Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G140 Amborella trichopoda HOM05D000947 ORTHO05D000079 2.3e-66 255.4 124 100.0
Cfa003091 Carpinus fangiana HOM05D000947 ORTHO05D000079 2.6e-17 92.4 123 48.8
TPR.G35459 Trifolium pratense HOM05D000947 ORTHO05D000079 1.3e-16 90.1 121 45.5
Gohir.D05G031200 Gossypium hirsutum HOM05D000947 ORTHO05D000079 6.3e-16 87.8 124 45.2
Thecc.09G089800 Theobroma cacao HOM05D000947 ORTHO05D000079 8.3e-16 87.4 122 45.1
Actinidia39720 Actinidia chinensis HOM05D000947 ORTHO05D000079 1.1e-15 87.0 128 45.3
Haze_25908 Corylus avellana HOM05D000947 ORTHO05D000079 1.4e-15 86.7 124 46.0
Dinv36764 Davidia involucrata HOM05D000947 ORTHO05D000079 1.4e-15 86.7 125 45.6
VMungo1215G0469 Vigna mungo HOM05D000947 ORTHO05D000079 1.8e-15 86.3 122 45.9
BcaB01g04423 Brassica carinata HOM05D000947 ORTHO05D000079 4.1e-15 85.1 145 39.3
Cpa.g.sc93.28 Carica papaya HOM05D000947 ORTHO05D000079 4.1e-15 85.1 126 42.9
Manes.16G102600 Manihot esculenta HOM05D000947 ORTHO05D000079 4.1e-15 85.1 129 48.8
Nn8g38877 Nelumbo nucifera HOM05D000947 ORTHO05D000079 5.4e-15 84.7 126 46.8
MBI04_g34133_MAGBIO Magnolia biondii HOM05D000947 ORTHO05D000079 7.0e-15 84.3 122 43.4
Phvul.003G137100 Phaseolus vulgaris HOM05D000947 ORTHO05D000079 1.6e-14 83.2 127 44.1
Psat1g141680 Pisum sativum HOM05D000947 ORTHO05D000079 1.6e-14 83.2 120 46.7
TAR624G0462 Trochodendron aralioides HOM05D000947 ORTHO05D000079 1.6e-14 83.2 123 46.3
Psat4g014760 Pisum sativum HOM05D000947 ORTHO05D000079 2.0e-14 82.8 125 40.8
Duzib168G0218 Durio zibethinus HOM05D000947 ORTHO05D000079 2.7e-14 82.4 125 44.8
Nn6g35464 Nelumbo nucifera HOM05D000947 ORTHO05D000079 2.7e-14 82.4 123 43.1
Actinidia25254 Actinidia chinensis HOM05D000947 ORTHO05D000079 3.5e-14 82.0 130 43.8
BcaB08g36050 Brassica carinata HOM05D000947 ORTHO05D000079 3.5e-14 82.0 146 37.7
DCAR_032241 Daucus carota HOM05D000947 ORTHO05D000079 3.5e-14 82.0 126 39.7
TPR.G893 Trifolium pratense HOM05D000947 ORTHO05D000079 3.5e-14 82.0 128 48.4
BolC3t13976H Brassica oleracea HOM05D000947 ORTHO05D000079 4.5e-14 81.6 142 38.7
Dinv27985 Davidia involucrata HOM05D000947 ORTHO05D000079 4.5e-14 81.6 122 41.0
vmacro06289 Vaccinium macrocarpon HOM05D000947 ORTHO05D000079 5.9e-14 81.3 125 46.4
Lalb_Chr13g0299731 Lupinus albus HOM05D000947 ORTHO05D000079 7.7e-14 80.9 122 45.1
A03p13120 Brassica napus HOM05D000947 ORTHO05D000079 1.0e-13 80.5 142 38.7
BraA03t10623Z Brassica rapa HOM05D000947 ORTHO05D000079 1.0e-13 80.5 142 38.7
Glyma.09G062800 Glycine max HOM05D000947 ORTHO05D000079 1.0e-13 80.5 122 38.5
