Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 3.4e-142 508.4 279 100.0
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 1.8e-82 310.1 278 64.7
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 1.1e-81 307.4 278 60.8
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 1.9e-81 306.6 274 63.9
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 2.5e-81 306.2 287 60.3
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 3.3e-81 305.8 287 60.3
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 3.3e-81 305.8 262 61.5
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 5.7e-81 305.1 268 61.2
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 9.7e-81 304.3 264 62.1
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 3.1e-79 299.3 278 61.2
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 4.1e-79 298.9 274 60.9
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 5.3e-79 298.5 261 63.6
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 1.2e-78 297.4 278 61.2
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 1.0e-77 294.3 284 58.5
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 3.8e-77 292.4 285 58.6
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 6.5e-77 291.6 277 61.0
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 1.9e-76 290.0 271 60.9
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 2.5e-76 289.7 286 61.2
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 2.1e-75 286.6 289 60.9
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 3.0e-74 282.7 275 57.8
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 9.7e-73 277.7 247 61.1
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 1.7e-72 276.9 286 55.2
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 3.7e-72 275.8 275 60.0
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 4.8e-72 275.4 261 62.5
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 8.2e-72 274.6 261 60.5
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 1.4e-71 273.9 266 60.9
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 1.8e-71 273.5 278 59.0
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 3.1e-71 272.7 280 60.0
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 3.1e-71 272.7 261 61.3
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 9.1e-71 271.2 278 59.7
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 9.1e-71 271.2 292 56.2
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 1.5e-70 270.4 259 56.8
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 3.4e-70 269.2 283 57.2
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 3.4e-70 269.2 292 55.8
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 4.5e-70 268.9 266 59.4
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 1.0e-69 267.7 278 55.8
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 1.7e-69 266.9 263 59.7
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 1.7e-69 266.9 287 56.8
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 1.7e-69 266.9 262 58.8
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 2.2e-69 266.5 262 59.5
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 5.0e-69 265.4 263 59.7
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 5.0e-69 265.4 264 59.1
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 5.0e-69 265.4 281 57.7
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 5.0e-69 265.4 281 57.7
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 5.0e-69 265.4 290 54.8
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 5.0e-69 265.4 279 56.6
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 6.5e-69 265.0 261 54.8
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 8.5e-69 264.6 287 56.8
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 8.5e-69 264.6 261 61.7
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 8.5e-69 264.6 261 61.3
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 8.5e-69 264.6 278 59.7
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 2.5e-68 263.1 282 57.1
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 3.2e-68 262.7 264 58.7
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.2e-68 262.7 250 62.4
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 4.2e-68 262.3 269 55.4
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 4.2e-68 262.3 282 57.1
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 4.2e-68 262.3 277 56.0
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 5.5e-68 261.9 261 57.5
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 9.4e-68 261.2 292 54.5
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 9.4e-68 261.2 291 54.3
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 1.2e-67 260.8 277 55.2
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 1.6e-67 260.4 281 56.6
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 2.1e-67 260.0 284 52.8
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 3.6e-67 259.2 286 54.2
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 4.7e-67 258.8 282 58.9
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 7.9e-67 258.1 266 57.9
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 1.4e-66 257.3 279 57.7
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 1.4e-66 257.3 282 55.3
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 1.8e-66 256.9 264 58.0
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 1.8e-66 256.9 282 56.4
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 1.8e-66 256.9 262 53.1
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 2.3e-66 256.5 277 55.6
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 3.0e-66 256.1 263 56.3
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.9e-66 255.8 246 61.8
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 3.9e-66 255.8 282 58.2
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.2e-66 255.4 246 61.8
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 5.2e-66 255.4 263 58.2
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 8.8e-66 254.6 246 61.8
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.1e-65 254.2 246 61.4
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 1.5e-65 253.8 281 55.2
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 1.5e-65 253.8 282 57.8
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 1.5e-65 253.8 279 55.9
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 1.5e-65 253.8 263 59.3
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 2.0e-65 253.4 221 62.4
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 2.0e-65 253.4 281 55.2
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 3.3e-65 252.7 279 53.0
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 4.4e-65 252.3 290 53.1
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 5.7e-65 251.9 249 55.4
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 5.7e-65 251.9 265 54.0
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 9.7e-65 251.1 287 53.7
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 2.2e-64 250.0 277 52.3
