Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0660G011 Amborella trichopoda HOM05D003467 ORTHO05D004220 2.4e-96 355.5 183 100.0
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 1.5e-45 186.8 129 76.7
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 2.8e-44 182.6 120 80.8
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 4.7e-44 181.8 123 77.2
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 6.2e-44 181.4 126 79.4
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-43 180.3 116 81.9
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 4.0e-43 178.7 111 82.9
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 5.2e-43 178.3 111 83.8
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 6.9e-43 177.9 111 83.8
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 6.9e-43 177.9 111 83.8
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 9.0e-43 177.6 129 75.2
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 1.5e-42 176.8 111 83.8
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-42 176.8 116 80.2
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-42 176.8 111 82.9
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 5.8e-42 174.9 111 82.9
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 5.8e-42 174.9 128 75.8
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 6.4e-41 171.4 159 64.8
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 6.4e-41 171.4 159 64.8
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 2.4e-40 169.5 111 81.1
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-40 169.5 123 75.6
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 4.2e-40 168.7 111 80.2
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 7.1e-40 167.9 118 78.0
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 7.1e-40 167.9 111 80.2
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-40 167.5 123 74.0
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 1.2e-39 167.2 148 66.9
SHI44577 Sapria himalayana HOM05D003467 ORTHO05D004220 4.6e-39 165.2 117 75.2
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-38 163.7 103 82.5
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-38 163.3 104 81.7
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 3.9e-38 162.2 122 72.1
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 5.1e-38 161.8 122 71.3
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 2.5e-37 159.5 111 77.5
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 3.3e-37 159.1 122 70.5
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 3.3e-37 159.1 122 70.5
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 3.3e-37 159.1 113 76.1
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 3.3e-37 159.1 113 76.1
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 3.3e-37 159.1 113 76.1
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 3.3e-37 159.1 113 76.1
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 3.3e-37 159.1 113 76.1
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 9.6e-37 157.5 115 73.9
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 2.8e-36 156.0 122 69.7
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 2.8e-36 156.0 117 74.4
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 1.1e-35 154.1 121 71.1
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 1.1e-35 154.1 112 77.7
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-35 152.9 116 74.1
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 1.5e-34 150.2 113 74.3
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 2.6e-34 149.4 113 73.5
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 5.8e-34 148.3 105 74.3
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 7.6e-34 147.9 93 81.7
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 7.6e-34 147.9 93 81.7
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 9.9e-34 147.5 95 81.1
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.9e-33 145.2 116 69.0
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 7.1e-32 141.4 111 69.4
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-32 141.0 105 71.4
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 3.5e-31 139.0 95 76.8
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 6.0e-31 138.3 134 61.2
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 7.9e-31 137.9 85 82.4
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.3e-30 137.1 113 69.0
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 2.5e-29 132.9 135 57.0
SHI43969 Sapria himalayana HOM05D003467 ORTHO05D004220 3.3e-29 132.5 90 75.6
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-28 130.2 89 76.4
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 6.2e-28 128.3 112 65.2
SHI42502 Sapria himalayana HOM05D003467 ORTHO05D004220 5.3e-27 125.2 97 69.1
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 1.2e-26 124.0 106 63.2
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 1.2e-26 124.0 116 57.8
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 3.4e-26 122.5 86 73.3
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 7.6e-26 121.3 111 64.0
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 3.8e-25 119.0 98 66.3
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 2.4e-24 116.3 90 71.1
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 8.7e-22 107.8 69 79.7
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 1.3e-20 104.0 107 50.5
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 3.7e-20 102.4 109 55.0