Glyma.15G169300 Glycine max HOM05D000947 ORTHO05D000079 1.0e-13 80.5 121 40.5
Medtr4g126350 Medicago truncatula HOM05D000947 ORTHO05D000079 1.0e-13 80.5 134 43.3
TWI63G0009 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 1.3e-13 80.1 128 43.0
PGSC0003DMG400004493 Solanum tuberosum HOM05D000947 ORTHO05D000079 1.7e-13 79.7 128 40.6
GSVIVG01015204001 Vitis vinifera HOM05D000947 ORTHO05D000079 1.7e-13 79.7 128 45.3
C03p15340 Brassica napus HOM05D000947 ORTHO05D000079 2.2e-13 79.3 142 38.0
CARHR270600 Cardamine hirsuta HOM05D000947 ORTHO05D000079 2.9e-13 79.0 142 36.6
Oeu006972.1 Olea europaea HOM05D000947 ORTHO05D000079 3.8e-13 78.6 129 43.4
CiPaw.03G216700 Carya illinoinensis HOM05D000947 ORTHO05D000079 5.0e-13 78.2 126 42.9
COL.COLO4_18205 Corchorus olitorius HOM05D000947 ORTHO05D000079 5.0e-13 78.2 131 41.2
Gorai.009G031400 Gossypium raimondii HOM05D000947 ORTHO05D000079 5.0e-13 78.2 128 42.2
Dinv42316 Davidia involucrata HOM05D000947 ORTHO05D000079 6.5e-13 77.8 118 41.5
Thhalv10025461m.g Eutrema salsugineum HOM05D000947 ORTHO05D000079 8.5e-13 77.4 150 38.0
SalBow6G2589 Salvia bowleyana HOM05D000947 ORTHO05D000079 8.5e-13 77.4 123 43.9
TWI34G0236 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 8.5e-13 77.4 129 42.6
ClCG03G015640 Citrullus lanatus HOM05D000947 ORTHO05D000079 1.1e-12 77.0 126 42.9
Gohir.A06G072400 Gossypium hirsutum HOM05D000947 ORTHO05D000079 1.1e-12 77.0 128 43.0
arahy.Tifrunner.gnm1.ann1.QY7BN7 Arachis hypogaea HOM05D000947 ORTHO05D000079 1.9e-12 76.3 127 39.4
Manes.03G033200 Manihot esculenta HOM05D000947 ORTHO05D000079 1.9e-12 76.3 131 41.2
TAR626G1258 Trochodendron aralioides HOM05D000947 ORTHO05D000079 1.9e-12 76.3 123 40.7
Migut.J00606 Erythranthe guttata HOM05D000947 ORTHO05D000079 2.5e-12 75.9 132 39.4
CSS0025336 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 3.2e-12 75.5 122 40.2
CSS0047041 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 3.2e-12 75.5 122 40.2
Gohir.A05G029800 Gossypium hirsutum HOM05D000947 ORTHO05D000079 3.2e-12 75.5 125 41.6
FAN19G1273 Fragaria x ananassa HOM05D000947 ORTHO05D000079 4.2e-12 75.1 135 39.3
BcaB05g22295 Brassica carinata HOM05D000947 ORTHO05D000079 5.5e-12 74.7 155 38.1
C07p54720 Brassica napus HOM05D000947 ORTHO05D000079 7.2e-12 74.3 153 36.6
BolC7t45961H Brassica oleracea HOM05D000947 ORTHO05D000079 7.2e-12 74.3 153 36.6
PGR142G2851 Punica granatum HOM05D000947 ORTHO05D000079 7.2e-12 74.3 133 42.9
AL7G26820 Arabidopsis lyrata HOM05D000947 ORTHO05D000079 9.4e-12 73.9 141 39.7
BraA03t14723Z Brassica rapa HOM05D000947 ORTHO05D000079 9.4e-12 73.9 153 38.6
