Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.0e-99 366.7 181 100.0
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.2e-68 263.5 134 94.0
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 1.0e-51 207.2 129 77.5
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 1.8e-51 206.5 120 82.5
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 1.8e-51 206.5 120 82.5
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 2.3e-51 206.1 118 83.1
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 6.8e-51 204.5 128 78.1
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 8.8e-51 204.1 120 81.7
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 8.8e-51 204.1 155 69.0
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 2.0e-50 203.0 128 77.3
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 3.4e-50 202.2 124 81.5
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 4.4e-50 201.8 119 82.4
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 5.7e-50 201.4 132 78.8
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 5.7e-50 201.4 124 81.5
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 7.5e-50 201.1 135 77.0
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 7.5e-50 201.1 118 78.8
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 7.5e-50 201.1 127 78.7
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 9.8e-50 200.7 133 78.2
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 9.8e-50 200.7 119 84.0
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 1.3e-49 200.3 132 77.3
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 1.7e-49 199.9 126 79.4
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 2.2e-49 199.5 125 76.8
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 2.2e-49 199.5 118 80.5
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 2.2e-49 199.5 142 70.4
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 2.8e-49 199.1 124 79.0
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 2.8e-49 199.1 127 78.7
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 3.7e-49 198.7 131 76.3
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 6.3e-49 198.0 119 82.4
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 8.3e-49 197.6 132 75.0
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 8.3e-49 197.6 134 70.9
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 8.3e-49 197.6 136 72.1
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 8.3e-49 197.6 128 76.6
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 8.3e-49 197.6 127 77.2
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 1.1e-48 197.2 124 79.0
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 1.1e-48 197.2 131 75.6
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 1.1e-48 197.2 134 70.9
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 1.1e-48 197.2 131 76.3
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 1.4e-48 196.8 130 75.4
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 1.4e-48 196.8 129 76.7
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 1.4e-48 196.8 158 65.2
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 1.8e-48 196.4 132 77.3
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 2.4e-48 196.1 128 76.6
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 2.4e-48 196.1 127 77.2
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 2.4e-48 196.1 128 74.2
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 4.1e-48 195.3 129 77.5
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 4.1e-48 195.3 131 73.3
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 4.1e-48 195.3 129 75.2
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 4.1e-48 195.3 119 80.7
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 5.4e-48 194.9 127 74.8
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 5.4e-48 194.9 139 68.3
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 5.4e-48 194.9 136 71.3
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 5.4e-48 194.9 106 88.7
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 5.4e-48 194.9 129 73.6
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 5.4e-48 194.9 106 85.8
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 5.4e-48 194.9 119 79.8
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 7.0e-48 194.5 106 88.7
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 7.0e-48 194.5 159 65.4
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 7.0e-48 194.5 130 73.1
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 7.0e-48 194.5 120 80.0
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 9.1e-48 194.1 140 68.6
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 9.1e-48 194.1 142 66.9
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 9.1e-48 194.1 142 66.9
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 9.1e-48 194.1 142 66.9
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 9.1e-48 194.1 127 77.2
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 9.1e-48 194.1 148 66.2
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 9.1e-48 194.1 137 67.9
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 9.1e-48 194.1 106 86.8
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.2e-47 193.7 172 61.0
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.2e-47 193.7 125 75.2
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.2e-47 193.7 125 75.2
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.2e-47 193.7 125 75.2
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.2e-47 193.7 125 75.2
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 1.2e-47 193.7 130 73.1
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.2e-47 193.7 106 85.8
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 1.2e-47 193.7 127 75.6
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 1.6e-47 193.4 126 74.6
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 1.6e-47 193.4 106 86.8
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 1.6e-47 193.4 125 75.2
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 1.6e-47 193.4 131 71.0
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 2.0e-47 193.0 126 74.6
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 2.0e-47 193.0 137 69.3
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 2.0e-47 193.0 129 75.2
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 2.7e-47 192.6 140 67.1
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 2.7e-47 192.6 134 69.4
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 2.7e-47 192.6 126 74.6
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 2.7e-47 192.6 131 74.0
