Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 7.4e-192 673.7 338 100.0
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 7.2e-171 604.0 333 89.5
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 9.3e-171 603.6 333 89.5
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 9.3e-171 603.6 333 89.5
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 9.3e-171 603.6 333 89.5
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 2.7e-170 602.1 333 89.5
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 1.8e-169 599.4 333 88.0
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 6.7e-169 597.4 339 87.3
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 1.5e-168 596.3 333 88.0
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 3.3e-168 595.1 333 88.6
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 4.3e-168 594.7 333 88.0
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 5.7e-168 594.3 339 86.7
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 5.7e-168 594.3 339 86.7
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 7.4e-168 594.0 338 87.6
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 7.4e-168 594.0 339 85.8
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 1.3e-167 593.2 339 86.1
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 2.2e-167 592.4 333 88.0
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 2.8e-167 592.0 338 86.7
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 3.7e-167 591.7 337 86.4
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 6.3e-167 590.9 339 86.4
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 6.3e-167 590.9 339 85.5
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 6.3e-167 590.9 330 87.9
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 1.1e-166 590.1 333 87.4
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 1.1e-166 590.1 333 86.8
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 1.4e-166 589.7 339 86.4
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 2.4e-166 589.0 339 85.0
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 4.1e-166 588.2 339 84.1
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 4.1e-166 588.2 333 87.7
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 5.3e-166 587.8 339 85.5
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 6.9e-166 587.4 333 86.8
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 9.0e-166 587.0 333 86.5
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 1.2e-165 586.6 333 86.5
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 1.5e-165 586.3 333 86.5
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 2.0e-165 585.9 333 86.8
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 2.0e-165 585.9 339 84.7
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.6e-165 585.5 333 86.2
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 2.6e-165 585.5 333 86.8
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 3.4e-165 585.1 333 86.5
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 4.5e-165 584.7 333 86.5
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 4.5e-165 584.7 330 87.3
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 4.5e-165 584.7 339 84.4
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 7.7e-165 583.9 339 84.4
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 7.7e-165 583.9 333 86.2
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 1.0e-164 583.6 336 86.0
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 1.7e-164 582.8 339 83.8
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 2.9e-164 582.0 376 79.0
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 5.0e-164 581.3 330 86.7
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 6.5e-164 580.9 341 84.2
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 6.5e-164 580.9 336 85.1
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 1.1e-163 580.1 338 83.7
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 1.1e-163 580.1 333 86.2
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 1.4e-163 579.7 333 84.7
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.9e-163 579.3 339 84.7
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 4.2e-163 578.2 332 85.8
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 5.5e-163 577.8 320 88.8
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 5.5e-163 577.8 327 86.5
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 5.5e-163 577.8 338 84.6
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 5.5e-163 577.8 362 79.8
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 7.2e-163 577.4 342 84.5
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 7.2e-163 577.4 332 86.4
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 9.4e-163 577.0 332 85.8
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 9.4e-163 577.0 320 88.8
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 1.6e-162 576.2 333 85.6
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 2.7e-162 575.5 332 85.5
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 2.7e-162 575.5 333 83.5
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 3.6e-162 575.1 320 88.4
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 6.1e-162 574.3 338 83.7
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 7.9e-162 573.9 320 88.4
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 7.9e-162 573.9 320 88.1
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 7.9e-162 573.9 339 83.2
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 7.9e-162 573.9 333 83.2
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 1.0e-161 573.5 330 86.1
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 1.0e-161 573.5 321 87.5
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 1.4e-161 573.2 319 86.8
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 3.9e-161 571.6 328 85.1
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 5.1e-161 571.2 339 82.3
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 5.1e-161 571.2 339 82.3
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 5.1e-161 571.2 333 85.3
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 6.7e-161 570.9 317 88.6
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 1.5e-160 569.7 333 83.5
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 1.5e-160 569.7 333 84.4
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 1.5e-160 569.7 339 82.0
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 2.0e-160 569.3 333 84.4
