Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 3.0e-226 788.1 376 100.0
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 3.3e-100 369.4 277 59.2
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 2.1e-99 366.7 277 58.5
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 4.8e-99 365.5 361 47.1
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 6.2e-99 365.2 296 56.1
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.1e-98 364.4 286 57.7
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 8.4e-96 354.8 286 53.5
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 5.5e-95 352.1 272 57.7
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 4.3e-92 342.4 282 53.5
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 6.2e-91 338.6 279 52.7
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 9.0e-90 334.7 286 52.8
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.2e-89 334.3 295 51.2
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 3.4e-89 332.8 286 51.0
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 7.6e-89 331.6 288 52.8
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 2.9e-88 329.7 288 50.3
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 8.4e-88 328.2 311 48.6
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 1.4e-87 327.4 272 52.9
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.4e-87 327.4 292 50.0
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.9e-87 327.0 281 52.0
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.5e-87 326.6 281 52.0
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 3.2e-87 326.2 286 50.0
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 5.5e-87 325.5 281 50.5
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 1.6e-86 323.9 286 50.0
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.6e-86 323.9 279 51.3
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 1.6e-86 323.9 279 51.3
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 6.0e-86 322.0 301 47.8
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 7.9e-86 321.6 293 50.2
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 7.9e-86 321.6 293 50.2
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 7.9e-86 321.6 272 53.3
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.0e-85 321.2 287 50.2
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 1.0e-85 321.2 281 50.2
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.8e-85 320.5 292 50.3
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.8e-85 320.5 290 49.3
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 2.3e-85 320.1 298 49.0
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.0e-85 319.7 286 49.7
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 1.5e-84 317.4 290 49.0
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 1.5e-84 317.4 279 52.0
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.9e-84 317.0 292 49.0
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 2.5e-84 316.6 291 48.8
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 5.7e-84 315.5 284 50.7
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 5.7e-84 315.5 281 50.5
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 5.7e-84 315.5 286 50.7
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 1.6e-83 313.9 265 53.2
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 3.7e-83 312.8 284 49.6
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 3.7e-83 312.8 276 51.8
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 4.8e-83 312.4 277 50.2
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 6.9e-82 308.5 287 48.4
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 4.5e-81 305.8 269 52.0
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 1.7e-80 303.9 265 49.1
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 4.2e-79 299.3 363 38.3
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 7.2e-79 298.5 363 40.2
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 2.3e-77 293.5 289 47.1
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 5.7e-76 288.9 288 46.9
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 1.6e-75 287.3 373 38.6
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 6.3e-75 285.4 231 54.5
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 8.2e-75 285.0 238 53.4
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 7.7e-73 278.5 286 46.5
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 2.9e-72 276.6 274 47.4
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 8.5e-72 275.0 272 46.3
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 7.9e-70 268.5 271 48.3
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 3.9e-69 266.2 229 50.2
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 5.3e-66 255.8 270 43.7
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.7e-62 243.4 310 39.4
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 5.1e-61 239.2 211 51.2
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 6.3e-59 232.3 243 46.1
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 2.4e-58 230.3 217 48.8
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 2.6e-57 226.9 223 47.5
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 2.2e-56 223.8 306 38.6
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 8.8e-53 211.8 210 46.2
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.6e-49 201.1 211 47.4
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 2.5e-47 193.7 364 32.1
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 4.7e-46 189.5 226 42.0
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 3.0e-45 186.8 213 40.4
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 8.0e-38 162.2 230 39.1
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 9.5e-31 138.7 102 59.8
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.4e-26 124.8 102 56.9
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 3.0e-24 117.1 368 24.5
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 4.3e-23 113.2 132 37.9
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 3.1e-21 107.1 64 68.8
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 3.9e-16 90.1 58 69.0
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 3.2e-10 70.5 59 54.2


User provided reference genes

Program Settings