Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G548 Amborella trichopoda HOM05D000510 ORTHO05D031064 1.9e-77 292.4 138 100.0
ATR0824G045 Amborella trichopoda HOM05D000510 ORTHO05D006942 1.7e-46 189.5 101 89.1
ATR0559G088 Amborella trichopoda HOM05D000510 ORTHO05D031064 6.1e-44 181.0 103 84.5
MBI08_g14949_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 3.5e-31 138.7 112 58.9
MBI11_g04862_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 1.3e-30 136.7 110 59.1
Nn1g09631 Nelumbo nucifera HOM05D000510 ORTHO05D006942 2.8e-28 129.0 108 54.6
Actinidia39849 Actinidia chinensis HOM05D000510 ORTHO05D006942 1.8e-27 126.3 111 55.0
Os03g0637800 Oryza sativa ssp. japonica HOM05D000510 ORTHO05D006942 2.3e-27 125.9 110 53.6
CDE08G0362 Ceratophyllum demersum HOM05D000510 ORTHO05D006942 5.2e-27 124.8 109 54.1
TAR633G2069 Trochodendron aralioides HOM05D000510 ORTHO05D006942 1.2e-26 123.6 110 52.7
TAR362G0688 Trochodendron aralioides HOM05D000510 ORTHO05D006942 2.0e-26 122.9 110 51.8
Actinidia11302 Actinidia chinensis HOM05D000510 ORTHO05D006942 3.4e-26 122.1 111 52.3
MD04G1040500 Malus domestica HOM05D000510 ORTHO05D006942 4.4e-26 121.7 110 50.9
Sabra07G0104900 Salix brachista HOM05D000510 ORTHO05D006942 4.4e-26 121.7 113 50.4
Haze_01505 Corylus avellana HOM05D000510 ORTHO05D006942 5.7e-26 121.3 110 51.8
Aqoxy2G04122 Aquilegia oxysepala HOM05D000510 ORTHO05D006942 7.5e-26 120.9 112 51.8
Cfa015170 Carpinus fangiana HOM05D000510 ORTHO05D006942 9.8e-26 120.6 110 50.9
Potri.007G128400 Populus trichocarpa HOM05D000510 ORTHO05D006942 1.3e-25 120.2 113 49.6
Sabra17G0019300 Salix brachista HOM05D000510 ORTHO05D006942 1.3e-25 120.2 113 49.6
Cpa.g.sc9.282 Carica papaya HOM05D000510 ORTHO05D006942 1.7e-25 119.8 110 50.9
Eucgr.A00082 Eucalyptus grandis HOM05D000510 ORTHO05D006942 1.7e-25 119.8 113 48.7
Glyma.11G127700 Glycine max HOM05D000510 ORTHO05D006942 2.2e-25 119.4 110 51.8
QL10p048845 Quercus lobata HOM05D000510 ORTHO05D006942 2.2e-25 119.4 110 49.1
Potri.017G029900 Populus trichocarpa HOM05D000510 ORTHO05D006942 4.9e-25 118.2 113 47.8
EL10Ac3g05942 Beta vulgaris HOM05D000510 ORTHO05D006942 6.3e-25 117.9 110 50.0
Duzib151G0818 Durio zibethinus HOM05D000510 ORTHO05D006942 6.3e-25 117.9 110 48.2
Migut.B00097 Erythranthe guttata HOM05D000510 ORTHO05D006942 6.3e-25 117.9 113 46.9
Sc13g0006770 Simmondsia chinensis HOM05D000510 ORTHO05D006942 6.3e-25 117.9 110 49.1
VMungo1127G0022 Vigna mungo HOM05D000510 ORTHO05D006942 6.3e-25 117.9 110 50.9
Oeu008316.1 Olea europaea HOM05D000510 ORTHO05D006942 8.3e-25 117.5 112 46.4
Psat7g214960 Pisum sativum HOM05D000510 ORTHO05D006942 8.3e-25 117.5 111 48.6
