Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 0.0e+00 1291.2 658 100.0
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 7.7e-161 571.6 602 50.2
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.1e-154 551.2 626 47.6
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 6.3e-147 525.4 618 45.8
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 3.6e-142 509.6 637 45.8
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 4.7e-142 509.2 622 46.0
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 1.4e-141 507.7 599 45.2
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 2.2e-139 500.4 600 44.3
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 3.7e-139 499.6 609 45.2
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 4.8e-139 499.2 615 45.0
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 3.1e-138 496.5 606 44.2
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.6e-137 494.2 681 42.9
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 3.8e-136 489.6 613 43.1
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 8.5e-136 488.4 613 43.1
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.1e-135 488.0 619 43.3
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.5e-135 487.6 618 43.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 1.9e-135 487.3 601 44.3
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.9e-135 487.3 601 43.4
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 4.2e-135 486.1 599 42.9
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.7e-131 474.2 606 44.1
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 2.2e-131 473.8 600 41.8
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 2.8e-131 473.4 609 42.5
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.8e-130 470.7 616 43.7
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 3.1e-130 469.9 606 40.8
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 7.0e-130 468.8 603 43.8
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 7.0e-130 468.8 606 42.9
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 9.1e-130 468.4 583 44.6
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.6e-129 467.6 603 43.8
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 2.0e-129 467.2 606 40.4
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.3e-128 464.5 612 41.7
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 1.7e-128 464.2 587 44.6
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.9e-128 463.4 602 42.7
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 5.0e-128 462.6 579 43.7
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 6.5e-128 462.2 560 44.6
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.5e-127 461.1 590 43.1
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 3.2e-127 459.9 603 42.3
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 7.2e-127 458.8 600 42.8
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.2e-126 458.0 577 44.2
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.7e-126 456.1 600 42.7
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 6.1e-126 455.7 655 41.5
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 1.0e-125 454.9 610 42.8
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 3.0e-125 453.4 602 41.7
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 7.5e-124 448.7 616 40.3
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 9.8e-124 448.4 598 41.6
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.3e-123 448.0 624 39.7
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 1.3e-123 448.0 581 42.9
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 2.2e-123 447.2 603 40.5
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 1.8e-122 444.1 602 42.0
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 5.4e-122 442.6 616 39.8
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 5.4e-122 442.6 605 41.7
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 5.4e-122 442.6 581 43.2
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 9.2e-122 441.8 602 41.4
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.6e-121 441.0 623 39.8
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 1.0e-120 438.3 660 39.5
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.5e-119 433.7 596 40.3
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 7.3e-119 432.2 599 39.9
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 3.7e-115 419.9 613 40.1
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 7.0e-114 415.6 663 37.9
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 1.2e-113 414.8 608 40.0
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 5.9e-113 412.5 618 38.8
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 5.0e-112 409.5 569 41.8
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.1e-111 408.3 705 35.6
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.5e-111 407.9 581 39.9
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 1.9e-111 407.5 607 38.7
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 4.3e-111 406.4 622 40.4
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 4.7e-110 402.9 617 38.2
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 6.8e-109 399.1 630 39.0
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 2.4e-106 390.6 599 38.4
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 1.0e-104 385.2 606 37.5
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 3.0e-104 383.6 606 38.3
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.9e-103 380.9 532 41.5
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 2.8e-102 377.1 537 40.8
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 4.7e-102 376.3 606 38.0
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 4.0e-101 373.2 605 36.9
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 4.4e-100 369.8 577 36.9
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 4.4e-100 369.8 550 38.7
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 6.4e-99 365.9 484 44.0
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 8.3e-99 365.5 613 36.1
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 4.6e-97 359.8 613 35.6
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 5.1e-96 356.3 651 34.9
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 1.1e-95 355.1 504 41.3
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.2e-94 351.7 552 38.0
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 5.2e-93 346.3 626 35.6
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 8.4e-91 339.0 605 35.0
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 6.6e-88 329.3 369 47.2
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.1e-86 324.3 369 46.3
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 2.8e-86 323.9 502 39.6
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.4e-84 317.0 369 46.6
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.9e-83 313.9 424 41.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 8.4e-83 312.4 669 31.2
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 2.7e-81 307.4 586 33.1
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 3.9e-80 303.5 414 42.5
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.4e-77 294.3 653 31.4
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.4e-76 290.4 369 43.6
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 8.4e-75 285.8 395 39.7
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 2.8e-70 270.8 588 32.3
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 2.8e-70 270.8 450 35.8
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.2e-65 255.4 356 40.7
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 1.8e-64 251.5 556 31.3
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 3.0e-56 224.2 275 44.7
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 6.3e-54 216.5 289 43.9
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.2e-44 185.7 496 28.2
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 7.7e-44 183.0 311 35.4
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.0e-43 182.6 611 28.3
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.7e-43 181.8 656 26.5
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 2.9e-43 181.0 561 26.6
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 5.5e-42 176.8 464 28.9
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.8e-37 161.8 277 35.4
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.5e-36 158.7 582 26.5
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.2e-28 132.5 161 44.1
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 1.6e-28 132.1 162 43.2
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.2e-24 117.1 89 58.4
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 2.5e-18 98.2 150 34.7
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 2.0e-15 88.6 202 31.7
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 2.0e-12 78.6 100 50.0
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 9.5e-10 69.7 73 46.6
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 7.5e-07 60.1 117 32.5
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 2.8e-06 58.2 62 43.5
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.8e-06 58.2 75 38.7
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 6.3e-06 57.0 128 31.2


User provided reference genes

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