CDE05G2491 Ceratophyllum demersum HOM05D000947 ORTHO05D000079 9.4e-12 73.9 122 40.2
AT4G26150 Arabidopsis thaliana HOM05D000947 ORTHO05D000079 1.2e-11 73.6 135 36.3
Lalb_Chr07g0180811 Lupinus albus HOM05D000947 ORTHO05D000079 1.2e-11 73.6 125 40.8
Carub.0007s1480 Capsella rubella HOM05D000947 ORTHO05D000079 1.6e-11 73.2 133 42.1
Haze_18190 Corylus avellana HOM05D000947 ORTHO05D000079 2.1e-11 72.8 129 40.3
Lj7A675G39 Lonicera japonica HOM05D000947 ORTHO05D000079 2.1e-11 72.8 132 40.2
Nitab4.5_0009931g0020 Nicotiana tabacum HOM05D000947 ORTHO05D000079 2.1e-11 72.8 139 37.4
Sp7g24170 Schrenkiella parvula HOM05D000947 ORTHO05D000079 2.1e-11 72.8 152 36.2
A10p14140 Brassica napus HOM05D000947 ORTHO05D000079 2.7e-11 72.4 150 35.3
BraA10t43506Z Brassica rapa HOM05D000947 ORTHO05D000079 2.7e-11 72.4 150 35.3
CDE05G2735 Ceratophyllum demersum HOM05D000947 ORTHO05D000079 2.7e-11 72.4 122 40.2
Medtr2g038720 Medicago truncatula HOM05D000947 ORTHO05D000079 2.7e-11 72.4 121 43.8
SGA_v2.0_scaffold23G10000 Striga asiatica HOM05D000947 ORTHO05D000079 2.7e-11 72.4 129 39.5
BcaNung02447 Brassica carinata HOM05D000947 ORTHO05D000079 3.6e-11 72.0 148 37.2
arahy.Tifrunner.gnm1.ann1.F7WS4I Arachis hypogaea HOM05D000947 ORTHO05D000079 4.7e-11 71.6 125 38.4
MSTRG.19517 Avicennia marina HOM05D000947 ORTHO05D000079 6.1e-11 71.2 132 40.2
BcaC04g20049 Brassica carinata HOM05D000947 ORTHO05D000079 6.1e-11 71.2 154 36.4
BolC9t57690H Brassica oleracea HOM05D000947 ORTHO05D000079 6.1e-11 71.2 154 36.4
Ca_21277_v3 Cicer arietinum L. HOM05D000947 ORTHO05D000079 6.1e-11 71.2 122 36.9
Ciclev10009004m.g Citrus clementina HOM05D000947 ORTHO05D000079 6.1e-11 71.2 122 38.5
HanXRQChr03g0060441 Helianthus annuus HOM05D000947 ORTHO05D000079 6.1e-11 71.2 122 44.3
C09p48470 Brassica napus HOM05D000947 ORTHO05D000079 8.0e-11 70.9 154 36.4
Gohir.D06G087500 Gossypium hirsutum HOM05D000947 ORTHO05D000079 8.0e-11 70.9 123 35.8
Gorai.010G101100 Gossypium raimondii HOM05D000947 ORTHO05D000079 8.0e-11 70.9 123 35.8
Manes.03G047800 Manihot esculenta HOM05D000947 ORTHO05D000079 8.0e-11 70.9 126 42.1
QL02p001206 Quercus lobata HOM05D000947 ORTHO05D000079 8.0e-11 70.9 121 41.3
BcaC09g50673 Brassica carinata HOM05D000947 ORTHO05D000079 1.0e-10 70.5 148 35.1
C01p21950 Brassica napus HOM05D000947 ORTHO05D000079 1.0e-10 70.5 148 35.1
BolC1t02124H Brassica oleracea HOM05D000947 ORTHO05D000079 1.0e-10 70.5 148 35.1
RcHm_v2.0_Chr2g0093271 Rosa chinensis HOM05D000947 ORTHO05D000079 1.0e-10 70.5 131 37.4
TAR636G0193 Trochodendron aralioides HOM05D000947 ORTHO05D000079 1.0e-10 70.5 126 42.1
