Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0691G267 Amborella trichopoda HOM05D003926 ORTHO05D005273 0.0e+00 9774.0 4991 100.0
ATR1101G059 Amborella trichopoda HOM05D003926 ORTHO05D005273 0.0e+00 9413.9 4991 96.4
Nn3g17538 Nelumbo nucifera HOM05D003926 ORTHO05D005273 0.0e+00 6408.2 5135 65.1
MBI15_g05000_MAGBIO Magnolia biondii HOM05D003926 ORTHO05D005273 0.0e+00 6372.3 4857 68.0
TAR374G0863 Trochodendron aralioides HOM05D003926 ORTHO05D005273 0.0e+00 6278.0 4865 67.1
Aqoxy3G03752 Aquilegia oxysepala HOM05D003926 ORTHO05D005273 0.0e+00 6211.7 5133 63.7
PSO063G5950 Papaver somniferum HOM05D003926 ORTHO05D005273 0.0e+00 6210.9 5128 63.4
PSO782G5674 Papaver somniferum HOM05D003926 ORTHO05D005273 0.0e+00 6209.4 5128 63.4
CSS0002647 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 0.0e+00 6138.9 5139 62.3
CSS0025257 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 0.0e+00 6135.4 5139 62.2
Prupe.3G248400 Prunus persica HOM05D003926 ORTHO05D005273 0.0e+00 6135.1 5145 62.1
TAR622G1093 Trochodendron aralioides HOM05D003926 ORTHO05D005273 0.0e+00 6134.3 4748 67.0
QL02p065183 Quercus lobata HOM05D003926 ORTHO05D005273 0.0e+00 6130.8 5174 62.3
Actinidia18083 Actinidia chinensis HOM05D003926 ORTHO05D005273 0.0e+00 6096.5 5132 62.2
MD09G1075600 Malus domestica HOM05D003926 ORTHO05D005273 0.0e+00 6049.2 5118 61.6
CiPaw.03G082600 Carya illinoinensis HOM05D003926 ORTHO05D005273 0.0e+00 6044.2 5033 62.8
RcHm_v2.0_Chr2g0164791 Rosa chinensis HOM05D003926 ORTHO05D005273 0.0e+00 6043.4 5146 61.5
Atru.chr8.620 Acer truncatum HOM05D003926 ORTHO05D005273 0.0e+00 6034.1 5127 61.7
Thecc.04G107500 Theobroma cacao HOM05D003926 ORTHO05D005273 0.0e+00 6030.3 5134 62.1
FvH4_6g46320 Fragaria vesca HOM05D003926 ORTHO05D005273 0.0e+00 6026.0 5141 61.3
Ciclev10010885m.g Citrus clementina HOM05D003926 ORTHO05D005273 0.0e+00 6000.2 5167 61.3
MD17G1066300 Malus domestica HOM05D003926 ORTHO05D005273 0.0e+00 5973.7 5120 61.4
Manes.02G059900 Manihot esculenta HOM05D003926 ORTHO05D005273 0.0e+00 5951.7 5146 61.0
Potri.017G101100 Populus trichocarpa HOM05D003926 ORTHO05D005273 0.0e+00 5944.8 5130 61.0
CANSAT64G0948 Cannabis sativa HOM05D003926 ORTHO05D005273 0.0e+00 5940.9 5140 61.0
Gorai.001G206500 Gossypium raimondii HOM05D003926 ORTHO05D005273 0.0e+00 5931.7 5125 61.4
Sabra17G0086900 Salix brachista HOM05D003926 ORTHO05D005273 0.0e+00 5914.7 5125 60.8
Duzib133G0169 Durio zibethinus HOM05D003926 ORTHO05D005273 0.0e+00 5913.2 5126 61.6
Lj4C124T8 Lonicera japonica HOM05D003926 ORTHO05D005273 0.0e+00 5900.5 5196 60.1