RcHm_v2.0_Chr4g0406691 Rosa chinensis HOM05D000510 ORTHO05D006942 1.1e-24 117.1 110 49.1
GSVIVG01010759001 Vitis vinifera HOM05D000510 ORTHO05D006942 1.1e-24 117.1 111 49.5
ClCG07G015670 Citrullus lanatus HOM05D000510 ORTHO05D006942 1.4e-24 116.7 110 48.2
Sed0016530 Sechium edule HOM05D000510 ORTHO05D006942 1.4e-24 116.7 110 47.3
Thecc.04G179600 Theobroma cacao HOM05D000510 ORTHO05D006942 1.4e-24 116.7 110 48.2
CANSAT78G1007 Cannabis sativa HOM05D000510 ORTHO05D006942 1.8e-24 116.3 111 46.8
Cc03_g12920 Coffea canephora HOM05D000510 ORTHO05D006942 1.8e-24 116.3 110 50.0
PGR083G2844 Punica granatum HOM05D000510 ORTHO05D006942 1.8e-24 116.3 111 48.6
CsaV3_4G003440 Cucumis sativus L. HOM05D000510 ORTHO05D006942 2.4e-24 115.9 110 47.3
ECA240G0569 Erigeron canadensis HOM05D000510 ORTHO05D006942 2.4e-24 115.9 112 47.3
Phvul.011G054300 Phaseolus vulgaris HOM05D000510 ORTHO05D006942 2.4e-24 115.9 110 50.0
Psat5g289200 Pisum sativum HOM05D000510 ORTHO05D006942 2.4e-24 115.9 112 44.6
Lj6C53G4 Lonicera japonica HOM05D000510 ORTHO05D006942 3.2e-24 115.5 111 49.5
AUR62015382 Chenopodium quinoa HOM05D000510 ORTHO05D006942 4.1e-24 115.2 110 50.0
Glyma.12G052300 Glycine max HOM05D000510 ORTHO05D006942 4.1e-24 115.2 110 49.1
TPR.G18847 Trifolium pratense HOM05D000510 ORTHO05D006942 4.1e-24 115.2 112 44.6
Ciclev10018759m.g Citrus clementina HOM05D000510 ORTHO05D006942 5.4e-24 114.8 110 48.2
Ah.15g099620 Amaranthus hybridus HOM05D000510 ORTHO05D006942 9.2e-24 114.0 110 49.1
Ca_20788_v3 Cicer arietinum L. HOM05D000510 ORTHO05D006942 9.2e-24 114.0 111 45.9
MELO3C017714.2 Cucumis melo HOM05D000510 ORTHO05D006942 9.2e-24 114.0 110 47.3
Duzib268G1091 Durio zibethinus HOM05D000510 ORTHO05D006942 9.2e-24 114.0 110 45.5
Lj3g0024373 Lotus japonicus HOM05D000510 ORTHO05D006942 9.2e-24 114.0 112 43.8
Medtr4g067230 Medicago truncatula HOM05D000510 ORTHO05D006942 9.2e-24 114.0 111 47.7
Zm00001eb406780 Zea mays HOM05D000510 ORTHO05D006942 9.2e-24 114.0 110 47.3
TPR.G34184 Trifolium pratense HOM05D000510 ORTHO05D006942 1.6e-23 113.2 110 48.2
FvH4_4g10810 Fragaria vesca HOM05D000510 ORTHO05D006942 2.0e-23 112.8 110 48.2
FAN07G1914 Fragaria x ananassa HOM05D000510 ORTHO05D006942 2.0e-23 112.8 110 48.2
FAN12G3624 Fragaria x ananassa HOM05D000510 ORTHO05D006942 2.0e-23 112.8 110 48.2
TWI63G1594 Tripterygium wilfordii HOM05D000510 ORTHO05D006942 2.0e-23 112.8 110 46.4
Oeu055655.1 Olea europaea HOM05D000510 ORTHO05D006942 2.7e-23 112.5 112 44.6
CSS0000147 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D006942 3.5e-23 112.1 117 49.6
CSS0036325 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D006942 3.5e-23 112.1 117 49.6
Oeu012284.1 Olea europaea HOM05D000510 ORTHO05D006942 3.5e-23 112.1 111 46.8