Cfa017954 Carpinus fangiana HOM05D000947 ORTHO05D000079 1.4e-10 70.1 128 39.8
Eucgr.C03048 Eucalyptus grandis HOM05D000947 ORTHO05D000079 1.4e-10 70.1 129 40.3
Gorai.010G082800 Gossypium raimondii HOM05D000947 ORTHO05D000079 1.4e-10 70.1 128 40.6
Hma1.2p1_0798F.1_g219800 Hydrangea macrophylla HOM05D000947 ORTHO05D000079 1.4e-10 70.1 130 39.2
Rhsim11G0044100 Rhododendron simsii HOM05D000947 ORTHO05D000079 1.4e-10 70.1 120 37.5
Sed0013555 Sechium edule HOM05D000947 ORTHO05D000079 1.4e-10 70.1 127 40.2
AT5G56860 Arabidopsis thaliana HOM05D000947 ORTHO05D000079 1.8e-10 69.7 149 33.6
A03p56530 Brassica napus HOM05D000947 ORTHO05D000079 2.3e-10 69.3 156 35.3
Thhalv10013793m.g Eutrema salsugineum HOM05D000947 ORTHO05D000079 2.3e-10 69.3 140 33.6
Gohir.D05G043900 Gossypium hirsutum HOM05D000947 ORTHO05D000079 2.3e-10 69.3 125 38.4
Gohir.D06G071000 Gossypium hirsutum HOM05D000947 ORTHO05D000079 2.3e-10 69.3 128 40.6
Gorai.009G045000 Gossypium raimondii HOM05D000947 ORTHO05D000079 2.3e-10 69.3 125 38.4
Aqoxy7G01220 Aquilegia oxysepala HOM05D000947 ORTHO05D000079 3.0e-10 68.9 131 36.6
Duzib168G0908 Durio zibethinus HOM05D000947 ORTHO05D000079 3.0e-10 68.9 127 40.9
DCAR_011976 Daucus carota HOM05D000947 ORTHO05D000079 4.0e-10 68.6 127 37.8
Hma1.2p1_0800F.1_g220120 Hydrangea macrophylla HOM05D000947 ORTHO05D000079 4.0e-10 68.6 127 37.0
Rhsim03G0232600 Rhododendron simsii HOM05D000947 ORTHO05D000079 4.0e-10 68.6 127 36.2
Rhsim05G0021900 Rhododendron simsii HOM05D000947 ORTHO05D000079 4.0e-10 68.6 138 37.0
Peaxi162Scf00498g00122 Petunia axillaris HOM05D000947 ORTHO05D000079 5.2e-10 68.2 135 35.6
MD15G1060100 Malus domestica HOM05D000947 ORTHO05D000079 6.8e-10 67.8 133 39.8
VMungo1309G0324 Vigna mungo HOM05D000947 ORTHO05D000079 6.8e-10 67.8 122 38.5
CiPaw.16G028700 Carya illinoinensis HOM05D000947 ORTHO05D000079 8.8e-10 67.4 129 38.8
Gohir.A05G042200 Gossypium hirsutum HOM05D000947 ORTHO05D000079 8.8e-10 67.4 123 38.2
Lj4g0025871 Lotus japonicus HOM05D000947 ORTHO05D000079 8.8e-10 67.4 131 38.2
Manes.16G080400 Manihot esculenta HOM05D000947 ORTHO05D000079 8.8e-10 67.4 125 40.0
Gohir.A06G089500 Gossypium hirsutum HOM05D000947 ORTHO05D000079 1.2e-09 67.0 127 37.0
Lsat_1_v5_gn_5_145340 Lactuca sativa HOM05D000947 ORTHO05D000079 1.2e-09 67.0 146 31.5
MD08G1061600 Malus domestica HOM05D000947 ORTHO05D000079 1.2e-09 67.0 128 38.3
Thecc.09G053800 Theobroma cacao HOM05D000947 ORTHO05D000079 1.2e-09 67.0 125 37.6
Cc06_g11380 Coffea canephora HOM05D000947 ORTHO05D000079 1.5e-09 66.6 128 35.9
