Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 3.6e-118 428.3 226 100.0
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 7.1e-90 334.3 225 76.0
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 1.5e-87 326.6 225 74.2
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 4.7e-86 321.6 225 73.3
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 5.2e-85 318.2 224 74.6
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 1.2e-84 317.0 225 72.0
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 1.3e-83 313.5 225 71.6
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.7e-83 313.2 225 71.6
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 8.4e-83 310.8 225 72.4
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 1.9e-82 309.7 224 72.8
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 3.2e-82 308.9 224 71.0
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 7.1e-82 307.8 225 70.2
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 1.2e-81 307.0 215 74.4
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 3.5e-81 305.4 225 69.8
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.6e-81 305.1 225 69.8
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 4.6e-81 305.1 225 68.9
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 7.8e-81 304.3 225 70.2
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 7.8e-81 304.3 225 69.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 7.8e-81 304.3 225 70.2
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.0e-80 303.9 224 70.5
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.3e-80 303.5 225 69.3
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 1.7e-80 303.1 225 69.3
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 2.3e-80 302.8 225 68.9
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 2.3e-80 302.8 224 68.8
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 3.0e-80 302.4 225 69.3
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 3.9e-80 302.0 225 69.3
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 3.9e-80 302.0 225 69.3
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 3.9e-80 302.0 225 69.3
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 5.1e-80 301.6 225 68.4
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 8.7e-80 300.8 225 68.0
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 1.1e-79 300.4 225 68.0
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 1.5e-79 300.1 225 68.0
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 1.9e-79 299.7 225 68.9
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 2.5e-79 299.3 225 68.4
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 2.5e-79 299.3 225 68.4
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.5e-79 299.3 225 67.6
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 2.5e-79 299.3 225 64.9
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 1.3e-78 297.0 225 68.0
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.6e-78 296.6 224 67.9
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 3.6e-78 295.4 224 67.9
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 3.6e-78 295.4 224 68.3
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 6.2e-78 294.7 225 67.6
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 6.2e-78 294.7 216 69.0
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 8.1e-78 294.3 225 65.8
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.1e-77 293.9 251 62.5
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 2.4e-77 292.7 225 68.0
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 2.4e-77 292.7 235 65.1
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 3.1e-77 292.4 225 68.0
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 6.9e-77 291.2 225 67.1
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 6.9e-77 291.2 225 67.1
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 6.9e-77 291.2 224 65.2
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 9.0e-77 290.8 226 68.1
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.5e-76 290.0 225 67.1
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 5.8e-76 288.1 224 66.1
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.8e-75 285.4 220 67.3
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 4.9e-75 285.0 225 66.7
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 1.9e-74 283.1 225 64.9
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 1.9e-74 283.1 224 64.3
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 2.4e-74 282.7 224 63.8
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 3.2e-74 282.3 224 65.6
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 9.3e-74 280.8 243 63.4
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 9.3e-74 280.8 257 59.1
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 9.3e-74 280.8 265 58.1
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 1.2e-73 280.4 209 67.0
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.1e-73 279.6 225 65.3
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 6.0e-73 278.1 225 61.3
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 6.0e-73 278.1 225 60.4
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 7.9e-73 277.7 224 63.4
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 7.3e-71 271.2 225 59.6
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.6e-70 270.0 232 63.4
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 2.1e-70 269.6 226 60.6
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 2.1e-70 269.6 225 59.6
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 2.1e-70 269.6 208 66.8
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 2.8e-70 269.2 223 64.1
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 2.8e-70 269.2 215 65.1
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.8e-70 268.5 220 64.5
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 8.1e-70 267.7 225 59.1
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 8.1e-70 267.7 225 60.9
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 2.4e-69 266.2 225 62.7
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 3.1e-69 265.8 223 63.7
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 6.9e-69 264.6 225 58.7
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 6.9e-69 264.6 225 58.7
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 6.9e-69 264.6 207 65.7
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 1.2e-68 263.8 225 58.7
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 1.2e-68 263.8 225 58.7
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 1.2e-68 263.8 225 58.7
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 5.8e-68 261.5 204 66.7
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 9.9e-68 260.8 203 68.0
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 1.3e-67 260.4 208 61.5
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 1.3e-67 260.4 240 60.8
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.7e-67 260.0 225 61.8
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 3.8e-67 258.8 194 68.6
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.1e-66 257.3 225 61.8
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 2.4e-66 256.1 224 60.3
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 3.2e-66 255.8 224 62.5
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 3.5e-65 252.3 225 57.3
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 6.0e-65 251.5 201 64.2
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 3.9e-64 248.8 225 58.7
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 5.1e-64 248.4 224 58.0
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 9.6e-63 244.2 195 65.6
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 1.8e-61 240.0 222 54.1
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 2.2e-59 233.0 223 57.0
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 7.1e-58 228.0 223 55.6
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 7.1e-58 228.0 223 55.6
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 2.8e-54 216.1 218 50.5
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 1.8e-48 196.8 218 49.5
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 2.7e-41 172.9 198 47.5
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 4.6e-41 172.2 159 60.4
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 1.1e-39 167.5 140 60.7
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 3.9e-32 142.5 211 44.1
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 3.8e-27 125.9 99 66.7
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.2e-25 120.9 164 46.3
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 1.3e-22 110.9 94 55.3
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 3.6e-17 92.8 195 32.8
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.2e-15 87.8 218 28.0
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 1.0e-11 74.7 219 28.8
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 3.6e-09 66.2 119 41.2
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 2.3e-08 63.5 109 43.1


User provided reference genes

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