Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 2.9e-88 329.3 285 100.0
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 2.0e-28 130.6 294 58.5
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 3.5e-25 119.8 288 52.8
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.0e-24 118.2 289 64.4
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.1e-23 114.8 293 61.1
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 3.2e-23 113.2 290 58.3
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 9.4e-23 111.7 287 57.1
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.2e-22 111.3 289 57.4
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 2.1e-22 110.5 290 57.2
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.4e-21 107.8 288 60.8
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 1.8e-21 107.5 286 61.9
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 2.3e-21 107.1 292 54.8
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.0e-21 106.7 289 49.8
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 3.0e-21 106.7 295 51.5
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 5.2e-21 105.9 287 58.2
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.7e-21 105.5 289 49.8
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.7e-21 105.5 288 53.8
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 2.0e-20 104.0 260 64.6
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 2.0e-20 104.0 290 56.6
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 2.6e-20 103.6 290 51.0
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 4.4e-20 102.8 290 56.9
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.3e-19 101.3 257 52.1
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 2.2e-19 100.5 292 57.2
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 4.8e-19 99.4 296 59.5
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 6.3e-19 99.0 292 59.2
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 8.2e-19 98.6 106 58.5
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 8.2e-19 98.6 106 58.5
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 1.1e-18 98.2 286 52.1
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.4e-18 97.8 290 56.9
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.8e-18 97.4 159 67.3
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.8e-18 97.4 288 56.9
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 2.4e-18 97.1 290 54.8
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 3.1e-18 96.7 106 67.0
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 3.1e-18 96.7 254 65.4
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 4.1e-18 96.3 287 54.4
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 4.1e-18 96.3 277 50.2
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 5.3e-18 95.9 247 61.1
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 5.3e-18 95.9 290 57.6
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.0e-18 95.5 287 52.6
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 7.0e-18 95.5 272 52.6
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 7.0e-18 95.5 272 51.1
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 7.0e-18 95.5 311 46.3
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 2.0e-17 94.0 292 55.1
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 2.6e-17 93.6 294 56.1
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 2.6e-17 93.6 290 57.6
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 3.5e-17 93.2 293 47.1
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 5.9e-17 92.4 159 62.9
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 7.7e-17 92.0 288 54.5
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.0e-16 91.7 105 61.9
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 1.0e-16 91.7 158 62.7
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 1.0e-16 91.7 158 59.5
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 1.3e-16 91.3 162 46.9
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 2.2e-16 90.5 107 47.7
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 2.2e-16 90.5 108 52.8
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 2.2e-16 90.5 158 58.9
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 2.2e-16 90.5 291 39.9
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 3.8e-16 89.7 289 55.0
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 3.8e-16 89.7 286 58.7
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 6.5e-16 89.0 286 51.0
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 6.5e-16 89.0 286 53.5
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 6.5e-16 89.0 106 52.8
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 8.5e-16 88.6 106 47.2
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 1.1e-15 88.2 106 52.8
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.1e-15 88.2 290 55.5
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 1.5e-15 87.8 103 52.4
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 1.5e-15 87.8 103 52.4
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 1.5e-15 87.8 291 52.2
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 1.5e-15 87.8 256 55.1
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 1.5e-15 87.8 106 62.3
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 1.5e-15 87.8 106 47.2
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.5e-15 87.8 157 61.8
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 1.9e-15 87.4 286 53.8
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.5e-15 87.0 106 47.2
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 2.5e-15 87.0 158 57.6
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 3.2e-15 86.7 106 50.9
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 3.2e-15 86.7 314 56.4
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 3.2e-15 86.7 291 55.3
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 4.2e-15 86.3 292 52.4
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 5.5e-15 85.9 302 46.4
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 5.5e-15 85.9 254 42.5
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 7.2e-15 85.5 106 56.6
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 9.4e-15 85.1 108 49.1
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.2e-14 84.7 289 56.4
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 2.1e-14 84.0 287 51.2
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 2.1e-14 84.0 106 58.5
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 2.7e-14 83.6 106 50.0
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 3.6e-14 83.2 106 45.3
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 4.7e-14 82.8 242 62.0
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 6.1e-14 82.4 294 54.4
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 6.1e-14 82.4 288 52.8
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 8.0e-14 82.0 105 51.4
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 8.0e-14 82.0 105 51.4
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.0e-13 81.6 290 52.8
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 4.0e-13 79.7 106 48.1
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 6.8e-13 79.0 106 48.1
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 2.0e-12 77.4 284 46.5
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 2.6e-12 77.0 290 49.0
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 3.4e-12 76.6 107 49.5
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 4.4e-12 76.3 289 52.2
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 2.2e-11 73.9 110 70.0
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.8e-10 70.9 207 52.7
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 3.1e-10 70.1 106 51.9
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 3.5e-09 66.6 56 58.9
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 1.5e-07 61.2 38 65.8
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 3.6e-06 56.6 28 78.6


User provided reference genes

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