Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G236 Amborella trichopoda HOM05D003893 ORTHO05D005167 1.1e-107 393.3 200 100.0
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 1.9e-25 120.2 163 44.2
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 5.4e-25 118.6 169 43.2
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 6.0e-24 115.2 157 41.4
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 1.0e-23 114.4 161 42.2
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 1.7e-23 113.6 162 42.0
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 3.0e-23 112.8 162 42.0
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 3.9e-23 112.5 157 41.4
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 5.0e-23 112.1 157 41.4
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 6.6e-23 111.7 157 40.8
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 1.1e-22 110.9 164 41.5
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 1.5e-22 110.5 165 43.0
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 1.9e-22 110.2 164 39.6
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 2.5e-22 109.8 161 40.4
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 2.5e-22 109.8 156 41.0
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 9.5e-22 107.8 162 40.1
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 9.5e-22 107.8 158 41.8
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 1.2e-21 107.5 160 39.4
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 1.2e-21 107.5 156 39.7
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 2.8e-21 106.3 161 41.6
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 2.8e-21 106.3 167 36.5
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 4.7e-21 105.5 162 38.9
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 8.1e-21 104.8 167 38.3
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 1.1e-20 104.4 162 40.1
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 1.1e-20 104.4 157 41.4
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 1.4e-20 104.0 163 41.1
Cpa.g.sc98.30 Carica papaya HOM05D003893 ORTHO05D005167 1.8e-20 103.6 157 41.4
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 3.1e-20 102.8 161 38.5
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 3.1e-20 102.8 157 42.7
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 3.1e-20 102.8 161 41.0
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 6.8e-20 101.7 161 41.0
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 6.8e-20 101.7 161 38.5
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 6.8e-20 101.7 165 37.6
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 6.8e-20 101.7 157 40.8
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 6.8e-20 101.7 161 39.8
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 8.9e-20 101.3 161 39.1
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 1.2e-19 100.9 157 39.5
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.2e-19 100.9 164 38.4
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 2.0e-19 100.1 157 40.1
Haze_08366 Corylus avellana HOM05D003893 ORTHO05D005167 2.6e-19 99.8 157 39.5
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 2.6e-19 99.8 165 38.2
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 3.4e-19 99.4 157 38.9
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 4.4e-19 99.0 159 38.4
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 4.4e-19 99.0 158 38.6
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 4.4e-19 99.0 158 38.6
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 4.4e-19 99.0 157 39.5
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 5.8e-19 98.6 158 38.6
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 7.5e-19 98.2 157 39.5
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 9.9e-19 97.8 173 35.3
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 1.3e-18 97.4 166 36.1
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 4.9e-18 95.5 155 36.1
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 6.4e-18 95.1 162 38.3
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 6.4e-18 95.1 158 36.7
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 6.4e-18 95.1 159 39.6
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 1.4e-17 94.0 161 36.6
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 1.9e-17 93.6 162 35.8
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 5.4e-17 92.0 184 33.7
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 5.4e-17 92.0 162 37.7
Ca_30504_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 5.4e-17 92.0 162 37.7
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 7.1e-17 91.7 171 36.8
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 7.1e-17 91.7 158 34.8
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 7.1e-17 91.7 161 35.4
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 1.2e-16 90.9 157 36.9
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 1.2e-16 90.9 161 36.0
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 1.6e-16 90.5 158 34.8
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 2.7e-16 89.7 159 37.1
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 4.6e-16 89.0 165 34.5
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 4.6e-16 89.0 157 35.0
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 4.6e-16 89.0 157 36.3
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 6.0e-16 88.6 158 35.4
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 6.0e-16 88.6 158 34.8
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 7.8e-16 88.2 158 34.8
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 7.8e-16 88.2 158 35.4
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 7.8e-16 88.2 157 36.9
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 7.8e-16 88.2 157 36.3
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 1.0e-15 87.8 158 34.8
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 1.7e-15 87.0 158 33.5
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 1.7e-15 87.0 158 34.2
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 2.3e-15 86.7 158 34.8
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 3.9e-15 85.9 157 36.3
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 6.6e-15 85.1 129 41.1
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 8.6e-15 84.7 131 42.7
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 2.1e-13 80.1 169 34.3
SalBow1G6370 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.8e-12 77.0 139 37.4
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 3.1e-12 76.3 180 31.1
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 9.9e-11 71.2 77 45.5
CDE12G0047 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 1.3e-10 70.9 115 39.1
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 1.0e-07 61.2 121 36.4


User provided reference genes

Program Settings