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 3.3e-160 568.5 339 81.7
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 4.3e-160 568.2 333 82.3
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 4.3e-160 568.2 333 83.2
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 5.7e-160 567.8 333 84.4
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 5.7e-160 567.8 328 84.5
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.1e-158 563.5 330 84.5
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 1.4e-158 563.1 333 81.7
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.8e-158 562.8 315 87.6
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 9.1e-158 560.5 333 81.7
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 2.0e-157 559.3 329 84.5
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 2.6e-157 558.9 333 84.1
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 2.9e-156 555.4 320 86.2
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 5.0e-156 554.7 333 81.1
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 8.5e-156 553.9 339 79.9
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 2.7e-154 548.9 361 76.7
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 3.6e-154 548.5 333 80.5
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.0e-153 547.0 328 82.0
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.4e-153 546.6 335 79.7
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 3.9e-153 545.0 346 79.8
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 3.3e-152 542.0 339 77.6
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 8.2e-151 537.3 315 81.6
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 1.1e-150 537.0 385 71.9
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 8.5e-148 527.3 333 76.9
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 4.2e-147 525.0 333 77.8
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 1.8e-145 519.6 330 77.0
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 1.8e-145 519.6 324 79.0
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 3.0e-145 518.8 333 75.1
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 1.5e-144 516.5 333 75.7
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 1.1e-142 510.4 339 77.0
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 2.4e-142 509.2 334 75.4
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 3.5e-141 505.4 313 78.0
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 1.0e-140 503.8 332 72.9
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 1.9e-131 473.0 312 73.1
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 1.9e-131 473.0 315 72.1
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 1.2e-122 443.7 319 67.1
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 8.9e-121 437.6 339 68.7
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 3.4e-120 435.6 333 67.3
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 8.0e-114 414.5 250 81.2
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 6.4e-111 404.8 239 81.6
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 1.9e-110 403.3 246 79.3
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 3.2e-110 402.5 245 82.4
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 2.7e-109 399.4 242 80.6
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 2.8e-106 389.4 322 63.7
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 1.7e-103 380.2 210 88.6
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 2.1e-101 373.2 225 81.8
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 4.6e-101 372.1 220 83.2
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 7.8e-101 371.3 208 87.0
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 2.2e-95 353.2 326 55.8
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 2.3e-92 343.2 194 84.5
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 3.0e-92 342.8 193 86.0
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 3.8e-87 325.9 187 84.0
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 1.9e-86 323.6 321 56.4
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 8.4e-79 298.1 242 62.0
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 4.8e-74 282.3 171 81.9
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 6.9e-73 278.5 195 66.7
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.4e-62 244.2 135 88.9
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 1.6e-61 240.7 139 84.9
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 3.9e-52 209.5 127 78.0
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 1.3e-50 204.5 155 63.9
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 2.5e-46 190.3 148 69.6
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 1.3e-39 167.9 87 93.1
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 9.7e-35 151.8 102 72.5
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 4.8e-34 149.4 85 88.2
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 1.2e-32 144.8 96 74.0
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 1.7e-31 141.0 74 90.5
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 6.5e-31 139.0 104 66.3
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 8.5e-31 138.7 87 79.3
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 9.4e-30 135.2 78 82.1
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 1.7e-23 114.4 86 67.4
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 4.7e-21 106.3 124 54.8
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.0e-20 105.1 127 50.4
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 2.0e-19 100.9 286 27.3
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 3.4e-19 100.1 320 28.1
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 5.7e-19 99.4 108 51.9
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 1.4e-17 94.7 232 29.3
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.1e-17 93.2 77 61.0
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 4.1e-17 93.2 281 29.9
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 2.0e-16 90.9 73 60.3
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 3.8e-15 86.7 272 29.8
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 5.2e-12 76.3 103 46.6
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 7.5e-11 72.4 191 30.4
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 1.4e-09 68.2 52 67.3
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.2e-08 65.1 47 68.1
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 5.6e-06 56.2 42 61.9


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