Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0684G104 Amborella trichopoda HOM05D001204 ORTHO05D001428 1.1e-34 149.4 74 100.0
ATR0654G001 Amborella trichopoda HOM05D001204 ORTHO05D001428 1.0e-13 79.7 40 95.0
ATR0654G005 Amborella trichopoda HOM05D001204 ORTHO05D001428 3.9e-13 77.8 57 71.9
ATR0684G126 Amborella trichopoda HOM05D001204 ORTHO05D001428 3.9e-13 77.8 40 92.5
ATR1082G001 Amborella trichopoda HOM05D001204 ORTHO05D001428 1.5e-12 75.9 42 90.5
ATR0665G631 Amborella trichopoda HOM05D001204 ORTHO05D001428 6.2e-11 70.5 40 82.5
ATR0654G006 Amborella trichopoda HOM05D001204 ORTHO05D001428 2.6e-09 65.1 40 82.5
ATR0829G011 Amborella trichopoda HOM05D001204 ORTHO05D001428 2.2e-08 62.0 40 75.0
Aa31LG10G1030 Aethionema arabicum HOM05D001204 ORTHO05D001428 1.4e-07 59.3 63 52.4
GSVIVG01025413001 Vitis vinifera HOM05D001204 ORTHO05D001428 1.4e-07 59.3 62 50.0
Solyc01g005985.1 Solanum lycopersicum HOM05D001204 ORTHO05D001428 1.9e-07 58.9 68 45.6
Sopen01g002000 Solanum pennellii HOM05D001204 ORTHO05D001428 1.9e-07 58.9 68 45.6
Dinv13432 Davidia involucrata HOM05D001204 ORTHO05D001428 2.5e-07 58.5 41 65.9
Nitab4.5_0000775g0090 Nicotiana tabacum HOM05D001204 ORTHO05D001428 2.5e-07 58.5 57 49.1
ATR0681G111 Amborella trichopoda HOM05D001204 ORTHO05D001428 3.2e-07 58.2 40 75.0
CAN.G158.7 Capsicum annuum HOM05D001204 ORTHO05D001428 3.2e-07 58.2 66 47.0
Nn7g35928 Nelumbo nucifera HOM05D001204 ORTHO05D001428 4.2e-07 57.8 62 48.4
MELO3C015638.2 Cucumis melo HOM05D001204 ORTHO05D001428 7.1e-07 57.0 40 65.0
CsaV3_1G042180 Cucumis sativus L. HOM05D001204 ORTHO05D001428 7.1e-07 57.0 40 65.0
Nitab4.5_0001059g0030 Nicotiana tabacum HOM05D001204 ORTHO05D001428 7.1e-07 57.0 61 47.5
Peaxi162Scf00100g00081 Petunia axillaris HOM05D001204 ORTHO05D001428 7.1e-07 57.0 62 46.8
THA.LOC104815658 Tarenaya hassleriana HOM05D001204 ORTHO05D001428 7.1e-07 57.0 67 47.8
CiPaw.14G134000 Carya illinoinensis HOM05D001204 ORTHO05D001428 9.3e-07 56.6 62 48.4
ClCG03G014040 Citrullus lanatus HOM05D001204 ORTHO05D001428 9.3e-07 56.6 40 65.0
Sed0023138 Sechium edule HOM05D001204 ORTHO05D001428 9.3e-07 56.6 40 57.5
TWI60G1209 Tripterygium wilfordii HOM05D001204 ORTHO05D001428 9.3e-07 56.6 56 57.1
Cfa010703 Carpinus fangiana HOM05D001204 ORTHO05D001428 1.2e-06 56.2 40 57.5
Nn2g15782 Nelumbo nucifera HOM05D001204 ORTHO05D001428 1.2e-06 56.2 56 51.8
QL01p008012 Quercus lobata HOM05D001204 ORTHO05D001428 1.2e-06 56.2 62 48.4
PGSC0003DMG400032182 Solanum tuberosum HOM05D001204 ORTHO05D001428 1.2e-06 56.2 64 48.4
TAR369G0318 Trochodendron aralioides HOM05D001204 ORTHO05D001428 1.2e-06 56.2 62 46.8
TAR627G0349 Trochodendron aralioides HOM05D001204 ORTHO05D001428 1.2e-06 56.2 65 49.2
TAR633G0401 Trochodendron aralioides HOM05D001204 ORTHO05D001428 1.2e-06 56.2 67 49.3
TAR633G1632 Trochodendron aralioides HOM05D001204 ORTHO05D001428 1.2e-06 56.2 67 49.3
Atru.chr3.2271 Acer truncatum HOM05D001204 ORTHO05D001428 1.6e-06 55.8 56 55.4
Actinidia16264 Actinidia chinensis HOM05D001204 ORTHO05D001428 1.6e-06 55.8 62 46.8
Aqoxy1G00069 Aquilegia oxysepala HOM05D001204 ORTHO05D001428 1.6e-06 55.8 56 51.8
Haze_22982 Corylus avellana HOM05D001204 ORTHO05D001428 1.6e-06 55.8 40 67.5
Gohir.A06G102700 Gossypium hirsutum HOM05D001204 ORTHO05D001428 1.6e-06 55.8 56 53.6
Gohir.D06G111700 Gossypium hirsutum HOM05D001204 ORTHO05D001428 1.6e-06 55.8 56 53.6
Gorai.010G127100 Gossypium raimondii HOM05D001204 ORTHO05D001428 1.6e-06 55.8 56 53.6