AUR62002308 Chenopodium quinoa HOM05D000510 ORTHO05D006942 4.6e-23 111.7 110 48.2
Prupe.1G194300 Prunus persica HOM05D000510 ORTHO05D006942 4.6e-23 111.7 98 52.0
HanXRQChr03g0091111 Helianthus annuus HOM05D000510 ORTHO05D006942 5.9e-23 111.3 112 45.5
Medtr2g098910 Medicago truncatula HOM05D000510 ORTHO05D006942 5.9e-23 111.3 112 43.8
Atru.chr3.1485 Acer truncatum HOM05D000510 ORTHO05D006942 1.0e-22 110.5 110 46.4
CiPaw.01G100000 Carya illinoinensis HOM05D000510 ORTHO05D006942 1.0e-22 110.5 110 46.4
FAN17G2837 Fragaria x ananassa HOM05D000510 ORTHO05D006942 1.0e-22 110.5 110 47.3
Ah.13g072870 Amaranthus hybridus HOM05D019857 ORTHO05D006942 1.3e-22 110.2 119 43.7
Glyma.13G344400 Glycine max HOM05D000510 ORTHO05D006942 1.3e-22 110.2 115 45.2
Gohir.A10G137500 Gossypium hirsutum HOM05D000510 ORTHO05D006942 1.3e-22 110.2 112 44.6
Sopen11g020450 Solanum pennellii HOM05D000510 ORTHO05D006942 1.3e-22 110.2 108 47.2
SGA_v2.0_scaffold58G20401 Striga asiatica HOM05D000510 ORTHO05D006942 1.3e-22 110.2 118 43.2
Peaxi162Scf00126g00012 Petunia axillaris HOM05D000510 ORTHO05D006942 2.9e-22 109.0 110 46.4
Phvul.005G153100 Phaseolus vulgaris HOM05D000510 ORTHO05D006942 2.9e-22 109.0 115 42.6
Sed0007298 Sechium edule HOM05D000510 ORTHO05D006942 2.9e-22 109.0 110 44.5
Nitab4.5_0002474g0030 Nicotiana tabacum HOM05D000510 ORTHO05D006942 3.9e-22 108.6 107 46.7
Solyc11g044940.1 Solanum lycopersicum HOM05D000510 ORTHO05D006942 3.9e-22 108.6 108 46.3
PGSC0003DMG400006667 Solanum tuberosum HOM05D000510 ORTHO05D006942 3.9e-22 108.6 108 46.3
VMungo1080G1377 Vigna mungo HOM05D000510 ORTHO05D006942 3.9e-22 108.6 115 42.6
Glyma.15G030000 Glycine max HOM05D000510 ORTHO05D006942 5.0e-22 108.2 113 46.0
Lsat_1_v5_gn_3_115521 Lactuca sativa HOM05D000510 ORTHO05D006942 5.0e-22 108.2 79 59.5
COL.COLO4_07666 Corchorus olitorius HOM05D000510 ORTHO05D006942 6.6e-22 107.8 112 42.9
CAN.G451.1 Capsicum annuum HOM05D000510 ORTHO05D006942 8.6e-22 107.5 111 46.8
Gohir.D10G129101 Gossypium hirsutum HOM05D000510 ORTHO05D006942 8.6e-22 107.5 112 43.8
Gorai.011G142500 Gossypium raimondii HOM05D000510 ORTHO05D006942 8.6e-22 107.5 112 43.8
Nitab4.5_0004047g0060 Nicotiana tabacum HOM05D000510 ORTHO05D006942 8.6e-22 107.5 107 46.7
THA.LOC104802310 Tarenaya hassleriana HOM05D000510 ORTHO05D006942 8.6e-22 107.5 110 44.5
THA.LOC104803720 Tarenaya hassleriana HOM05D000510 ORTHO05D006942 8.6e-22 107.5 106 46.2
MSTRG.27653 Avicennia marina HOM05D000510 ORTHO05D006942 1.1e-21 107.1 112 43.8
arahy.Tifrunner.gnm1.ann1.HN1IYU Arachis hypogaea HOM05D000510 ORTHO05D006942 1.5e-21 106.7 117 44.4
Ca_01257_v3 Cicer arietinum L. HOM05D000510 ORTHO05D006942 1.5e-21 106.7 114 44.7
