Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 0.0e+00 1855.5 928 100.0
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 4.6e-236 822.0 902 51.6
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 1.9e-234 816.6 848 54.2
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 8.7e-227 791.2 847 51.9
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 3.8e-214 749.2 862 48.6
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 7.1e-213 745.0 848 50.5
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 5.1e-211 738.8 862 48.3
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 1.3e-209 734.2 868 47.8
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 1.1e-208 731.1 852 48.0
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 2.4e-208 729.9 868 47.1
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 8.4e-206 721.5 848 48.5
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.6e-204 717.2 868 47.1
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 2.7e-204 716.5 838 49.2
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 1.4e-200 704.1 893 44.8
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 1.2e-199 701.0 863 46.2
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 3.2e-197 693.0 836 47.6
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 3.6e-196 689.5 855 46.0
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 4.6e-196 689.1 848 46.6
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 7.9e-196 688.3 848 47.3
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 1.2e-191 674.5 845 45.4
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 4.2e-189 666.0 842 45.4
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 7.2e-189 665.2 837 45.5
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 1.6e-188 664.1 842 45.0
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 1.8e-187 660.6 842 45.8
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 3.0e-187 659.8 863 45.0
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 3.9e-187 659.4 840 45.0
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 1.1e-186 657.9 847 45.8
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 4.4e-186 656.0 851 44.8
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 1.4e-184 651.0 863 44.1
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 1.4e-184 651.0 836 45.3
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 4.1e-184 649.4 848 45.6
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 2.0e-183 647.1 849 44.9
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 2.6e-183 646.7 862 44.3
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 3.5e-183 646.4 843 44.2
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 4.5e-183 646.0 845 44.3
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 7.7e-183 645.2 845 44.4
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 2.9e-182 643.3 845 44.4
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 2.9e-182 643.3 843 42.7
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 3.8e-182 642.9 860 45.1
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 5.0e-182 642.5 870 43.1
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 6.5e-182 642.1 845 44.1
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 3.2e-181 639.8 842 44.7
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 5.5e-181 639.0 880 44.3
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 6.7e-179 632.1 870 43.1
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 1.1e-178 631.3 853 43.6
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 7.4e-178 628.6 861 43.1
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 2.8e-177 626.7 843 43.5
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 8.2e-177 625.2 893 40.9
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 5.3e-176 622.5 838 43.9
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 9.1e-176 621.7 842 43.1
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 2.6e-175 620.2 840 43.3
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 3.5e-175 619.8 842 43.0
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 7.7e-175 618.6 871 43.1
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 6.5e-174 615.5 847 43.4
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 7.2e-173 612.1 843 42.8
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 9.4e-173 611.7 906 42.7
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 1.2e-172 611.3 839 42.6
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 1.6e-172 610.9 840 43.2
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 3.6e-172 609.8 846 43.3
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 6.1e-172 609.0 848 44.3
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 1.2e-170 604.7 834 42.6
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 9.7e-170 601.7 843 43.1
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 1.3e-169 601.3 834 42.4
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 1.3e-169 601.3 834 42.4
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 1.8e-168 597.4 847 41.7
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 1.7e-166 590.9 826 42.7
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 7.2e-165 585.5 849 42.6
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 2.3e-163 580.5 880 41.0
