Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 2.8e-54 214.9 102 100.0
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 5.3e-45 184.1 97 90.7
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 3.0e-40 168.3 97 81.4
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 8.8e-40 166.8 97 79.4
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 4.4e-39 164.5 94 78.7
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 7.5e-39 163.7 95 77.9
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 7.5e-39 163.7 94 79.8
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 2.8e-38 161.8 100 77.0
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 2.8e-38 161.8 95 78.9
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 1.1e-37 159.8 98 77.6
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 1.1e-37 159.8 94 77.7
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 1.2e-36 156.4 99 73.7
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 1.6e-36 156.0 94 79.8
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 2.7e-36 155.2 93 77.4
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 3.5e-36 154.8 98 76.5
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 3.5e-36 154.8 98 76.5
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 3.5e-36 154.8 98 76.5
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 3.5e-36 154.8 98 73.5
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 4.5e-36 154.5 95 78.9
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 7.7e-36 153.7 95 75.8
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 1.0e-35 153.3 94 75.5
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 1.0e-35 153.3 93 76.3
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 2.2e-35 152.1 99 75.8
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 2.9e-35 151.8 94 73.4
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 6.5e-35 150.6 94 72.3
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 3.2e-34 148.3 94 72.3
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 4.2e-34 147.9 94 75.5
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 4.2e-34 147.9 92 76.1
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 5.5e-34 147.5 99 74.7
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 7.2e-34 147.1 93 74.2
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 9.4e-34 146.7 98 71.4
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 9.4e-34 146.7 93 74.2
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 1.6e-33 146.0 92 75.0
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 2.1e-33 145.6 92 72.8
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 2.1e-33 145.6 92 72.8
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 2.7e-33 145.2 99 71.7
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 3.6e-33 144.8 92 72.8
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 3.6e-33 144.8 92 72.8
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 3.6e-33 144.8 93 73.1
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 3.6e-33 144.8 93 73.1
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 6.1e-33 144.1 80 86.2
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 8.0e-33 143.7 94 71.3
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 1.0e-32 143.3 97 68.0
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 1.4e-32 142.9 94 70.2
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 3.0e-32 141.7 97 69.1
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 3.0e-32 141.7 94 68.1
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 5.2e-32 141.0 95 71.6
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 5.2e-32 141.0 99 65.7
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 6.8e-32 140.6 94 70.2
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 6.8e-32 140.6 91 72.5
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 8.8e-32 140.2 97 71.1
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 1.2e-31 139.8 92 69.6
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 2.0e-31 139.0 94 67.0
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 2.0e-31 139.0 94 67.0
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 2.0e-31 139.0 94 67.0
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 2.0e-31 139.0 94 67.0
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 2.0e-31 139.0 94 67.0
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 2.6e-31 138.7 97 68.0
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 2.6e-31 138.7 97 68.0
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 2.6e-31 138.7 94 68.1
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 2.6e-31 138.7 97 71.1
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 3.4e-31 138.3 98 69.4
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 4.4e-31 137.9 97 70.1
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 4.4e-31 137.9 92 70.7
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 7.5e-31 137.1 97 67.0
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 9.8e-31 136.7 90 71.1
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 1.3e-30 136.3 92 69.6
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 1.7e-30 136.0 97 64.9
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 3.7e-30 134.8 97 63.9
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 1.1e-29 133.3 97 63.9
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 1.1e-29 133.3 92 70.7
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 3.1e-29 131.7 95 65.3
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 3.1e-29 131.7 134 52.2
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 4.1e-29 131.3 97 62.9
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 5.4e-29 131.0 144 48.6
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 9.1e-29 130.2 97 61.9
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 2.0e-28 129.0 97 64.9
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 2.7e-28 128.6 103 63.1
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 1.0e-27 126.7 84 70.2
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 2.3e-27 125.6 95 63.2
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 1.1e-26 123.2 95 65.3
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 5.5e-26 120.9 99 59.6
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 1.6e-25 119.4 97 67.0
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 2.8e-25 118.6 70 77.1
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.4e-24 116.3 87 67.8
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 2.3e-24 115.5 70 74.3
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 8.9e-24 113.6 94 55.3
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 7.5e-23 110.5 99 63.6
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 2.2e-22 109.0 70 72.9
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 2.8e-22 108.6 96 60.4
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 2.4e-21 105.5 63 76.2
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 4.1e-21 104.8 165 40.0
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 3.8e-19 98.2 69 71.0
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 3.8e-19 98.2 69 68.1
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 3.8e-19 98.2 69 66.7
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 8.6e-19 97.1 49 83.7
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 3.3e-18 95.1 94 54.3
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 1.8e-16 89.4 65 69.2
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 5.2e-16 87.8 49 77.6
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 6.8e-16 87.4 70 57.1
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 4.4e-15 84.7 69 63.8
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.7e-14 82.8 54 66.7
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 1.9e-10 69.3 65 58.5
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 2.8e-09 65.5 47 68.1
CAN.G792.73 Capsicum annuum HOM05D003118 ORTHO05D009308 1.2e-07 60.1 44 70.5
Haze_08759 Corylus avellana HOM05D007428 ORTHO05D009308 5.8e-07 57.8 30 80.0
Ca_08439_v3 Cicer arietinum L. HOM05D007428 ORTHO05D009308 9.8e-07 57.0 61 47.5


User provided reference genes

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