Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G134 Amborella trichopoda HOM05D000575 ORTHO05D066204 1.8e-66 255.8 126 100.0
ATR1096G107 Amborella trichopoda HOM05D000575 ORTHO05D019549 9.8e-49 196.8 112 92.0
ATR1134G042 Amborella trichopoda HOM05D000575 ORTHO05D003840 6.4e-48 194.1 112 89.3
ATR0059G038 Amborella trichopoda HOM05D000575 ORTHO05D019549 1.1e-42 176.8 112 83.0
ATR0776G009 Amborella trichopoda HOM05D000575 ORTHO05D019549 1.4e-15 86.7 53 79.2
Sc07g0004920 Simmondsia chinensis HOM05D000575 ORTHO05D003840 9.3e-15 84.0 119 47.1
Medtr2g006570 Medicago truncatula HOM05D000575 ORTHO05D003840 1.5e-12 76.6 117 40.2
Psat1g222040 Pisum sativum HOM05D000575 ORTHO05D003840 1.5e-12 76.6 117 44.4
TAR624G0938 Trochodendron aralioides HOM05D000575 ORTHO05D019549 3.3e-12 75.5 114 46.5
AUR62014257 Chenopodium quinoa HOM05D000575 ORTHO05D003840 5.6e-12 74.7 147 41.5
Atru.chr13.1304 Acer truncatum HOM05D000575 ORTHO05D003840 9.6e-12 73.9 125 42.4
Sed0004329 Sechium edule HOM05D000575 ORTHO05D003840 9.6e-12 73.9 108 45.4
Dinv24299 Davidia involucrata HOM05D000575 ORTHO05D003840 1.6e-11 73.2 114 46.5
Dinv19384 Davidia involucrata HOM05D000575 ORTHO05D003840 2.1e-11 72.8 113 45.1
TAR628G1591 Trochodendron aralioides HOM05D000575 ORTHO05D003840 2.8e-11 72.4 105 50.5
Nn5g27933 Nelumbo nucifera HOM05D000575 ORTHO05D003840 4.8e-11 71.6 120 44.2
CSS0050050 Camellia sinensis var. sinensis HOM05D000575 ORTHO05D003840 6.2e-11 71.2 123 43.9
arahy.Tifrunner.gnm1.ann1.HFZH3W Arachis hypogaea HOM05D000575 ORTHO05D003840 8.1e-11 70.9 128 42.2
arahy.Tifrunner.gnm1.ann1.N0G8NP Arachis hypogaea HOM05D000575 ORTHO05D003840 8.1e-11 70.9 128 42.2
Ciclev10000656m.g Citrus clementina HOM05D000575 ORTHO05D003840 1.1e-10 70.5 99 47.5
Sed0016109 Sechium edule HOM05D000575 ORTHO05D003840 1.1e-10 70.5 113 43.4
Hund15497 Selenicereus undatus HOM05D000575 ORTHO05D003840 1.1e-10 70.5 144 38.9
AUR62038479 Chenopodium quinoa HOM05D000575 ORTHO05D003840 1.4e-10 70.1 147 38.8
EL10Ac6g14068 Beta vulgaris HOM05D000575 ORTHO05D003840 2.4e-10 69.3 131 42.7
CAN.G798.18 Capsicum annuum HOM05D000575 ORTHO05D003840 2.4e-10 69.3 115 40.9
TWI14G1178 Tripterygium wilfordii HOM05D000575 ORTHO05D003840 5.3e-10 68.2 127 40.2
CiPaw.05G049300 Carya illinoinensis HOM05D000575 ORTHO05D003840 6.9e-10 67.8 122 41.8
HanXRQChr16g0511981 Helianthus annuus HOM05D000575 ORTHO05D003840 6.9e-10 67.8 115 38.3
Sabra01G0163800 Salix brachista HOM05D000575 ORTHO05D003840 9.0e-10 67.4 114 40.4
CSS0001303 Camellia sinensis var. sinensis HOM05D000575 ORTHO05D003840 1.2e-09 67.0 102 43.1