arahy.Tifrunner.gnm1.ann1.Z5KWA0 Arachis hypogaea HOM05D000510 ORTHO05D006942 1.9e-21 106.3 117 44.4
SHI26082 Sapria himalayana HOM05D000510 ORTHO05D006942 2.5e-21 105.9 110 45.5
DCAR_028458 Daucus carota HOM05D000510 ORTHO05D006942 4.3e-21 105.1 110 47.3
Lalb_Chr24g0396841 Lupinus albus HOM05D000510 ORTHO05D006942 1.0e-19 100.5 114 44.7
Lalb_Chr14g0372471 Lupinus albus HOM05D000510 ORTHO05D006942 2.3e-19 99.4 113 42.5
AL5G41330 Arabidopsis lyrata HOM05D000510 ORTHO05D006942 3.1e-19 99.0 110 42.7
AT3G59420 Arabidopsis thaliana HOM05D000510 ORTHO05D006942 4.0e-19 98.6 110 42.7
CARHR169820 Cardamine hirsuta HOM05D000510 ORTHO05D006942 5.2e-19 98.2 110 41.8
A09p51700 Brassica napus HOM05D000510 ORTHO05D006942 8.9e-19 97.4 111 41.4
BraA09t40606Z Brassica rapa HOM05D000510 ORTHO05D006942 8.9e-19 97.4 111 41.4
Aa31LG1G25120 Aethionema arabicum HOM05D009929 ORTHO05D006942 2.6e-18 95.9 110 42.7
BcaC07g40283 Brassica carinata HOM05D000510 ORTHO05D006942 2.6e-18 95.9 111 41.4
C08p34430 Brassica napus HOM05D000510 ORTHO05D006942 2.6e-18 95.9 111 41.4
BolC8t51044H Brassica oleracea HOM05D000510 ORTHO05D006942 2.6e-18 95.9 111 41.4
Sp5g03720 Schrenkiella parvula HOM05D000510 ORTHO05D006942 2.6e-18 95.9 111 40.5
Thhalv10005780m.g Eutrema salsugineum HOM05D000510 ORTHO05D006942 5.8e-18 94.7 110 40.0
arahy.Tifrunner.gnm1.ann1.VC2WT3 Arachis hypogaea HOM05D000510 ORTHO05D006942 9.8e-18 94.0 119 42.9
Carub.0005s2616 Capsella rubella HOM05D000510 ORTHO05D006942 1.7e-17 93.2 110 39.1
Aa31LG10G13780 Aethionema arabicum HOM05D000510 ORTHO05D006942 1.6e-15 86.7 116 37.1
ATR1145G095 Amborella trichopoda HOM05D000510 ORTHO05D031064 2.0e-15 86.3 133 43.6
Mapoly0064s0097 Marchantia polymorpha HOM05D000510 ORTHO05D006942 3.0e-14 82.4 90 38.9
HPP92_023712 Vanilla planifolia HOM05D000510 ORTHO05D006942 1.5e-13 80.1 93 43.0
Manes.11G120900 Manihot esculenta HOM05D000510 ORTHO05D006942 2.8e-12 75.9 110 39.1
Rhsim02G0077100 Rhododendron simsii HOM05D000510 ORTHO05D006942 4.7e-12 75.1 111 39.6
unitig_26.g9999 Utricularia gibba HOM05D000510 ORTHO05D006942 1.8e-11 73.2 58 51.7
PSO017G6430 Papaver somniferum HOM05D000510 ORTHO05D006942 8.9e-11 70.9 111 38.7
PSO675G3025 Papaver somniferum HOM05D000510 ORTHO05D006942 8.9e-11 70.9 111 38.7
Pp3c6_19970 Physcomitrium patens HOM05D000510 ORTHO05D006942 2.4e-08 62.8 48 58.3
TPR.G21180 Trifolium pratense HOM05D000510 ORTHO05D001548 3.2e-08 62.4 85 36.5
Dinv44190 Davidia involucrata HOM05D000510 ORTHO05D006942 1.0e-06 57.4 62 43.5
Medtr3g464080 Medicago truncatula HOM05D000510 ORTHO05D001548 2.3e-06 56.2 85 40.0


User provided reference genes

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