arahy.Tifrunner.gnm1.ann1.FDTJ9Q Arachis hypogaea HOM05D003926 ORTHO05D005273 0.0e+00 5880.1 5123 60.6
arahy.Tifrunner.gnm1.ann1.IQIT5J Arachis hypogaea HOM05D003926 ORTHO05D005273 0.0e+00 5875.0 5122 60.6
Cfa007698 Carpinus fangiana HOM05D003926 ORTHO05D005273 0.0e+00 5871.6 4844 63.4
Lj1g0024205 Lotus japonicus HOM05D003926 ORTHO05D005273 0.0e+00 5862.7 5117 60.1
CAN.G497.55 Capsicum annuum HOM05D003926 ORTHO05D005273 0.0e+00 5832.3 5025 60.8
TPR.G23405 Trifolium pratense HOM05D003926 ORTHO05D005273 0.0e+00 5826.9 5142 59.6
PGR004G0818 Punica granatum HOM05D003926 ORTHO05D005273 0.0e+00 5821.9 5132 60.1
Haze_14378 Corylus avellana HOM05D003926 ORTHO05D005273 0.0e+00 5816.1 5077 60.4
Medtr7g017100 Medicago truncatula HOM05D003926 ORTHO05D005273 0.0e+00 5804.6 5151 59.6
AUR62023153 Chenopodium quinoa HOM05D003926 ORTHO05D005273 0.0e+00 5799.6 5162 59.6
Cc07_g04520 Coffea canephora HOM05D003926 ORTHO05D005273 0.0e+00 5795.3 5148 59.7
Hund16238 Selenicereus undatus HOM05D003926 ORTHO05D005273 0.0e+00 5787.2 5131 59.8
Sopen02g034050 Solanum pennellii HOM05D003926 ORTHO05D005273 0.0e+00 5779.9 5149 59.5
Phvul.008G025700 Phaseolus vulgaris HOM05D003926 ORTHO05D005273 0.0e+00 5777.6 5141 59.1
TWI32G0285 Tripterygium wilfordii HOM05D003926 ORTHO05D005273 0.0e+00 5777.6 5141 59.7
AUR62009475 Chenopodium quinoa HOM05D003926 ORTHO05D005273 0.0e+00 5774.1 5143 59.5
HanXRQChr15g0464821 Helianthus annuus HOM05D003926 ORTHO05D005273 0.0e+00 5774.1 5138 59.8
Solyc02g089260.4 Solanum lycopersicum HOM05D003926 ORTHO05D005273 0.0e+00 5766.0 5152 59.3
Glyma.18G275200 Glycine max HOM05D003926 ORTHO05D005273 0.0e+00 5761.4 5147 59.2
ECA232G4780 Erigeron canadensis HOM05D003926 ORTHO05D005273 0.0e+00 5760.3 5129 59.3
ClCG11G004990 Citrullus lanatus HOM05D003926 ORTHO05D005273 0.0e+00 5747.2 5185 58.9
Duzib211G0130 Durio zibethinus HOM05D003926 ORTHO05D005273 0.0e+00 5736.4 5120 60.1
MELO3C022053.2 Cucumis melo HOM05D003926 ORTHO05D005273 0.0e+00 5722.5 5137 59.1
Lalb_Chr21g0318281 Lupinus albus HOM05D003926 ORTHO05D005273 0.0e+00 5722.5 5126 58.9
CsaV3_5G038720 Cucumis sativus L. HOM05D003926 ORTHO05D005273 0.0e+00 5717.1 5129 59.3
Rhsim10G0059600 Rhododendron simsii HOM05D003926 ORTHO05D005273 0.0e+00 5710.2 4801 62.1
SEGI_07483 Sequoiadendron giganteum HOM05D003926 ORTHO05D005273 0.0e+00 5700.9 5175 58.6
Lsat_1_v5_gn_4_173381 Lactuca sativa HOM05D003926 ORTHO05D005273 0.0e+00 5690.5 5154 59.1
EL10Ac2g04434 Beta vulgaris HOM05D003926 ORTHO05D005273 0.0e+00 5671.7 5151 58.7
MSTRG.23855 Avicennia marina HOM05D003926 ORTHO05D005273 0.0e+00 5645.5 5134 58.3
Sed0020046 Sechium edule HOM05D003926 ORTHO05D005273 0.0e+00 5642.4 5118 58.5
