Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.1e-133 479.9 248 100.0
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 6.6e-57 224.9 239 51.5
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 6.6e-57 224.9 273 48.7
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 8.1e-55 218.0 236 52.5
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.8e-54 216.9 238 49.2
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 4.0e-54 215.7 239 49.8
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 5.3e-54 215.3 236 49.2
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 5.3e-54 215.3 236 49.2
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 6.9e-54 214.9 258 46.5
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 2.0e-53 213.4 226 50.4
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 9.9e-53 211.1 259 46.7
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 1.3e-52 210.7 240 47.1
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 1.1e-51 207.6 236 47.9
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 1.1e-51 207.6 261 46.4
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 1.9e-51 206.8 208 51.4
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 2.4e-51 206.5 237 46.0
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 1.2e-50 204.1 239 45.2
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 1.6e-50 203.8 253 46.6
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 1.6e-50 203.8 260 45.0
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 4.6e-50 202.2 247 44.9
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 1.7e-49 200.3 231 49.8
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 2.3e-49 199.9 241 46.9
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 3.9e-49 199.1 258 44.2
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 5.1e-49 198.7 239 48.5
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 6.6e-49 198.4 219 48.9
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 6.6e-49 198.4 239 46.4
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 3.3e-48 196.1 257 46.3
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.3e-48 195.7 260 43.5
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 5.6e-48 195.3 198 51.0
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 7.3e-48 194.9 213 51.2
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 7.3e-48 194.9 252 46.4
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 9.6e-48 194.5 248 44.8
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 1.3e-47 194.1 229 48.0
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 2.1e-47 193.4 238 44.5
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 2.8e-47 193.0 229 47.2
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 2.8e-47 193.0 225 49.3
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 3.6e-47 192.6 235 45.1
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 4.8e-47 192.2 208 52.9
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 4.8e-47 192.2 249 46.6
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 4.8e-47 192.2 221 47.5
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.1e-46 191.0 230 49.1
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 4.0e-46 189.1 228 44.7
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 9.0e-46 188.0 235 45.1
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.2e-45 187.6 257 42.4
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 4.5e-45 185.7 216 48.1
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 5.8e-45 185.3 247 43.3
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 7.6e-45 184.9 260 42.7
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 1.7e-44 183.7 228 46.1
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 2.9e-44 183.0 236 43.2
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 3.8e-44 182.6 252 42.1
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 6.4e-44 181.8 245 43.3
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 6.4e-44 181.8 220 42.7
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 8.4e-44 181.4 260 42.3
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 1.1e-43 181.0 253 44.3
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 1.4e-43 180.6 231 43.7
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 7.1e-43 178.3 226 45.1
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.6e-42 177.2 221 45.2
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 1.6e-42 177.2 257 42.0
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 2.1e-42 176.8 235 41.7
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 2.7e-42 176.4 248 42.7
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 2.7e-42 176.4 253 41.9
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 4.6e-42 175.6 260 41.9
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.3e-41 174.1 260 41.5
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 2.3e-41 173.3 244 40.2
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 2.3e-41 173.3 249 40.6
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 3.0e-41 172.9 234 40.6
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 3.9e-41 172.6 234 40.6
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 8.7e-41 171.4 236 40.7
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.1e-40 171.0 225 44.0
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 1.1e-40 171.0 264 40.9
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 5.6e-40 168.7 237 41.4
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 1.3e-39 167.5 234 39.7
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 1.6e-39 167.2 251 40.6
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 1.6e-39 167.2 245 42.0
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 2.1e-39 166.8 207 43.5
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 2.8e-39 166.4 205 46.8
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 2.8e-39 166.4 233 42.5
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 1.1e-38 164.5 175 51.4
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 4.0e-38 162.5 233 41.6
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 6.9e-38 161.8 217 41.0
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 6.9e-38 161.8 200 46.0
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 9.0e-38 161.4 228 41.2
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 1.2e-37 161.0 222 42.8
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 2.0e-37 160.2 210 42.4
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 1.1e-35 154.5 241 39.8
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.5e-35 153.3 188 45.2
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 6.0e-34 148.7 207 42.0
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 1.9e-32 143.7 176 45.5
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 7.4e-32 141.7 174 46.6
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.1e-31 140.2 208 40.9
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.5e-29 132.5 199 40.2
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 4.9e-28 129.0 171 43.3
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 1.4e-27 127.5 175 41.7
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 7.1e-27 125.2 226 36.3
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 3.0e-25 119.8 133 48.9
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 4.1e-14 82.8 105 42.9
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.0e-09 68.2 85 44.7
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 1.7e-07 60.8 193 30.1


User provided reference genes

Program Settings