Sp6g18580 Schrenkiella parvula HOM05D000947 ORTHO05D000079 1.5e-09 66.6 150 36.0
Solyc07g038160.4 Solanum lycopersicum HOM05D000947 ORTHO05D000079 1.5e-09 66.6 122 35.2
Sopen07g018310 Solanum pennellii HOM05D000947 ORTHO05D000079 1.5e-09 66.6 122 35.2
ATR0749G084 Amborella trichopoda HOM05D000947 ORTHO05D000079 2.0e-09 66.2 126 38.1
BraA01t01698Z Brassica rapa HOM05D000947 ORTHO05D000079 2.6e-09 65.9 148 33.8
CiPaw.15G038900 Carya illinoinensis HOM05D000947 ORTHO05D000079 2.6e-09 65.9 143 37.1
Ciclev10008943m.g Citrus clementina HOM05D000947 ORTHO05D000079 3.4e-09 65.5 123 36.6
TWI63G0044 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 3.4e-09 65.5 117 41.0
Potri.018G053600 Populus trichocarpa HOM05D000947 ORTHO05D000079 4.4e-09 65.1 125 39.2
Oeu042649.1 Olea europaea HOM05D000947 ORTHO05D000079 5.7e-09 64.7 128 36.7
TWI34G0815 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 5.7e-09 64.7 123 38.2
Lalb_Chr08g0232061 Lupinus albus HOM05D000947 ORTHO05D000079 7.5e-09 64.3 124 33.9
Prupe.1G412000 Prunus persica HOM05D000947 ORTHO05D000079 7.5e-09 64.3 128 39.8
Glyma.13G103900 Glycine max HOM05D000947 ORTHO05D000079 1.3e-08 63.5 121 38.0
SGA_v2.0_scaffold21G09372 Striga asiatica HOM05D000947 ORTHO05D000079 1.3e-08 63.5 130 36.2
AL8G32710 Arabidopsis lyrata HOM05D000947 ORTHO05D000079 1.7e-08 63.2 155 32.9
Sabra18G0048900 Salix brachista HOM05D000947 ORTHO05D000079 1.7e-08 63.2 122 35.2
Eucgr.C03895 Eucalyptus grandis HOM05D000947 ORTHO05D000079 2.2e-08 62.8 129 35.7
Sc18g0002000 Simmondsia chinensis HOM05D000947 ORTHO05D000079 2.8e-08 62.4 128 34.4
Eucgr.C00899 Eucalyptus grandis HOM05D000947 ORTHO05D000079 3.7e-08 62.0 129 33.3
FvH4_1g07390 Fragaria vesca HOM05D000947 ORTHO05D000079 4.9e-08 61.6 137 33.6
Lj6g0026749 Lotus japonicus HOM05D000947 ORTHO05D000079 4.9e-08 61.6 125 36.0
MELO3C016870.2 Cucumis melo HOM05D000947 ORTHO05D000079 6.3e-08 61.2 156 34.0
CsaV3_1G040390 Cucumis sativus L. HOM05D000947 ORTHO05D000079 6.3e-08 61.2 123 35.0
ECA240G0019 Erigeron canadensis HOM05D000947 ORTHO05D000079 6.3e-08 61.2 130 36.9
A01p17430 Brassica napus HOM05D000947 ORTHO05D000079 8.3e-08 60.8 148 33.1
BcaC03g14201 Brassica carinata HOM05D000947 ORTHO05D000079 1.1e-07 60.5 149 32.2
BcaC06g32766 Brassica carinata HOM05D000947 ORTHO05D000079 1.1e-07 60.5 138 31.2
C02p14870 Brassica napus HOM05D000947 ORTHO05D000079 1.1e-07 60.5 149 32.2
BolC2t07616H Brassica oleracea HOM05D000947 ORTHO05D000079 1.1e-07 60.5 149 32.2
MSTRG.10566 Avicennia marina HOM05D000947 ORTHO05D000079 1.4e-07 60.1 132 34.1
