Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G370 Amborella trichopoda HOM05D005300 ORTHO05D006622 1.4e-48 196.1 104 100.0
ATR0681G167 Amborella trichopoda HOM05D005300 ORTHO05D006622 1.9e-26 122.5 77 84.4
ATR0794G038 Amborella trichopoda HOM05D005300 ORTHO05D006622 1.9e-18 95.9 58 87.9
ATR0753G011 Amborella trichopoda HOM05D005300 ORTHO05D006622 1.2e-12 76.6 80 56.2
TWI36G1224 Tripterygium wilfordii HOM05D005300 ORTHO05D006622 1.2e-12 76.6 74 60.8
TAR624G0116 Trochodendron aralioides HOM05D005300 ORTHO05D006622 1.6e-12 76.3 75 60.0
HanXRQChr10g0295521 Helianthus annuus HOM05D005300 ORTHO05D006622 2.7e-12 75.5 58 65.5
Nn1g03500 Nelumbo nucifera HOM05D005300 ORTHO05D006622 4.6e-12 74.7 84 57.1
ATR0069G030 Amborella trichopoda HOM05D005300 ORTHO05D006622 1.4e-11 73.2 70 62.9
TWI18G0506 Tripterygium wilfordii HOM05D005300 ORTHO05D006622 1.4e-11 73.2 73 58.9
MSTRG.14149 Avicennia marina HOM05D005300 ORTHO05D006622 2.3e-11 72.4 74 59.5
Psat0s4267g0040 Pisum sativum HOM05D005300 ORTHO05D006622 2.3e-11 72.4 100 50.0
Cpa.g.sc87.86 Carica papaya HOM05D005300 ORTHO05D006622 3.9e-11 71.6 56 69.6
SGA_v2.0_scaffold159G37576 Striga asiatica HOM05D005300 ORTHO05D006622 3.9e-11 71.6 57 66.7
Actinidia08387 Actinidia chinensis HOM05D005300 ORTHO05D006622 5.1e-11 71.2 74 51.4
Ca_03278_v3 Cicer arietinum L. HOM05D005300 ORTHO05D006622 5.1e-11 71.2 93 49.5
arahy.Tifrunner.gnm1.ann1.B9TUKK Arachis hypogaea HOM05D005300 ORTHO05D006622 8.8e-11 70.5 81 56.8
TPR.G4668 Trifolium pratense HOM05D005300 ORTHO05D006622 8.8e-11 70.5 56 69.6
TAR626G0150 Trochodendron aralioides HOM05D005300 ORTHO05D006622 8.8e-11 70.5 73 57.5
Sabra14G0116500 Salix brachista HOM05D005300 ORTHO05D006622 1.1e-10 70.1 89 49.4
arahy.Tifrunner.gnm1.ann1.SJMT99 Arachis hypogaea HOM05D005300 ORTHO05D006622 1.5e-10 69.7 81 56.8
Lj3g0003317 Lotus japonicus HOM05D005300 ORTHO05D006622 1.5e-10 69.7 69 62.3
PGSC0003DMG400028948 Solanum tuberosum HOM05D005300 ORTHO05D006622 1.5e-10 69.7 81 56.8
CSS0027646 Camellia sinensis var. sinensis HOM05D005300 ORTHO05D006622 2.0e-10 69.3 57 59.6
Lsat_1_v5_gn_9_107520 Lactuca sativa HOM05D005300 ORTHO05D006622 2.0e-10 69.3 54 64.8
Lj1P766T34 Lonicera japonica HOM05D005300 ORTHO05D006622 2.0e-10 69.3 56 66.1
QL08p032961 Quercus lobata HOM05D005300 ORTHO05D006622 2.0e-10 69.3 79 54.4
CiPaw.04G115200 Carya illinoinensis HOM05D005300 ORTHO05D006622 2.5e-10 68.9 56 67.9
Glyma.06G306700 Glycine max HOM05D005300 ORTHO05D006622 2.5e-10 68.9 56 67.9
Phvul.011G103000 Phaseolus vulgaris HOM05D005300 ORTHO05D006622 2.5e-10 68.9 56 67.9
AUR62000009 Chenopodium quinoa HOM05D005300 ORTHO05D006622 3.3e-10 68.6 45 77.8
AUR62019178 Chenopodium quinoa HOM05D005300 ORTHO05D006622 3.3e-10 68.6 45 77.8
AUR62019179 Chenopodium quinoa HOM05D005300 ORTHO05D006622 3.3e-10 68.6 45 77.8
Lalb_Chr03g0028691 Lupinus albus HOM05D005300 ORTHO05D006622 3.3e-10 68.6 56 64.3
Oeu007114.1 Olea europaea HOM05D005300 ORTHO05D006622 3.3e-10 68.6 54 68.5