Ah.16g101010 Amaranthus hybridus HOM05D003926 ORTHO05D005273 0.0e+00 5590.8 5137 58.3
Psat3g203080 Pisum sativum HOM05D003926 ORTHO05D005273 0.0e+00 5588.1 5143 57.8
Sc14g0004890 Simmondsia chinensis HOM05D003926 ORTHO05D005273 0.0e+00 5586.5 5154 58.2
Dinv34905 Davidia involucrata HOM05D003926 ORTHO05D005273 0.0e+00 5580.8 4782 61.3
Ca_06914_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 0.0e+00 5575.0 4862 60.3
Ca_06916_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 0.0e+00 5575.0 4862 60.3
DCAR_011007 Daucus carota HOM05D003926 ORTHO05D005273 0.0e+00 5557.6 4872 59.8
Os09g0247700 Oryza sativa ssp. japonica HOM05D003926 ORTHO05D005273 0.0e+00 5504.5 5140 57.3
Aa31LG5G12790 Aethionema arabicum HOM05D003926 ORTHO05D005273 0.0e+00 5459.0 5132 56.9
THA.LOC104802985 Tarenaya hassleriana HOM05D003926 ORTHO05D005273 0.0e+00 5457.5 5109 57.1
AL3G11530 Arabidopsis lyrata HOM05D003926 ORTHO05D005273 0.0e+00 5447.5 5111 56.9
Thhalv10019869m.g Eutrema salsugineum HOM05D003926 ORTHO05D005273 0.0e+00 5446.7 5115 56.9
CARHR076230 Cardamine hirsuta HOM05D003926 ORTHO05D005273 0.0e+00 5440.5 5117 56.8
AT3G02260 Arabidopsis thaliana HOM05D003926 ORTHO05D005273 0.0e+00 5433.6 5115 56.6
Sp3g01330 Schrenkiella parvula HOM05D003926 ORTHO05D005273 0.0e+00 5417.0 5110 56.5
COL.COLO4_10659 Corchorus olitorius HOM05D003926 ORTHO05D005273 0.0e+00 5407.0 4151 67.8
C09p75640 Brassica napus HOM05D003926 ORTHO05D005273 0.0e+00 5402.4 5126 56.3
BolC5t35094H Brassica oleracea HOM05D003926 ORTHO05D005273 0.0e+00 5380.8 5129 56.2
BraA05t23147Z Brassica rapa HOM05D003926 ORTHO05D005273 0.0e+00 5365.4 5150 55.9
Carub.0003s0138 Capsella rubella HOM05D003926 ORTHO05D005273 0.0e+00 5363.5 4933 57.9
SGA_v2.0_scaffold52G19072 Striga asiatica HOM05D003926 ORTHO05D005273 0.0e+00 5326.1 4861 58.3
Lalb_Chr06g0174881 Lupinus albus HOM05D003926 ORTHO05D005273 0.0e+00 5307.7 5154 55.6
Zm00001eb308350 Zea mays HOM05D003926 ORTHO05D005273 0.0e+00 5170.5 4928 56.0
GSVIVG01036538001 Vitis vinifera HOM05D003926 ORTHO05D005273 0.0e+00 4987.5 4990 55.3
Mapoly0031s0115 Marchantia polymorpha HOM05D003926 ORTHO05D005273 0.0e+00 4670.5 5284 49.9
Peaxi162Scf00020g02342 Petunia axillaris HOM05D003926 ORTHO05D005273 0.0e+00 4546.9 3729 64.0
Pp3c11_22340 Physcomitrium patens HOM05D003926 ORTHO05D005273 0.0e+00 4478.7 5274 48.8
Pp3c7_7030 Physcomitrium patens HOM05D003926 ORTHO05D005273 0.0e+00 4353.5 5274 47.6
Lj1g0000156 Lotus japonicus HOM05D003926 ORTHO05D005273 0.0e+00 4295.7 3225 68.4
Migut.H00584 Erythranthe guttata HOM05D003926 ORTHO05D005273 0.0e+00 4200.6 3836 57.3