COL.COLO4_21058 Corchorus olitorius HOM05D000947 ORTHO05D000079 1.4e-07 60.1 126 34.9
PGSC0003DMG400000280 Solanum tuberosum HOM05D000947 ORTHO05D000079 1.4e-07 60.1 153 32.7
ClCG05G017860 Citrullus lanatus HOM05D000947 ORTHO05D000079 1.8e-07 59.7 140 35.0
Prupe.7G210100 Prunus persica HOM05D000947 ORTHO05D000079 1.8e-07 59.7 137 35.8
AUR62022078 Chenopodium quinoa HOM05D000947 ORTHO05D000079 2.4e-07 59.3 146 34.2
MBI01_g09952_MAGBIO Magnolia biondii HOM05D000947 ORTHO05D000079 2.4e-07 59.3 129 36.4
Nitab4.5_0005033g0050 Nicotiana tabacum HOM05D000947 ORTHO05D000079 2.4e-07 59.3 133 34.6
Lj5g0028237 Lotus japonicus HOM05D000947 ORTHO05D000079 3.1e-07 58.9 128 38.3
Sopen12g003760 Solanum pennellii HOM05D000947 ORTHO05D000079 3.1e-07 58.9 163 32.5
GSVIVG01035406001 Vitis vinifera HOM05D000947 ORTHO05D000079 3.1e-07 58.9 128 36.7
Phvul.009G077500 Phaseolus vulgaris HOM05D000947 ORTHO05D000079 4.1e-07 58.5 121 36.4
TAR383G0027 Trochodendron aralioides HOM05D000947 ORTHO05D000079 4.1e-07 58.5 123 38.2
Atru.chr7.1584 Acer truncatum HOM05D000947 ORTHO05D000079 5.4e-07 58.2 43 62.8
DCAR_004426 Daucus carota HOM05D000947 ORTHO05D000079 5.4e-07 58.2 122 36.1
A02p08910 Brassica napus HOM05D000947 ORTHO05D000079 1.2e-06 57.0 150 31.3
BraA02t05960Z Brassica rapa HOM05D000947 ORTHO05D000079 1.2e-06 57.0 150 31.3
MELO3C015468.2 Cucumis melo HOM05D000947 ORTHO05D000079 1.2e-06 57.0 128 32.8
Lsat_1_v5_gn_7_37240 Lactuca sativa HOM05D000947 ORTHO05D000079 1.2e-06 57.0 126 35.7
Solyc12g008830.3 Solanum lycopersicum HOM05D000947 ORTHO05D000079 1.2e-06 57.0 163 31.9
FvH4_2g31930 Fragaria vesca HOM05D000947 ORTHO05D000079 1.6e-06 56.6 125 34.4
FAN24G3149 Fragaria x ananassa HOM05D000947 ORTHO05D000079 1.6e-06 56.6 125 34.4
FAN28G2967 Fragaria x ananassa HOM05D000947 ORTHO05D000079 1.6e-06 56.6 134 32.8
Glyma.17G055200 Glycine max HOM05D000947 ORTHO05D000079 2.0e-06 56.2 120 32.5
VMungo0647G0164 Vigna mungo HOM05D000947 ORTHO05D000079 2.7e-06 55.8 126 38.9
CANSAT56G4332 Cannabis sativa HOM05D000947 ORTHO05D000079 3.5e-06 55.5 132 34.8
Phvul.001G035600 Phaseolus vulgaris HOM05D000947 ORTHO05D000079 3.5e-06 55.5 127 37.0
Aa31LG3G530 Aethionema arabicum HOM05D000947 ORTHO05D000079 5.9e-06 54.7 43 55.8
arahy.Tifrunner.gnm1.ann1.2SUK7S Arachis hypogaea HOM05D000947 ORTHO05D000079 5.9e-06 54.7 137 31.4
Glyma.14G094800 Glycine max HOM05D000947 ORTHO05D000079 5.9e-06 54.7 122 38.5
THA.LOC104818113 Tarenaya hassleriana HOM05D000947 ORTHO05D000079 5.9e-06 54.7 33 72.7


User provided reference genes

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