Haze_01742 Corylus avellana HOM05D000575 ORTHO05D003840 1.5e-09 66.6 120 39.2
Ca_00063_v3 Cicer arietinum L. HOM05D000575 ORTHO05D003840 2.0e-09 66.2 118 42.4
Potri.001G212000 Populus trichocarpa HOM05D000575 ORTHO05D003840 2.0e-09 66.2 114 38.6
BcaB03g11894 Brassica carinata HOM05D000575 ORTHO05D003840 2.6e-09 65.9 104 45.2
Aqoxy6G00150 Aquilegia oxysepala HOM05D000575 ORTHO05D003840 3.4e-09 65.5 120 43.3
Nitab4.5_0001744g0050 Nicotiana tabacum HOM05D000575 ORTHO05D003840 3.4e-09 65.5 112 42.0
QL12p035455 Quercus lobata HOM05D000575 ORTHO05D003840 4.5e-09 65.1 104 45.2
Cpa.g.sc49.118 Carica papaya HOM05D000575 ORTHO05D003840 5.8e-09 64.7 103 45.6
Nitab4.5_0000816g0150 Nicotiana tabacum HOM05D000575 ORTHO05D003840 5.8e-09 64.7 106 43.4
CiPaw.06G145900 Carya illinoinensis HOM05D000575 ORTHO05D003840 7.6e-09 64.3 107 43.0
vmacro19882 Vaccinium macrocarpon HOM05D000575 ORTHO05D003840 7.6e-09 64.3 119 39.5
Cfa021315 Carpinus fangiana HOM05D000575 ORTHO05D003840 9.9e-09 63.9 120 37.5
Peaxi162Scf00152g01432 Petunia axillaris HOM05D000575 ORTHO05D003840 9.9e-09 63.9 114 38.6
A08p07930 Brassica napus HOM05D000575 ORTHO05D003840 1.3e-08 63.5 103 44.7
BraA08t32814Z Brassica rapa HOM05D000575 ORTHO05D003840 1.3e-08 63.5 103 44.7
Haze_00540 Corylus avellana HOM05D000575 ORTHO05D003840 1.3e-08 63.5 104 45.2
CARHR034990 Cardamine hirsuta HOM05D000575 ORTHO05D003840 2.2e-08 62.8 130 38.5
Lj5A254G83 Lonicera japonica HOM05D000575 ORTHO05D003840 2.2e-08 62.8 117 40.2
Nn1g08510 Nelumbo nucifera HOM05D000575 ORTHO05D003840 2.2e-08 62.8 103 44.7
THA.LOC104816961 Tarenaya hassleriana HOM05D000575 ORTHO05D003840 2.2e-08 62.8 109 44.0
TPR.G2077 Trifolium pratense HOM05D000575 ORTHO05D003840 2.9e-08 62.4 114 41.2
MELO3C019450.2 Cucumis melo HOM05D000575 ORTHO05D003840 4.9e-08 61.6 110 40.9
Thhalv10003888m.g Eutrema salsugineum HOM05D000575 ORTHO05D003840 4.9e-08 61.6 103 43.7
BcaC07g37494 Brassica carinata HOM05D000575 ORTHO05D003840 6.4e-08 61.2 104 43.3
Carub.0001s3373 Capsella rubella HOM05D000575 ORTHO05D003840 6.4e-08 61.2 108 44.4
THA.LOC104800174 Tarenaya hassleriana HOM05D000575 ORTHO05D003840 6.4e-08 61.2 109 42.2
BolC8t47813H Brassica oleracea HOM05D000575 ORTHO05D003840 1.1e-07 60.5 103 42.7
CsaV3_3G019180 Cucumis sativus L. HOM05D000575 ORTHO05D003840 1.1e-07 60.5 110 40.0
Lj6g0019184 Lotus japonicus HOM05D000575 ORTHO05D003840 1.4e-07 60.1 116 42.2
Rhsim05G0120100 Rhododendron simsii HOM05D000575 ORTHO05D019549 1.4e-07 60.1 123 38.2