CAN.G1296.1 Capsicum annuum HOM05D005300 ORTHO05D006622 4.3e-10 68.2 95 46.3
Solyc07g052290.1 Solanum lycopersicum HOM05D005300 ORTHO05D006622 4.3e-10 68.2 87 51.7
Sopen07g025910 Solanum pennellii HOM05D005300 ORTHO05D006622 4.3e-10 68.2 80 55.0
EL10Ac4g10369 Beta vulgaris HOM05D005300 ORTHO05D006622 5.7e-10 67.8 50 72.0
Glyma.12G098200 Glycine max HOM05D005300 ORTHO05D006622 5.7e-10 67.8 95 47.4
Potri.014G154000 Populus trichocarpa HOM05D005300 ORTHO05D006622 5.7e-10 67.8 89 49.4
Prupe.3G216500 Prunus persica HOM05D005300 ORTHO05D006622 5.7e-10 67.8 87 49.4
Potri.002G228600 Populus trichocarpa HOM05D005300 ORTHO05D006622 7.4e-10 67.4 89 48.3
Sp1g03990 Schrenkiella parvula HOM05D005300 ORTHO05D006622 7.4e-10 67.4 56 66.1
SpUn0024_0150 Schrenkiella parvula HOM05D005300 ORTHO05D006622 7.4e-10 67.4 56 66.1
FvH4_6g43160 Fragaria vesca HOM05D005300 ORTHO05D006622 9.7e-10 67.0 55 67.3
FAN05G3018 Fragaria x ananassa HOM05D005300 ORTHO05D006622 9.7e-10 67.0 55 67.3
CiPaw.03G159400 Carya illinoinensis HOM05D005300 ORTHO05D006622 1.3e-09 66.6 88 51.1
Ciclev10015229m.g Citrus clementina HOM05D005300 ORTHO05D006622 1.3e-09 66.6 83 51.8
PSO541G4463 Papaver somniferum HOM05D005300 ORTHO05D006622 1.3e-09 66.6 73 58.9
BcaC02g11315 Brassica carinata HOM05D005300 ORTHO05D006622 2.2e-09 65.9 55 69.1
C04p17170 Brassica napus HOM05D005300 ORTHO05D006622 2.2e-09 65.9 55 69.1
BolC4t23267H Brassica oleracea HOM05D005300 ORTHO05D006622 2.2e-09 65.9 55 69.1
PSO675G7879 Papaver somniferum HOM05D005300 ORTHO05D006622 2.2e-09 65.9 58 65.5
A05p13230 Brassica napus HOM05D005300 ORTHO05D006622 2.8e-09 65.5 55 67.3
BraA05t20264Z Brassica rapa HOM05D005300 ORTHO05D006622 2.8e-09 65.5 55 67.3
AL4G27860 Arabidopsis lyrata HOM05D005300 ORTHO05D006622 3.7e-09 65.1 56 66.1
AT2G32480 Arabidopsis thaliana HOM05D005300 ORTHO05D006622 3.7e-09 65.1 56 66.1
CARHR126300 Cardamine hirsuta HOM05D005300 ORTHO05D006622 3.7e-09 65.1 56 66.1
Manes.12G074100 Manihot esculenta HOM05D005300 ORTHO05D006622 3.7e-09 65.1 104 48.1
Medtr4g048590 Medicago truncatula HOM05D005300 ORTHO05D006622 3.7e-09 65.1 102 46.1
RcHm_v2.0_Chr2g0159081 Rosa chinensis HOM05D005300 ORTHO05D006622 3.7e-09 65.1 54 64.8
SalBow1G7639 Salvia bowleyana HOM05D005300 ORTHO05D006622 3.7e-09 65.1 70 55.7
BcaB02g10466 Brassica carinata HOM05D005300 ORTHO05D006622 4.8e-09 64.7 54 66.7
CANSAT64G1405 Cannabis sativa HOM05D005300 ORTHO05D006622 6.3e-09 64.3 73 54.8
Carub.0004s1382 Capsella rubella HOM05D005300 ORTHO05D006622 6.3e-09 64.3 54 68.5
Migut.H01227 Erythranthe guttata HOM05D005300 ORTHO05D006622 6.3e-09 64.3 41 80.5
Peaxi162Scf00007g00072 Petunia axillaris HOM05D005300 ORTHO05D006622 6.3e-09 64.3 69 53.6
Atru.chr6.3194 Acer truncatum HOM05D005300 ORTHO05D006622 8.2e-09 63.9 73 52.1
FAN02G3120 Fragaria x ananassa HOM05D005300 ORTHO05D006622 8.2e-09 63.9 51 68.6
THA.LOC104826148 Tarenaya hassleriana HOM05D005300 ORTHO05D006622 1.1e-08 63.5 56 64.3
