Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 1.1e-306 1055.8 527 100.0
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 3.8e-171 605.5 534 59.0
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 3.3e-162 575.9 516 57.6
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 3.6e-161 572.4 521 57.2
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 4.0e-160 568.9 534 55.4
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 2.4e-157 559.7 528 55.1
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 5.9e-156 555.1 523 55.8
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 7.8e-156 554.7 527 55.0
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 3.9e-155 552.4 545 54.5
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 8.6e-155 551.2 527 54.3
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 1.9e-154 550.1 543 53.0
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.3e-154 548.1 534 54.1
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 1.3e-150 537.3 523 54.9
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.9e-150 536.2 526 54.6
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 3.7e-150 535.8 608 48.5
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 8.3e-150 534.6 539 53.1
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 4.1e-149 532.3 531 52.4
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 2.0e-148 530.0 532 53.8
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 4.6e-148 528.9 532 53.6
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 6.0e-148 528.5 533 52.7
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 1.1e-146 524.2 603 49.1
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 5.6e-146 521.9 530 52.5
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 9.5e-146 521.2 518 52.9
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 8.0e-145 518.1 518 54.4
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 8.0e-145 518.1 528 52.3
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 3.1e-144 516.2 553 49.9
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.2e-143 514.2 534 50.6
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.5e-143 513.8 523 51.8
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 2.0e-143 513.5 534 52.2
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 4.4e-143 512.3 519 53.8
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 4.4e-143 512.3 517 53.0
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 7.5e-143 511.5 531 52.4
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 1.7e-142 510.4 525 51.8
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 4.9e-142 508.8 522 52.7
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.1e-141 507.7 516 53.3
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 1.4e-141 507.3 520 51.3
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 1.4e-141 507.3 538 50.9
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 1.4e-141 507.3 537 51.6
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 2.4e-141 506.5 540 50.6
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 3.2e-141 506.1 537 51.6
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 4.1e-141 505.8 528 51.7
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 4.1e-141 505.8 530 52.1
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 5.4e-141 505.4 540 51.3
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 5.4e-141 505.4 503 53.3
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 9.2e-141 504.6 515 51.7
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 2.1e-140 503.4 512 52.3
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 2.1e-140 503.4 509 53.2
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 6.0e-140 501.9 527 51.6
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 2.3e-139 500.0 534 51.7
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 2.3e-139 500.0 531 52.0
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 3.3e-138 496.1 552 49.3
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 5.6e-138 495.4 551 50.6
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 6.2e-137 491.9 532 50.4
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.1e-136 491.1 528 50.4
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 8.9e-136 488.0 545 48.6
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 2.0e-135 486.9 530 50.9
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 2.6e-135 486.5 514 50.2
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 3.4e-135 486.1 532 49.1
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 1.1e-133 481.1 413 59.3
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 4.1e-133 479.2 453 56.1
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 9.2e-133 478.0 512 49.8
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 3.5e-132 476.1 478 54.0
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.0e-131 474.6 575 48.5
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 5.1e-131 472.2 532 49.6
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.2e-129 467.6 507 51.1
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 2.1e-129 466.8 507 51.1
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 2.8e-129 466.5 518 50.0
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 1.4e-128 464.2 544 47.4
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 5.2e-128 462.2 503 52.3
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 5.2e-128 462.2 503 52.3
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 5.2e-128 462.2 503 52.3
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 6.8e-128 461.8 506 51.0
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 8.9e-128 461.5 503 50.3
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 5.8e-127 458.8 504 50.0
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 5.8e-127 458.8 504 51.0
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.9e-125 453.8 503 50.3
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.6e-124 450.7 523 49.5
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 1.6e-124 450.7 459 51.9
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.0e-123 448.0 504 49.4
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 6.6e-123 445.3 503 49.3
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 1.5e-122 444.1 458 52.6
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 1.9e-122 443.7 524 47.9
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 1.3e-121 441.0 505 48.9
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 1.4e-120 437.6 429 55.9
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.4e-120 437.6 468 51.7
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 6.9e-120 435.3 529 47.6
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 9.9e-119 431.4 544 47.1
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 2.9e-118 429.9 556 43.5
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.3e-115 421.0 526 45.2
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.3e-115 420.2 504 48.0
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.5e-114 417.5 534 46.8
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 3.6e-113 412.9 508 48.2
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 6.2e-113 412.1 536 42.0
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 1.4e-112 411.0 529 44.0
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 9.0e-112 408.3 545 45.0
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 3.4e-111 406.4 386 54.1
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.1e-108 397.1 254 72.0
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.9e-106 390.6 325 60.6
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 1.1e-104 384.8 373 53.1
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 4.8e-97 359.4 255 66.3
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 4.1e-88 329.7 287 55.4
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 6.1e-84 315.8 283 57.6
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 5.1e-83 312.8 443 43.8
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 5.1e-83 312.8 218 66.5
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 6.9e-80 302.4 211 67.8
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 6.1e-76 289.3 463 36.9
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.1e-74 285.0 408 43.1
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 2.2e-62 244.2 246 52.4
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 2.9e-54 217.2 264 43.9
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.6e-52 211.5 489 30.9
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 3.0e-43 180.6 140 62.9
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 2.6e-34 151.0 233 40.3
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 5.8e-34 149.8 201 43.8
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.9e-29 134.8 125 56.8
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 6.8e-27 126.3 189 39.2
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 4.6e-23 113.6 234 38.0
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.4e-19 102.1 152 40.1
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 2.3e-19 101.3 106 52.8
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 1.5e-18 98.6 180 32.8
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 4.4e-18 97.1 310 25.8
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.3e-17 95.5 242 30.2
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 2.2e-17 94.7 44 93.2
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 8.4e-17 92.8 138 37.7
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 7.8e-15 86.3 165 35.8
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.3e-14 85.5 161 37.9
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 4.7e-12 77.0 101 42.6
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 3.1e-11 74.3 39 79.5
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.5e-10 72.0 155 29.0
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 2.6e-10 71.2 65 56.9
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 9.9e-10 69.3 128 36.7
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 3.0e-06 57.8 38 65.8


User provided reference genes

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