TWI56G1074 Tripterygium wilfordii HOM05D000575 ORTHO05D003840 1.4e-07 60.1 125 36.8
Duzib132G0492 Durio zibethinus HOM05D000575 ORTHO05D003840 1.9e-07 59.7 100 46.0
Aa31LG6G9010 Aethionema arabicum HOM05D000575 ORTHO05D003840 2.4e-07 59.3 103 43.7
THA.LOC104806802 Tarenaya hassleriana HOM05D000575 ORTHO05D003840 2.4e-07 59.3 102 39.2
Cfa015949 Carpinus fangiana HOM05D000575 ORTHO05D003840 3.2e-07 58.9 104 45.2
ClCG05G009540 Citrullus lanatus HOM05D000575 ORTHO05D003840 3.2e-07 58.9 110 40.0
Gohir.D02G214200 Gossypium hirsutum HOM05D000575 ORTHO05D003840 3.2e-07 58.9 103 42.7
Gorai.005G242100 Gossypium raimondii HOM05D000575 ORTHO05D003840 3.2e-07 58.9 103 42.7
Lj9A303T72 Lonicera japonica HOM05D000575 ORTHO05D003840 3.2e-07 58.9 104 41.3
PGSC0003DMG400023799 Solanum tuberosum HOM05D000575 ORTHO05D003840 3.2e-07 58.9 108 38.9
DCAR_001825 Daucus carota HOM05D000575 ORTHO05D003840 4.2e-07 58.5 111 39.6
Lsat_1_v5_gn_5_105641 Lactuca sativa HOM05D000575 ORTHO05D003840 4.2e-07 58.5 116 39.7
Solyc01g104000.3 Solanum lycopersicum HOM05D000575 ORTHO05D003840 4.2e-07 58.5 104 40.4
BcaB04g17816 Brassica carinata HOM05D000575 ORTHO05D003840 5.5e-07 58.2 103 44.7
Aa31LG7G6010 Aethionema arabicum HOM05D000575 ORTHO05D003840 9.3e-07 57.4 103 42.7
Carub.0001s2156 Capsella rubella HOM05D000575 ORTHO05D003840 9.3e-07 57.4 108 43.5
Ah.02g127980 Amaranthus hybridus HOM05D000575 ORTHO05D003840 1.2e-06 57.0 129 37.2
Gohir.A03G193200 Gossypium hirsutum HOM05D000575 ORTHO05D003840 1.2e-06 57.0 103 44.7
Sopen01g046400 Solanum pennellii HOM05D000575 ORTHO05D003840 1.2e-06 57.0 104 40.4
CARHR022370 Cardamine hirsuta HOM05D000575 ORTHO05D003840 1.6e-06 56.6 105 42.9
Lsat_1_v5_gn_7_78961 Lactuca sativa HOM05D000575 ORTHO05D003840 1.6e-06 56.6 119 37.0
BcaB07g32221 Brassica carinata HOM05D000575 ORTHO05D003840 2.1e-06 56.2 109 43.1
Lalb_Chr20g0123571 Lupinus albus HOM05D000575 ORTHO05D003840 2.1e-06 56.2 117 38.5
Peaxi162Scf00011g00636 Petunia axillaris HOM05D000575 ORTHO05D003840 2.1e-06 56.2 114 39.5
Hma1.2p1_1197F.1_g266130 Hydrangea macrophylla HOM05D000575 ORTHO05D003840 2.7e-06 55.8 102 38.2
CANSAT25G2681 Cannabis sativa HOM05D000575 ORTHO05D003840 3.5e-06 55.5 106 38.7
TWI12G0303 Tripterygium wilfordii HOM05D000575 ORTHO05D003840 3.5e-06 55.5 124 34.7
C05p21040 Brassica napus HOM05D000575 ORTHO05D003840 4.6e-06 55.1 104 41.3
AT1G22020 Arabidopsis thaliana HOM05D000575 ORTHO05D003840 7.9e-06 54.3 107 41.1
HanXRQChr06g0181221 Helianthus annuus HOM05D000575 ORTHO05D003840 7.9e-06 54.3 112 35.7


User provided reference genes

Program Settings