SMO361G0659 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 0.0e+00 4197.5 4838 49.2
CDE01G0304 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 0.0e+00 3826.6 3370 59.9
Nitab4.5_0001339g0050 Nicotiana tabacum HOM05D003926 ORTHO05D005273 0.0e+00 3669.4 4439 47.8
Gohir.D07G186000 Gossypium hirsutum HOM05D003926 ORTHO05D005273 0.0e+00 3455.6 2551 70.1
Gohir.A07G178700 Gossypium hirsutum HOM05D003926 ORTHO05D005273 0.0e+00 3452.1 2552 69.9
Eucgr.I02068 Eucalyptus grandis HOM05D003926 ORTHO05D005273 0.0e+00 3429.4 2651 67.5
vmacro05610 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 0.0e+00 3323.9 2417 71.2
Glyma.08G252650 Glycine max HOM05D003926 ORTHO05D005273 0.0e+00 3033.8 2313 68.1
CBR_g24086 Chara braunii HOM05D003926 ORTHO05D000048 0.0e+00 2988.4 6288 34.8
Dinv33870 Davidia involucrata HOM05D003926 ORTHO05D005273 0.0e+00 2979.1 2130 72.4
Gohir.A07G179100 Gossypium hirsutum HOM05D003926 ORTHO05D005273 0.0e+00 2812.7 2995 51.9
HPP92_020589 Vanilla planifolia HOM05D003926 ORTHO05D005273 0.0e+00 2770.3 2159 67.6
Glyma.08G252600 Glycine max HOM05D003926 ORTHO05D005273 0.0e+00 2742.6 2757 52.6
Cpa.g.sc14.238 Carica papaya HOM05D003926 ORTHO05D005273 0.0e+00 2701.0 2070 68.7
SHI25822 Sapria himalayana HOM05D003926 ORTHO05D005273 0.0e+00 2640.1 2477 57.9
BcaC05g30340 Brassica carinata HOM05D003926 ORTHO05D005273 0.0e+00 2559.6 2040 65.7
A05p45150 Brassica napus HOM05D003926 ORTHO05D005273 0.0e+00 2511.9 2887 48.1
A05p45140 Brassica napus HOM05D003926 ORTHO05D005273 0.0e+00 2476.4 1933 66.7
vmacro05611 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 0.0e+00 2356.3 2443 51.2
Dinv33869 Davidia involucrata HOM05D003926 ORTHO05D005273 0.0e+00 2295.0 2587 49.2
PGSC0003DMG401001381 Solanum tuberosum HOM05D003926 ORTHO05D005273 0.0e+00 2201.0 1512 72.9
Nitab4.5_0009887g0010 Nicotiana tabacum HOM05D003926 ORTHO05D005273 0.0e+00 2127.1 2448 48.0
BcaC05g30341 Brassica carinata HOM05D003926 ORTHO05D005273 0.0e+00 2125.1 2724 45.3
HPP92_020588 Vanilla planifolia HOM05D003926 ORTHO05D005273 0.0e+00 1810.8 2371 44.5
AagrBONN_evm.TU.Sc2ySwM_344.3761 Anthoceros agrestis HOM05D003926 ORTHO05D005273 0.0e+00 1789.2 2911 39.6
arahy.Tifrunner.gnm1.ann1.DT5ZWB Arachis hypogaea HOM05D003926 ORTHO05D005273 0.0e+00 1755.7 2068 47.1
SHI25820 Sapria himalayana HOM05D003926 ORTHO05D005273 0.0e+00 1749.2 2424 42.6
Gohir.A07G178901 Gossypium hirsutum HOM05D003926 ORTHO05D005273 0.0e+00 1537.7 1949 45.8
CDE01G0480 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 0.0e+00 1242.6 922 70.4
Rhsim05G0129500 Rhododendron simsii HOM05D003926 ORTHO05D005273 0.0e+00 1195.6 1733 42.8
