Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G055 Amborella trichopoda HOM05D003893 ORTHO05D005167 3.9e-290 1000.7 504 100.0
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 4.9e-107 392.5 492 45.1
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 8.1e-94 348.6 469 45.0
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 8.4e-91 338.6 488 41.2
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 1.4e-90 337.8 470 43.4
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 2.4e-90 337.0 475 40.4
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 3.5e-89 333.2 487 41.9
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 2.1e-86 323.9 471 40.8
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 6.2e-86 322.4 466 41.4
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 5.2e-85 319.3 487 39.6
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 1.5e-84 317.8 475 41.5
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 2.6e-84 317.0 493 41.0
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 9.9e-84 315.1 480 42.3
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 1.7e-83 314.3 490 40.8
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 5.4e-82 309.3 489 40.7
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 7.1e-82 308.9 491 41.3
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 1.6e-81 307.8 495 40.4
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 4.6e-81 306.2 480 41.0
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 1.3e-80 304.7 487 38.4
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 3.0e-80 303.5 469 39.4
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 3.3e-79 300.1 484 37.6
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 2.8e-78 297.0 490 37.1
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 3.6e-78 296.6 467 40.5
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 4.8e-78 296.2 487 38.2
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 1.4e-77 294.7 469 39.4
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 4.0e-77 293.1 468 37.8
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 5.3e-77 292.7 469 38.2
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 9.0e-77 292.0 488 37.3
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 1.2e-76 291.6 467 39.8
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 3.4e-76 290.0 467 37.9
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 3.4e-76 290.0 466 38.0
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 5.8e-76 289.3 468 38.2
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 7.6e-76 288.9 469 36.9
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 9.9e-76 288.5 467 37.7
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 2.2e-75 287.3 487 37.6
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 8.4e-75 285.4 494 35.8
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 1.1e-74 285.0 466 38.4
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 1.4e-74 284.6 474 36.7
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 1.9e-74 284.3 482 37.1
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 1.9e-74 284.3 482 37.1
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 1.2e-73 281.6 514 35.6
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 2.7e-73 280.4 494 37.4
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 3.5e-73 280.0 470 38.1
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 1.0e-72 278.5 486 36.8
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 1.3e-72 278.1 497 38.0
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 3.0e-72 276.9 498 37.3
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 3.9e-72 276.6 471 37.4
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 3.9e-72 276.6 466 37.3
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 3.9e-72 276.6 499 36.9
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 6.7e-72 275.8 478 37.4
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 6.7e-72 275.8 466 37.6
ClCG10G002220 Citrullus lanatus HOM05D003893 ORTHO05D005167 8.7e-72 275.4 476 38.9
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 1.1e-71 275.0 483 37.1
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 1.1e-71 275.0 466 37.1
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 3.3e-71 273.5 471 35.7
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 3.3e-71 273.5 492 37.4
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 7.4e-71 272.3 471 36.1
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 1.3e-70 271.6 504 35.5
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 2.1e-70 270.8 471 38.2
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 3.7e-70 270.0 470 37.0
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 6.2e-70 269.2 488 37.5
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 1.1e-69 268.5 468 38.5
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 2.4e-69 267.3 468 35.3
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 5.3e-69 266.2 467 37.0
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 5.3e-69 266.2 524 35.9
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 2.6e-68 263.8 492 36.2
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 2.2e-67 260.8 496 35.1
SalBow1G0831 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.9e-66 257.7 478 35.6
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 9.3e-66 255.4 485 35.9
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 1.9e-63 247.7 480 34.2
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 4.8e-62 243.0 469 34.1
Haze_08365 Corylus avellana HOM05D003893 ORTHO05D005167 1.1e-61 241.9 391 39.9
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 1.8e-61 241.1 396 37.6
COL.COLO4_22133 Corchorus olitorius HOM05D003893 ORTHO05D005167 5.3e-61 239.6 514 32.9
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 9.0e-61 238.8 494 35.8
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 8.4e-59 232.3 397 36.8
SEGI_27963 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 4.2e-58 229.9 410 36.1
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 6.7e-56 222.6 464 31.7
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 1.1e-55 221.9 477 31.9
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 9.7e-55 218.8 393 36.6
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 2.0e-52 211.1 371 37.7
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 3.4e-52 210.3 318 41.5
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 5.5e-50 203.0 388 35.8
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 3.6e-49 200.3 502 30.7
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 1.0e-43 182.2 495 30.5
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 6.7e-40 169.5 183 49.2
Migut.E01263 Erythranthe guttata HOM05D003893 ORTHO05D005167 2.0e-39 167.9 365 33.4
Nitab4.5_0009451g0070 Nicotiana tabacum HOM05D003893 ORTHO05D005167 2.6e-36 157.5 486 28.2
Os10g0142900 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 8.5e-35 152.5 185 45.4
CiPaw.11G072500 Carya illinoinensis HOM05D003893 ORTHO05D005167 2.7e-25 120.9 304 29.6
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 2.7e-25 120.9 137 48.9
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 1.9e-18 98.2 119 42.9
CDE12G0047 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 2.7e-17 94.4 61 70.5
CBR_g21120 Chara braunii HOM05D003893 ORTHO05D005167 7.5e-15 86.3 287 25.8
BcaC09g49809 Brassica carinata HOM05D003893 ORTHO05D017260 1.6e-09 68.6 107 35.5
C01p32750 Brassica napus HOM05D003893 ORTHO05D017260 1.6e-09 68.6 107 35.5
A01p25860 Brassica napus HOM05D003893 ORTHO05D017260 3.0e-08 64.3 95 40.0


User provided reference genes

Program Settings