BolC5t29115H Brassica oleracea HOM05D005300 ORTHO05D006622 1.4e-08 63.2 83 49.4
Thhalv10017977m.g Eutrema salsugineum HOM05D005300 ORTHO05D006622 1.4e-08 63.2 56 64.3
CSS0024072 Camellia sinensis var. sinensis HOM05D005300 ORTHO05D006622 1.8e-08 62.8 46 69.6
MELO3C019273.2 Cucumis melo HOM05D005300 ORTHO05D006622 1.8e-08 62.8 81 50.6
FAN09G2150 Fragaria x ananassa HOM05D005300 ORTHO05D006622 1.8e-08 62.8 51 66.7
Aqoxy1G02098 Aquilegia oxysepala HOM05D005300 ORTHO05D006622 2.4e-08 62.4 73 53.4
Cc05_g04360 Coffea canephora HOM05D005300 ORTHO05D006622 2.4e-08 62.4 69 53.6
Aa31LG1G19610 Aethionema arabicum HOM05D005300 ORTHO05D006622 3.1e-08 62.0 56 62.5
COL.COLO4_11250 Corchorus olitorius HOM05D005300 ORTHO05D006622 3.1e-08 62.0 56 62.5
PGR042G1729 Punica granatum HOM05D005300 ORTHO05D006622 3.1e-08 62.0 61 59.0
Sp4g14840 Schrenkiella parvula HOM05D005300 ORTHO05D006622 3.1e-08 62.0 54 64.8
ClCG02G008830 Citrullus lanatus HOM05D005300 ORTHO05D006622 4.1e-08 61.6 58 62.1
ECA240G1660 Erigeron canadensis HOM05D005300 ORTHO05D006622 4.1e-08 61.6 51 60.8
Sabra02G0174700 Salix brachista HOM05D005300 ORTHO05D006622 4.1e-08 61.6 89 44.9
A10p03670 Brassica napus HOM05D005300 ORTHO05D006622 5.3e-08 61.2 93 46.2
BraA10t42640Z Brassica rapa HOM05D005300 ORTHO05D006622 5.3e-08 61.2 93 46.2
CARHR004610 Cardamine hirsuta HOM05D005300 ORTHO05D006622 5.3e-08 61.2 54 66.7
Sed0016669 Sechium edule HOM05D005300 ORTHO05D006622 5.3e-08 61.2 100 46.0
Thecc.02G365500 Theobroma cacao HOM05D005300 ORTHO05D006622 5.3e-08 61.2 56 64.3
Eucgr.A01121 Eucalyptus grandis HOM05D005300 ORTHO05D006622 6.9e-08 60.8 56 62.5
AL1G14900 Arabidopsis lyrata HOM05D005300 ORTHO05D006622 9.1e-08 60.5 54 64.8
Duzib251G0812 Durio zibethinus HOM05D005300 ORTHO05D006622 1.2e-07 60.1 56 62.5
Gohir.A12G174000 Gossypium hirsutum HOM05D005300 ORTHO05D006622 2.6e-07 58.9 56 60.7
Gorai.008G189100 Gossypium raimondii HOM05D005300 ORTHO05D006622 2.6e-07 58.9 56 60.7
MD09G1110000 Malus domestica HOM05D005300 ORTHO05D006622 2.6e-07 58.9 36 83.3
SEGI_01159 Sequoiadendron giganteum HOM05D005300 ORTHO05D006622 2.6e-07 58.9 43 69.8
Carub.0001s0441 Capsella rubella HOM05D005300 ORTHO05D006622 3.4e-07 58.5 53 64.2
Sc21g0001390 Simmondsia chinensis HOM05D005300 ORTHO05D006622 3.4e-07 58.5 36 83.3
Gohir.D12G176700 Gossypium hirsutum HOM05D005300 ORTHO05D006622 7.7e-07 57.4 56 58.9
Rhsim04G0052800 Rhododendron simsii HOM05D005300 ORTHO05D006622 7.7e-07 57.4 35 80.0
SMO351G0125 Selaginella moellendorffii HOM05D005300 ORTHO05D006622 7.7e-07 57.4 53 54.7
Mapoly0064s0026 Marchantia polymorpha HOM05D005300 ORTHO05D006622 1.0e-06 57.0 43 67.4
AT1G05140 Arabidopsis thaliana HOM05D005300 ORTHO05D006622 1.7e-06 56.2 54 61.1
Pp3c19_19130 Physcomitrium patens HOM05D005300 ORTHO05D006622 1.7e-06 56.2 47 66.0
CBR_g50915 Chara braunii HOM05D005300 ORTHO05D006622 5.0e-06 54.7 43 67.4


User provided reference genes

Program Settings