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 3.7e-20 102.4 109 55.0
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 3.7e-20 102.4 109 55.0
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 6.9e-19 98.2 69 73.9
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 9.0e-19 97.8 78 65.4
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 9.0e-19 97.8 112 54.5
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 1.2e-18 97.4 102 55.9
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 1.2e-18 97.4 98 55.1
SGA_v2.0_scaffold361G49910 Striga asiatica HOM05D003467 ORTHO05D004220 1.2e-18 97.4 59 83.1
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 1.5e-18 97.1 109 56.9
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-18 96.7 71 70.4
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 2.6e-18 96.3 102 51.0
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 2.6e-18 96.3 68 72.1
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 1.3e-17 94.0 106 52.8
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-17 92.8 63 76.2
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 8.4e-17 91.3 109 51.4
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 1.4e-16 90.5 107 47.7
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 1.9e-16 90.1 70 67.1
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 3.2e-16 89.4 65 72.3
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 4.2e-16 89.0 90 62.2
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 4.2e-16 89.0 110 47.3
Lsat_1_v5_gn_5_163900 Lactuca sativa HOM05D003467 ORTHO05D004220 1.6e-15 87.0 124 41.9
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 2.7e-15 86.3 98 52.0
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.5e-15 85.9 85 57.6
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 1.0e-14 84.3 64 68.8
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-14 84.0 107 44.9
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 1.8e-14 83.6 106 44.3
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 3.0e-14 82.8 176 35.8
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 8.7e-14 81.3 44 86.4
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 1.1e-13 80.9 76 65.8
Lsat_1_v5_gn_3_81380 Lactuca sativa HOM05D003467 ORTHO05D004220 1.1e-13 80.9 108 45.4
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 1.9e-13 80.1 73 63.0
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 1.9e-13 80.1 73 63.0
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 2.5e-13 79.7 113 49.6
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 7.4e-13 78.2 57 73.7
Lsat_1_v5_gn_1_70701 Lactuca sativa HOM05D003467 ORTHO05D004220 9.7e-13 77.8 83 50.6
Lsat_1_v5_gn_7_5320 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-12 77.4 76 50.0
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.3e-12 77.4 86 55.8
Solyc02g092280.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.6e-12 77.0 64 64.1
Lsat_1_v5_gn_4_83901 Lactuca sativa HOM05D003467 ORTHO05D004220 4.8e-12 75.5 149 35.6
Lsat_1_v5_gn_3_78181 Lactuca sativa HOM05D003467 ORTHO05D004220 1.4e-11 73.9 61 55.7
Psat3g204920 Pisum sativum HOM05D003467 ORTHO05D004220 1.8e-11 73.6 58 69.0
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 2.4e-11 73.2 92 47.8
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 3.1e-11 72.8 84 50.0
Medtr7g007070 Medicago truncatula HOM05D003467 ORTHO05D004220 4.1e-11 72.4 45 80.0
Phvul.008G005400 Phaseolus vulgaris HOM05D003467 ORTHO05D004220 4.1e-11 72.4 86 50.0
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 1.2e-10 70.9 45 77.8
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 1.5e-10 70.5 55 65.5
SEGI_40930 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 2.0e-10 70.1 82 50.0
Lsat_1_v5_gn_9_41861 Lactuca sativa HOM05D003467 ORTHO05D004220 7.7e-10 68.2 43 72.1
Lj1g0022622 Lotus japonicus HOM05D003467 ORTHO05D004220 7.7e-10 68.2 45 71.1
VMungo1383G2739 Vigna mungo HOM05D003467 ORTHO05D004220 1.7e-09 67.0 90 47.8
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 2.9e-09 66.2 84 45.2
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 3.8e-09 65.9 80 46.2
Lsat_1_v5_gn_4_71160 Lactuca sativa HOM05D003467 ORTHO05D004220 6.5e-09 65.1 63 49.2
SHI34617 Sapria himalayana HOM05D003467 ORTHO05D004220 8.5e-09 64.7 38 86.8
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 3.2e-08 62.8 82 53.7
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.5e-08 62.0 80 51.2
Lsat_1_v5_gn_3_11941 Lactuca sativa HOM05D003467 ORTHO05D004220 7.2e-08 61.6 97 40.2
SHI04750 Sapria himalayana HOM05D000330 ORTHO05D000209 1.2e-07 60.8 77 48.1
unitig_22.g5752 Utricularia gibba HOM05D003467 ORTHO05D004220 1.2e-07 60.8 67 52.2
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.1e-07 60.1 47 66.0
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 3.6e-07 59.3 74 52.7
SalBow1G7440 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.1e-06 55.5 33 81.8
SalBow1G8430 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.1e-06 55.5 33 81.8
SalBow3G0400 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.1e-06 55.5 33 81.8
SalBow5G0161 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.1e-06 55.5 33 81.8
SalBow6G1894 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.1e-06 55.5 33 81.8
SalBow8G0101 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.1e-06 55.5 33 81.8
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 8.8e-06 54.7 56 57.1


User provided reference genes

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