 84.7
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 5.3e-41 171.4 98 84.7
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 5.3e-41 171.4 98 84.7
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 5.3e-41 171.4 98 84.7
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 2.0e-40 169.5 98 86.7
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 3.5e-40 168.7 98 86.7
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 4.5e-40 168.3 98 84.7
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 5.9e-40 167.9 98 84.7
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 5.9e-40 167.9 98 83.7
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 5.9e-40 167.9 98 83.7
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 5.9e-40 167.9 98 83.7
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 7.7e-40 167.5 98 85.7
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 1.0e-39 167.2 88 89.8
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 2.2e-39 166.0 98 81.6
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 3.8e-39 165.2 91 86.8
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 6.5e-39 164.5 98 84.7
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.9e-38 162.9 98 81.6
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.9e-38 162.9 98 80.6
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 5.5e-38 161.4 98 82.7
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 2.7e-37 159.1 98 84.7
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 2.7e-37 159.1 98 78.6
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 6.1e-37 157.9 98 81.6
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 1.4e-36 156.8 89 86.5
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 5.7e-35 151.4 80 90.0
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.3e-34 150.2 98 80.6
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 2.8e-34 149.1 97 79.4
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 1.1e-33 147.1 98 77.6
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 4.1e-33 145.2 88 83.0
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.3e-33 144.8 91 78.0
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 9.1e-33 144.1 77 89.6
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 8.5e-31 137.5 94 77.7
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 5.5e-30 134.8 73 89.0
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 7.2e-30 134.4 79 83.5
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 2.1e-29 132.9 77 81.8
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 4.7e-29 131.7 75 85.3
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 6.1e-29 131.3 98 72.4
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.5e-27 126.7 69 87.0
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.2e-26 122.9 106 62.3
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 3.7e-26 122.1 72 80.6
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 8.3e-26 120.9 79 74.7
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.4e-25 120.2 68 85.3
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 1.3e-23 113.6 74 81.1
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 2.5e-22 109.4 65 84.6
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 3.2e-22 109.0 65 81.5
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 7.2e-22 107.8 60 86.7
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 2.0e-19 99.8 69 73.9
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 9.8e-19 97.4 91 52.7
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 2.2e-18 96.3 57 87.7
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 3.7e-18 95.5 58 81.0
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 8.6e-15 84.3 68 63.2
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 6.1e-13 78.2 55 74.5
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 3.5e-08 62.4 34 85.3


User provided reference genes

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