Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 5.2e-114 414.5 217 100.0
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 1.8e-34 150.2 185 50.3
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 9.0e-34 147.9 208 44.7
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.4e-31 140.6 184 46.2
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.9e-31 140.2 184 46.7
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 3.5e-30 136.0 203 42.4
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 3.5e-30 136.0 206 40.8
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.0e-29 134.4 205 41.0
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 1.0e-29 134.4 180 43.9
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 3.9e-29 132.5 204 39.7
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 3.9e-29 132.5 202 40.1
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 5.1e-29 132.1 180 43.3
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 1.1e-28 131.0 198 41.4
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 3.3e-28 129.4 181 47.5
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 3.3e-28 129.4 205 40.5
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 4.3e-28 129.0 198 40.9
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 4.3e-28 129.0 179 45.3
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 4.3e-28 129.0 205 40.5
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 9.6e-28 127.9 180 44.4
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 4.8e-27 125.6 183 41.5
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 1.1e-26 124.4 182 40.7
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 1.1e-26 124.4 185 42.2
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 1.1e-26 124.4 206 41.3
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 1.4e-26 124.0 212 37.7
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 2.4e-26 123.2 173 43.9
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 5.3e-26 122.1 204 38.2
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 6.9e-26 121.7 201 40.3
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 6.9e-26 121.7 224 38.8
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 9.0e-26 121.3 199 40.7
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 9.0e-26 121.3 204 38.2
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.2e-25 120.9 181 43.6
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 1.2e-25 120.9 187 41.2
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.0e-25 120.2 198 37.4
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 2.0e-25 120.2 186 41.4
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 2.0e-25 120.2 183 38.3
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 2.6e-25 119.8 182 40.7
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 2.6e-25 119.8 187 40.6
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 2.6e-25 119.8 185 41.1
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 4.5e-25 119.0 186 41.9
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 5.9e-25 118.6 184 41.3
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 7.6e-25 118.2 181 42.0
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 1.0e-24 117.9 182 40.1
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 1.3e-24 117.5 189 39.7
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.3e-24 117.5 195 39.0
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 1.3e-24 117.5 215 35.3
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.3e-24 117.5 198 40.4
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 1.7e-24 117.1 182 40.1
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 1.7e-24 117.1 161 43.5
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 2.2e-24 116.7 198 38.9
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 2.2e-24 116.7 198 39.4
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 2.2e-24 116.7 198 38.9
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 2.2e-24 116.7 198 38.9
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 2.2e-24 116.7 206 38.3
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.9e-24 116.3 195 39.0
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 5.0e-24 115.5 182 39.0
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 8.5e-24 114.8 184 39.1
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.9e-23 113.6 174 39.7
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 2.5e-23 113.2 179 38.5
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 2.5e-23 113.2 163 44.8
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 4.2e-23 112.5 203 36.0
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 9.3e-23 111.3 195 37.9
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 1.6e-22 110.5 165 41.2
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 1.6e-22 110.5 174 36.8
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 1.6e-22 110.5 186 37.1
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 2.7e-22 109.8 185 37.3
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 3.6e-22 109.4 198 36.9
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 6.1e-22 108.6 199 38.7
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 7.9e-22 108.2 160 43.8
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 1.3e-21 107.5 167 39.5
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 1.3e-21 107.5 183 38.8
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 1.8e-21 107.1 183 36.6
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 2.3e-21 106.7 181 38.7
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 5.1e-21 105.5 181 38.7
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 5.1e-21 105.5 200 37.5
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 6.7e-21 105.1 175 40.6
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 1.1e-20 104.4 149 47.0
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.1e-20 104.4 196 34.2
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 7.4e-20 101.7 162 38.9
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 1.3e-19 100.9 185 37.3
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 1.3e-19 100.9 184 37.5
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 2.2e-19 100.1 183 36.6
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 2.8e-19 99.8 186 38.7
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.8e-19 99.8 212 34.0
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 3.7e-19 99.4 204 34.3
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 1.4e-18 97.4 161 38.5
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 2.4e-18 96.7 194 35.1
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 3.1e-18 96.3 200 34.0
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.1e-18 95.9 180 38.9
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 4.1e-18 95.9 180 38.9
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.6e-17 93.2 180 38.3
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 3.4e-17 92.8 177 36.7
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 8.5e-16 88.2 189 34.4
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 1.4e-15 87.4 167 38.3
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.9e-15 87.0 180 31.7
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.1e-14 83.6 180 36.1
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 2.7e-14 83.2 122 45.1
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 4.6e-14 82.4 137 37.2
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 4.6e-14 82.4 183 35.0
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 6.1e-14 82.0 164 37.8
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.8e-13 80.5 170 34.1
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 3.0e-13 79.7 109 45.9
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 4.4e-12 75.9 174 33.3
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 9.7e-12 74.7 98 40.8
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 6.9e-10 68.6 112 42.0
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 9.1e-10 68.2 167 32.9
Sp6g18670 Schrenkiella parvula HOM05D004059 ORTHO05D004591 8.5e-08 61.6 100 36.0
unitig_749.g14229 Utricularia gibba HOM05D004059 ORTHO05D004591 4.2e-07 59.3 99 39.4
Carub.0008s1744 Capsella rubella HOM05D004059 ORTHO05D004591 9.4e-07 58.2 94 36.2
MD15G1208900 Malus domestica HOM05D004059 ORTHO05D004591 9.4e-07 58.2 121 36.4
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 9.4e-07 58.2 180 27.2
AT5G56960 Arabidopsis thaliana HOM05D004059 ORTHO05D004591 1.2e-06 57.8 85 36.5
AL8G32820 Arabidopsis lyrata HOM05D004059 ORTHO05D004591 1.6e-06 57.4 93 38.7
TAR624G0558 Trochodendron aralioides HOM05D004059 ORTHO05D004591 1.6e-06 57.4 166 32.5
Cc06_g11520 Coffea canephora HOM05D004059 ORTHO05D004591 2.1e-06 57.0 106 37.7
THA.LOC104811746 Tarenaya hassleriana HOM05D004059 ORTHO05D004591 2.1e-06 57.0 122 32.8
Aqoxy7G04020 Aquilegia oxysepala HOM05D004059 ORTHO05D004591 2.7e-06 56.6 121 38.8
MD02G1081600 Malus domestica HOM05D004059 ORTHO05D004591 2.7e-06 56.6 122 35.2
Dinv36776 Davidia involucrata HOM05D004059 ORTHO05D004591 3.6e-06 56.2 142 33.8
BcaC03g14194 Brassica carinata HOM05D004059 ORTHO05D004591 4.7e-06 55.8 97 36.1
C02p14760 Brassica napus HOM05D004059 ORTHO05D004591 4.7e-06 55.8 97 36.1
BolC2t07605H Brassica oleracea HOM05D004059 ORTHO05D004591 4.7e-06 55.8 97 36.1
Hma1.2p1_1838F.1_g304870 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 6.1e-06 55.5 110 32.7
A02p08850 Brassica napus HOM05D004059 ORTHO05D004591 7.9e-06 55.1 97 35.1
CARHR270700 Cardamine hirsuta HOM05D004059 ORTHO05D004591 7.9e-06 55.1 106 34.0


User provided reference genes

Program Settings