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 2.8e-64 249.6 263 57.4
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 4.8e-64 248.8 280 55.4
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 4.8e-64 248.8 280 55.4
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 4.8e-64 248.8 280 55.4
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 1.4e-63 247.3 283 55.1
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 1.4e-63 247.3 280 53.6
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 7.0e-63 245.0 281 56.9
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 9.1e-63 244.6 269 54.6
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 1.2e-62 244.2 269 55.8
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 1.2e-62 244.2 261 55.6
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 2.0e-62 243.4 286 56.6
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 2.6e-62 243.0 287 51.6
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 4.5e-62 242.3 254 58.7
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 1.0e-61 241.1 277 52.0
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 1.3e-61 240.7 282 56.4
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.7e-61 240.4 279 56.3
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 1.7e-61 240.4 279 55.2
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 5.0e-61 238.8 274 53.6
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 5.0e-61 238.8 278 53.6
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 1.1e-60 237.7 285 52.6
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 1.1e-60 237.7 275 52.0
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 2.5e-60 236.5 268 51.5
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.1e-59 233.4 261 55.2
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 1.2e-57 227.6 239 56.5
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 3.3e-57 226.1 279 53.0
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 1.3e-56 224.2 198 66.7
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 3.1e-55 219.5 280 48.9
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 5.3e-55 218.8 276 52.5
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 7.0e-55 218.4 283 50.9
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 7.0e-55 218.4 281 52.3
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 2.7e-54 216.5 283 50.5
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 3.5e-54 216.1 254 54.7
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 4.5e-54 215.7 262 53.4
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 1.7e-53 213.8 281 50.9
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 5.0e-53 212.2 272 50.4
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 8.5e-53 211.5 280 51.1
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 1.1e-52 211.1 273 49.8
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 1.5e-52 210.7 277 49.1
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 2.5e-52 209.9 256 50.0
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.2e-51 207.6 191 63.4
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 1.6e-51 207.2 264 47.7
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 8.8e-50 201.4 288 47.2
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 7.5e-49 198.4 277 49.8
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 4.8e-48 195.7 284 49.3
Mapoly0140s0011 Marchantia polymorpha HOM05D003921 ORTHO05D004394 3.1e-47 193.0 267 47.2
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 4.1e-47 192.6 215 55.8
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 1.0e-42 177.9 193 58.5
CBR_g18581 Chara braunii HOM05D001161 ORTHO05D000497 1.0e-42 177.9 256 48.8
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.4e-42 177.6 284 44.4
Nn1g08099 Nelumbo nucifera HOM05D003921 ORTHO05D004394 3.1e-39 166.4 136 62.5
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 9.2e-39 164.9 247 45.3
HPP92_008700 Vanilla planifolia HOM05D003921 ORTHO05D004394 1.6e-38 164.1 190 55.8
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis HOM05D003921 ORTHO05D004394 5.9e-38 162.2 323 38.4
Ah.06g188070 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.9e-36 157.1 183 55.7
MSTRG.14093 Avicennia marina HOM05D003921 ORTHO05D004394 4.7e-35 152.5 167 52.1
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 3.0e-34 149.8 166 54.8
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 6.8e-34 148.7 167 53.9
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 6.8e-34 148.7 167 53.9
PRCOL_00003036 Prasinoderma coloniale HOM05D003921 ORTHO05D004394 9.8e-33 144.8 254 37.8
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.8e-31 140.6 187 56.1
BcaC09g49189 Brassica carinata HOM05D003921 ORTHO05D004394 4.1e-31 139.4 167 52.1
DCAR_018123 Daucus carota HOM05D003921 ORTHO05D004394 9.2e-31 138.3 277 40.8
Nn1g01220 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.6e-30 137.5 137 57.7
Cre07.g351750 Chlamydomonas reinhardtii HOM05D003921 ORTHO05D004394 4.6e-30 136.0 254 39.4
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 4.6e-30 136.0 301 39.9
Eucgr.K01460 Eucalyptus grandis HOM05D003921 ORTHO05D004394 1.0e-29 134.8 136 52.9
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 1.0e-29 134.8 282 39.7
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 7.3e-28 128.6 190 52.1
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 6.2e-27 125.6 121 55.4
MCO16G303 Micromonas commoda HOM05D003921 ORTHO05D004394 7.5e-25 118.6 208 38.9
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 1.0e-21 108.2 282 34.0
Nn4g26407 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.3e-21 107.8 170 43.5
Actinidia25037 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.7e-21 107.5 101 54.5
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 3.6e-19 99.8 264 31.1
Actinidia13554 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.8e-18 97.4 71 66.2
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 2.3e-18 97.1 203 37.4
Nn4g26401 Nelumbo nucifera HOM05D003921 ORTHO05D004394 4.4e-17 92.8 74 62.2
Actinidia39598 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.6e-14 84.3 69 53.6
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 8.6e-13 78.6 99 52.5
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.5e-12 77.8 87 59.8
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 4.3e-12 76.3 147 39.5
CDE08G0595 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 5.6e-12 75.9 109 46.8
Dinv10307 Davidia involucrata HOM05D003921 ORTHO05D004394 4.7e-11 72.8 48 72.9
Gohir.D12G264333 Gossypium hirsutum HOM05D003921 ORTHO05D004394 4.7e-11 72.8 274 28.1
Ah.06g188080 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.0e-09 67.4 92 45.7
FvH4_1g22470 Fragaria vesca HOM05D003475 ORTHO05D035452 1.3e-08 64.7 60 55.0
Oeu039213.1 Olea europaea HOM05D003921 ORTHO05D004394 3.8e-08 63.2 59 62.7
Gorai.008G283700 Gossypium raimondii HOM05D003921 ORTHO05D004394 2.4e-07 60.5 274 28.1


User provided reference genes

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