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 2.2e-161 573.9 812 42.4
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 4.8e-161 572.8 826 41.6
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 8.3e-161 572.0 840 39.4
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 3.1e-160 570.1 842 40.3
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 1.2e-159 568.2 881 41.0
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 1.2e-159 568.2 848 40.7
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 4.5e-159 566.2 787 42.6
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 5.9e-159 565.8 860 40.3
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 7.7e-159 565.5 850 40.4
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 1.3e-158 564.7 851 40.1
Hma1.2p1_1100F.1_g257040 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 2.3e-155 553.9 731 44.3
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 4.9e-153 546.2 839 39.9
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 2.0e-151 540.8 842 39.5
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 1.4e-144 518.1 849 37.8
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 1.6e-143 514.6 691 44.3
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 3.5e-143 513.5 844 38.9
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 1.0e-142 511.9 841 38.2
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 1.3e-142 511.5 846 39.6
BcaC08g47270 Brassica carinata HOM05D005833 ORTHO05D008135 8.0e-140 502.3 716 42.3
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 5.4e-136 489.6 711 41.9
AT1G76280 Arabidopsis thaliana HOM05D005833 ORTHO05D008135 2.9e-129 467.2 678 41.4
Gohir.D01G092700 Gossypium hirsutum HOM05D005833 ORTHO05D008135 8.3e-129 465.7 643 42.0
Sed0015348 Sechium edule HOM05D005833 ORTHO05D008135 3.5e-127 460.3 681 39.9
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 6.0e-127 459.5 710 38.9
DCAR_009531 Daucus carota HOM05D004428 ORTHO05D006381 5.8e-122 443.0 679 38.0
SalBow6G3625 Salvia bowleyana HOM05D005833 ORTHO05D008135 1.4e-104 385.2 620 37.4
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 3.2e-104 384.0 477 43.8
AUR62036881 Chenopodium quinoa HOM05D005833 ORTHO05D008135 2.6e-98 364.4 613 39.0
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 7.6e-98 362.8 351 53.3
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 1.0e-89 335.9 717 35.6
BcaC08g47127 Brassica carinata HOM05D005833 ORTHO05D008135 4.6e-79 300.4 528 36.7
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 5.3e-67 260.4 249 54.6
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 5.5e-64 250.4 374 40.9
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 5.9e-50 203.8 337 38.0
SMO230G0024 Selaginella moellendorffii HOM05D005833 ORTHO05D008135 1.3e-49 202.6 814 23.2
CBR_g11913 Chara braunii HOM05D005833 ORTHO05D008135 1.8e-46 192.2 650 25.7
TPR.G8631 Trifolium pratense HOM05D005833 ORTHO05D008135 3.7e-44 184.5 396 33.1
Glyma.14G222150 Glycine max HOM05D005833 ORTHO05D008135 3.3e-40 171.4 201 45.8
AagrBONN_evm.TU.Sc2ySwM_117.1478 Anthoceros agrestis HOM05D005833 ORTHO05D008135 4.7e-39 167.5 536 25.0
Lj8P589T22 Lonicera japonica HOM05D005833 ORTHO05D008135 4.7e-39 167.5 170 50.6
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 4.7e-39 167.5 164 56.7
Pp3c11_2930 Physcomitrium patens HOM05D005833 ORTHO05D008135 2.2e-36 158.7 809 23.2
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 2.4e-35 155.2 164 49.4
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 2.0e-34 152.1 140 57.1
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 2.0e-34 152.1 140 57.1
Mapoly0009s0070 Marchantia polymorpha HOM05D005833 ORTHO05D008135 3.9e-33 147.9 639 23.6
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 1.3e-25 122.9 115 53.0
Medtr1g026340 Medicago truncatula HOM05D005833 ORTHO05D008135 2.5e-24 118.6 145 46.2
Medtr1g026460 Medicago truncatula HOM05D005833 ORTHO05D008135 2.5e-24 118.6 145 46.2
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 9.5e-24 116.7 114 50.0
BcaC09g51225 Brassica carinata HOM05D005833 ORTHO05D008135 2.6e-13 82.0 76 53.9
BcaB05g24986 Brassica carinata HOM05D005833 ORTHO05D008135 2.9e-12 78.6 78 48.7
Lj5g0006874 Lotus japonicus HOM05D005833 ORTHO05D008135 1.9e-11 75.9 86 45.3
TPR.G8633 Trifolium pratense HOM05D005833 ORTHO05D008135 2.7e-10 72.0 100 42.0
CAN.G772.6 Capsicum annuum HOM05D005833 ORTHO05D008135 8.6e-09 67.0 74 50.0
PSO435G0001 Papaver somniferum HOM05D000001 ORTHO05D016553 3.3e-08 65.1 294 23.8
PSO596G0054 Papaver somniferum HOM05D000001 ORTHO05D016553 3.3e-08 65.1 294 23.8
PSO596G0065 Papaver somniferum HOM05D000001 ORTHO05D016553 3.3e-08 65.1 294 23.8
AagrBONN_evm.TU.Sc2ySwM_368.2709 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.6e-07 62.8 408 20.6
HanXRQChr16g0531501 Helianthus annuus HOM05D000001 ORTHO05D000003 1.4e-06 59.7 283 21.2
vmacro21815 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 1.4e-06 59.7 77 45.5
AagrBONN_evm.TU.Sc2ySwM_368.2635 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.4e-06 58.9 186 26.3
Eucgr.K03209 Eucalyptus grandis HOM05D000855 ORTHO05D008530 3.1e-06 58.5 405 20.0
PSO210G0619 Papaver somniferum HOM05D000001 ORTHO05D000003 3.1e-06 58.5 397 19.6


User provided reference genes

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