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 3.5e-47 192.2 112 82.1
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 4.5e-47 191.8 141 68.8
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 4.5e-47 191.8 127 74.0
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 7.7e-47 191.0 186 54.3
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 7.7e-47 191.0 140 67.1
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 7.7e-47 191.0 127 75.6
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 7.7e-47 191.0 106 85.8
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 7.7e-47 191.0 138 68.1
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 7.7e-47 191.0 133 72.9
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 1.0e-46 190.7 134 68.7
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 1.0e-46 190.7 134 68.7
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 1.0e-46 190.7 128 73.4
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.3e-46 190.3 138 66.7
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 1.3e-46 190.3 138 66.7
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 1.3e-46 190.3 106 85.8
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 1.7e-46 189.9 166 58.4
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 2.9e-46 189.1 128 77.3
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 2.9e-46 189.1 127 72.4
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 2.9e-46 189.1 130 72.3
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 2.9e-46 189.1 132 71.2
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 3.8e-46 188.7 121 75.2
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 3.8e-46 188.7 135 67.4
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 3.8e-46 188.7 106 84.0
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 5.0e-46 188.3 108 81.5
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 6.6e-46 188.0 106 84.0
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 8.6e-46 187.6 130 70.0
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 8.6e-46 187.6 106 81.1
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 1.1e-45 187.2 106 83.0
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 1.5e-45 186.8 141 67.4
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.5e-45 186.0 106 82.1
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 2.5e-45 186.0 154 63.0
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 5.5e-45 184.9 126 72.2
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 1.2e-44 183.7 106 83.0
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 1.2e-44 183.7 127 74.0
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 1.2e-44 183.7 138 68.1
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 2.8e-44 182.6 159 61.0
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 2.8e-44 182.6 139 65.5
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 1.8e-43 179.9 106 83.0
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 3.0e-43 179.1 106 78.3
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 2.6e-42 176.0 108 75.0
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 4.4e-42 175.3 106 78.3
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 7.5e-42 174.5 106 80.2
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 1.3e-41 173.7 106 79.2
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.1e-40 169.1 173 54.9
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 5.0e-38 161.8 146 57.5
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 8.6e-38 161.0 106 71.7
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 1.5e-37 160.2 125 63.2
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 3.3e-37 159.1 109 73.4
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 3.6e-36 155.6 124 65.3
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 6.1e-36 154.8 151 53.6
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 1.4e-32 143.7 114 64.9
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 3.5e-31 139.0 74 86.5
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 6.6e-30 134.8 171 48.0
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 1.8e-27 126.7 133 53.4
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 4.4e-26 122.1 70 80.0
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 5.8e-26 121.7 74 77.0
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 1.1e-24 117.5 106 46.2
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.1e-24 117.5 69 78.3
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 1.1e-24 117.5 66 84.8
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 1.4e-24 117.1 66 80.3
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.2e-24 115.9 69 75.4
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 4.6e-23 112.1 68 75.0
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 4.6e-23 112.1 123 51.2
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 1.0e-22 110.9 127 50.4
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.3e-22 110.5 68 73.5
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 3.3e-21 105.9 53 90.6
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 1.7e-17 93.6 128 42.2
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 8.3e-17 91.3 98 45.9
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 5.4e-16 88.6 110 43.6
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 9.2e-16 87.8 53 83.0
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 4.6e-15 85.5 155 34.8
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.1e-11 74.3 62 59.7
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 8.9e-11 71.2 40 82.5
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 2.0e-10 70.1 44 77.3
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 2.9e-09 66.2 55 60.0
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 8.4e-09 64.7 36 86.1
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 8.4e-09 64.7 37 81.1
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 1.9e-08 63.5 87 41.4
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.2e-08 62.8 40 75.0
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 4.2e-08 62.4 30 90.0
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 1.2e-07 60.8 30 86.7
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 3.5e-07 59.3 29 86.2
ATR0661G512 Amborella trichopoda HOM05D004634 ORTHO05D005502 1.3e-06 57.4 44 75.0
Rhsim08G0128300 Rhododendron simsii HOM05D004138 ORTHO05D339665 2.3e-06 56.6 32 71.9
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 5.1e-06 55.5 42 66.7


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