Sed0015787 Sechium edule HOM05D001204 ORTHO05D001428 1.6e-06 55.8 41 63.4
ClCG02G023920 Citrullus lanatus HOM05D001204 ORTHO05D001428 2.1e-06 55.5 62 48.4
Gohir.D08G089200 Gossypium hirsutum HOM05D001204 ORTHO05D001428 2.1e-06 55.5 41 63.4
TWI60G0572 Tripterygium wilfordii HOM05D001204 ORTHO05D001428 2.1e-06 55.5 40 62.5
GSVIVG01001350001 Vitis vinifera HOM05D001204 ORTHO05D001428 2.1e-06 55.5 40 60.0
EL10Ac4g10353 Beta vulgaris HOM05D001204 ORTHO05D001428 2.7e-06 55.1 41 61.0
CARHR044910 Cardamine hirsuta HOM05D001204 ORTHO05D001428 2.7e-06 55.1 63 47.6
CsaV3_4G023430 Cucumis sativus L. HOM05D001204 ORTHO05D001428 2.7e-06 55.1 41 63.4
Duzib168G0453 Durio zibethinus HOM05D001204 ORTHO05D001428 2.7e-06 55.1 56 53.6
MBI01_g44283_MAGBIO Magnolia biondii HOM05D001204 ORTHO05D001428 2.7e-06 55.1 69 50.7
Phvul.002G234400 Phaseolus vulgaris HOM05D001204 ORTHO05D001428 2.7e-06 55.1 62 43.5
Sabra03G0162100 Salix brachista HOM05D001204 ORTHO05D001428 2.7e-06 55.1 61 45.9
CiPaw.13G000500 Carya illinoinensis HOM05D001204 ORTHO05D001428 3.5e-06 54.7 40 57.5
Gohir.A08G079600 Gossypium hirsutum HOM05D001204 ORTHO05D001428 3.5e-06 54.7 41 63.4
Os03g0167000 Oryza sativa ssp. japonica HOM05D001204 ORTHO05D001428 3.5e-06 54.7 56 51.8
PGR031G2307 Punica granatum HOM05D001204 ORTHO05D001428 3.5e-06 54.7 62 43.5
PGR102G2431 Punica granatum HOM05D001204 ORTHO05D001428 3.5e-06 54.7 40 62.5
THA.LOC104810336 Tarenaya hassleriana HOM05D001204 ORTHO05D001428 3.5e-06 54.7 64 43.8
VMungo0251G0950 Vigna mungo HOM05D001204 ORTHO05D001428 3.5e-06 54.7 41 58.5
AT1G55260 Arabidopsis thaliana HOM05D001204 ORTHO05D001428 4.6e-06 54.3 61 47.5
A08p00770 Brassica napus HOM05D001204 ORTHO05D001428 4.6e-06 54.3 65 46.2
C03p92560 Brassica napus HOM05D001204 ORTHO05D001428 4.6e-06 54.3 65 46.2
BolC3t21570H Brassica oleracea HOM05D001204 ORTHO05D001428 4.6e-06 54.3 65 46.2
BraA08t32134Z Brassica rapa HOM05D001204 ORTHO05D001428 4.6e-06 54.3 65 46.2
Cfa009610 Carpinus fangiana HOM05D001204 ORTHO05D001428 4.6e-06 54.3 73 45.2
CiPaw.13G174200 Carya illinoinensis HOM05D001204 ORTHO05D001428 4.6e-06 54.3 62 45.2
MELO3C014672.2 Cucumis melo HOM05D001204 ORTHO05D001428 4.6e-06 54.3 56 53.6
Duzib170G0323 Durio zibethinus HOM05D001204 ORTHO05D001428 4.6e-06 54.3 56 51.8
Ciclev10016842m.g Citrus clementina HOM05D001204 ORTHO05D001428 6.0e-06 53.9 62 43.5
Eucgr.B03624 Eucalyptus grandis HOM05D001204 ORTHO05D001428 6.0e-06 53.9 61 47.5
Lalb_Chr07g0186701 Lupinus albus HOM05D001204 ORTHO05D001428 6.0e-06 53.9 41 56.1
HPP92_009602 Vanilla planifolia HOM05D001204 ORTHO05D001428 6.0e-06 53.9 41 58.5
Zm00001eb005130 Zea mays HOM05D001204 ORTHO05D001428 6.0e-06 53.9 40 60.0
Carub.0001s4376 Capsella rubella HOM05D001204 ORTHO05D001428 7.9e-06 53.5 63 47.6
COL.COLO4_16508 Corchorus olitorius HOM05D001204 ORTHO05D001428 7.9e-06 53.5 62 43.5
Gohir.A05G000700 Gossypium hirsutum HOM05D001204 ORTHO05D001428 7.9e-06 53.5 41 58.5
Gohir.D05G001000 Gossypium hirsutum HOM05D001204 ORTHO05D001428 7.9e-06 53.5 66 43.9
Gorai.004G094000 Gossypium raimondii HOM05D001204 ORTHO05D001428 7.9e-06 53.5 41 61.0
Gorai.009G000900 Gossypium raimondii HOM05D001204 ORTHO05D001428 7.9e-06 53.5 66 43.9
Lsat_1_v5_gn_2_101621 Lactuca sativa HOM05D001204 ORTHO05D001428 7.9e-06 53.5 40 60.0
TAR623G0881 Trochodendron aralioides HOM05D001204 ORTHO05D001428 7.9e-06 53.5 56 51.8
GSVIVG01025408001 Vitis vinifera HOM05D001204 ORTHO05D001428 7.9e-06 53.5 56 51.8


User provided reference genes

Program Settings