SMO361G0392 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 0.0e+00 1126.7 1335 49.5
SMO199G0087 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 0.0e+00 1099.7 1318 49.2
Psat4g186360 Pisum sativum HOM05D003926 ORTHO05D005273 2.0e-301 1041.6 880 62.4
Atru.chr12.1304 Acer truncatum HOM05D003926 ORTHO05D005273 7.8e-290 1003.0 675 76.3
FAN09G1503 Fragaria x ananassa HOM05D003926 ORTHO05D005273 1.6e-282 978.8 1419 39.6
Migut.H00583 Erythranthe guttata HOM05D003926 ORTHO05D005273 1.6e-234 819.3 655 65.5
Psat4g179640 Pisum sativum HOM05D003926 ORTHO05D005273 1.0e-217 763.5 653 61.7
Rhsim05G0129300 Rhododendron simsii HOM05D003926 ORTHO05D005273 4.3e-195 688.3 537 66.9
MCO11G572 Micromonas commoda HOM05D003926 ORTHO05D005273 7.5e-192 677.6 4596 22.9
vmacro11260 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 1.1e-166 594.0 388 76.5
Sabra16G0314500 Salix brachista HOM05D004145 ORTHO05D004879 3.8e-159 568.9 751 48.1
Peaxi162Scf00020g02344 Petunia axillaris HOM05D003926 ORTHO05D005273 3.2e-142 512.7 980 34.8
Sabra16G0314400 Salix brachista HOM05D004145 ORTHO05D004879 7.5e-107 395.2 715 39.9
Actinidia36271 Actinidia chinensis HOM05D003926 ORTHO05D005273 3.1e-105 389.8 261 71.6
Psat7g201760 Pisum sativum HOM05D003926 ORTHO05D005273 2.7e-80 307.0 269 59.1
CSS0003920 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 8.9e-68 265.4 201 67.7
CSS0037899 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 1.1e-65 258.5 209 64.1
CSS0007096 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 6.6e-63 249.2 209 62.7
CSS0009757 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 4.3e-62 246.5 209 61.7
CDE01G0511 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 2.1e-61 244.2 421 34.2
Psat1g100800 Pisum sativum HOM05D003926 ORTHO05D005273 2.8e-61 243.8 222 57.2
Psat6g077960 Pisum sativum HOM05D003926 ORTHO05D005273 4.9e-58 233.0 217 58.1
PGSC0003DMG402001381 Solanum tuberosum HOM05D003926 ORTHO05D005273 3.5e-56 226.9 276 50.0
Psat7g201680 Pisum sativum HOM05D003926 ORTHO05D005273 4.6e-56 226.5 269 49.1
CSS0026086 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 1.5e-54 221.5 209 58.9
Oeu047260.2 Olea europaea HOM05D003926 ORTHO05D005273 5.6e-54 219.5 144 77.1
Psat3g106080 Pisum sativum HOM05D003926 ORTHO05D005273 1.6e-48 201.4 135 72.6
ATR0620G072 Amborella trichopoda HOM05D003059 ORTHO05D003414 3.2e-41 177.2 105 91.4
ATR0332G115 Amborella trichopoda HOM05D003926 ORTHO05D005273 3.6e-37 163.7 104 87.5
Psat2g086480 Pisum sativum HOM05D003926 ORTHO05D005273 2.4e-36 161.0 116 67.2
Rhsim10G0100000 Rhododendron simsii HOM05D003926 ORTHO05D005273 4.2e-33 150.2 133 64.7
Psat2g110320 Pisum sativum HOM05D003492 ORTHO05D005115 2.5e-30 141.0 137 58.4
Psat4g170760 Pisum sativum HOM05D003926 ORTHO05D005273 1.4e-28 135.2 105 62.9
Psat5g059720 Pisum sativum HOM05D000434 ORTHO05D007220 2.5e-25 124.4 188 43.1
ATR0564G481 Amborella trichopoda HOM05D000537 ORTHO05D000415 1.4e-17 98.6 63 77.8
BcaC05g29898 Brassica carinata HOM05D003926 ORTHO05D005273 2.5e-17 97.8 121 49.6
ATR0585G095 Amborella trichopoda HOM05D003926 ORTHO05D005273 3.6e-16 94.0 53 86.8
A05p29520 Brassica napus HOM05D003926 ORTHO05D005273 4.6e-16 93.6 606 22.3
Sabra11G0092200 Salix brachista HOM05D003926 ORTHO05D005273 5.1e-15 90.1 238 31.9
GSVIVG01005908001 Vitis vinifera HOM05D003926 ORTHO05D005273 1.5e-14 88.6 58 75.9
CDE01G0142 Ceratophyllum demersum HOM05D003926 ORTHO05D018213 1.3e-13 85.5 137 38.0
VMungo1383G2275 Vigna mungo HOM05D003926 ORTHO05D005273 1.3e-13 85.5 111 47.7
arahy.Tifrunner.gnm1.ann1.8KUK4W Arachis hypogaea HOM05D003926 ORTHO05D005273 1.4e-12 82.0 104 44.2
Hma1.2p1_0587F.1_g184120 Hydrangea macrophylla HOM05D003926 ORTHO05D005273 6.9e-12 79.7 52 67.3
Nn1g06304 Nelumbo nucifera HOM05D003926 ORTHO05D018213 9.1e-12 79.3 124 39.5
Actinidia36270 Actinidia chinensis HOM05D003926 ORTHO05D038129 1.1e-09 72.4 86 46.5
Psat7g160960 Pisum sativum HOM05D001399 ORTHO05D002785 5.5e-09 70.1 83 49.4
Pp3c22_5030 Physcomitrium patens HOM05D000005 ORTHO05D000239 9.4e-09 69.3 50 56.0
CAN.G8.6 Capsicum annuum HOM05D003926 ORTHO05D010611 1.6e-08 68.6 201 31.3
Dinv36991 Davidia involucrata HOM05D003926 ORTHO05D038129 3.6e-08 67.4 57 50.9
Eucgr.I02066 Eucalyptus grandis HOM05D003926 ORTHO05D018213 1.4e-07 65.5 125 35.2
Actinidia14026 Actinidia chinensis HOM05D003926 ORTHO05D018213 2.3e-07 64.7 102 37.3
Pp3c10_21680 Physcomitrium patens HOM05D000005 ORTHO05D000239 3.9e-07 63.9 91 40.7
Pp3c10_21693 Physcomitrium patens HOM05D000005 ORTHO05D000239 3.9e-07 63.9 59 50.8
Psat1g150120 Pisum sativum HOM05D003313 ORTHO05D004217 3.9e-07 63.9 40 75.0
Sp7g04320 Schrenkiella parvula HOM05D003926 ORTHO05D005273 5.1e-07 63.5 74 36.5
Psat3g105800 Pisum sativum HOM05D000129 ORTHO05D007829 8.8e-07 62.8 41 65.9
Psat7g240480 Pisum sativum HOM05D000029 ORTHO05D037355 1.5e-06 62.0 47 61.7
CDE02G3037 Ceratophyllum demersum HOM05D003926 ORTHO05D018213 2.6e-06 61.2 77 41.6
A05p29570 Brassica napus HOM05D003926 ORTHO05D010327 3.3e-06 60.8 267 24.7
Psat3g091240 Pisum sativum HOM05D000942 ORTHO05D000918 7.4e-06 59.7 76 44.7


User provided reference genes

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