Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 0.0e+00 1274.6 637 100.0
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 2.3e-295 1018.5 639 77.5
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 3.3e-294 1014.6 637 77.6
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 7.4e-286 986.9 634 75.9
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 5.0e-282 974.2 635 74.5
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 4.2e-281 971.1 637 74.7
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 2.8e-277 958.4 634 74.1
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 4.8e-277 957.6 638 73.2
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 4.8e-277 957.6 638 73.2
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.1e-276 956.4 633 72.7
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.1e-276 956.4 679 69.7
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 2.4e-276 955.3 638 73.2
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 5.0e-274 947.6 635 72.9
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 8.5e-274 946.8 635 71.8
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 3.2e-273 944.9 634 73.3
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 1.2e-272 943.0 636 72.6
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 7.4e-270 933.7 633 72.5
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 2.8e-269 931.8 600 74.3
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 6.3e-269 930.6 634 70.3
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 5.3e-268 927.5 617 73.6
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.5e-267 926.0 632 72.0
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 7.2e-265 917.1 637 71.1
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.6e-264 916.0 636 70.3
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 2.1e-264 915.6 638 69.3
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 2.1e-264 915.6 639 70.1
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.7e-264 914.4 634 71.6
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 6.1e-264 914.1 633 69.8
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 5.7e-262 907.5 661 68.5
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.2e-261 905.6 611 72.0
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 3.7e-261 904.8 635 69.9
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 3.7e-261 904.8 634 68.8
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 4.8e-261 904.4 634 68.8
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 4.8e-261 904.4 635 69.4
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 4.8e-261 904.4 635 70.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 8.2e-261 903.7 635 69.4
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 8.2e-261 903.7 634 68.8
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 1.1e-260 903.3 633 69.5
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.8e-260 902.5 631 70.0
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 4.1e-260 901.4 635 69.1
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 5.3e-260 901.0 634 68.6
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 7.0e-260 900.6 631 69.6
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 7.0e-260 900.6 633 69.5
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 9.1e-260 900.2 631 68.8
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.6e-259 899.4 635 70.1
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 5.9e-259 897.5 635 70.1
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.3e-258 896.3 631 68.8
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 5.0e-258 894.4 636 67.3
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.5e-257 892.9 639 68.5
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.9e-257 892.5 636 67.0
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 9.4e-257 890.2 633 67.6
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 9.4e-257 890.2 635 69.3
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 8.0e-256 887.1 636 67.9
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.4e-255 886.3 635 67.9
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.3e-255 885.6 636 68.7
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 8.8e-255 883.6 636 68.4
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 1.2e-254 883.2 636 67.1
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.7e-253 879.4 670 66.7
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 8.3e-253 877.1 646 67.5
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 1.1e-252 876.7 577 73.7
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.4e-252 875.5 639 67.6
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.0e-250 870.2 637 66.1
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.7e-250 869.4 610 68.4
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.7e-250 869.4 595 71.3
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.5e-246 856.3 638 65.4
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 3.4e-246 855.1 639 67.0
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 4.8e-245 851.3 599 69.8
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 8.3e-245 850.5 637 67.8
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 3.1e-244 848.6 632 67.4
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 5.4e-244 847.8 635 66.9
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 2.7e-243 845.5 629 66.8
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 3.3e-241 838.6 633 65.4
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 3.6e-240 835.1 625 66.4
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.4e-239 833.2 596 67.3
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 2.3e-239 832.4 637 65.0
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 6.8e-239 830.9 637 64.4
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 6.3e-237 824.3 633 64.8
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 7.0e-236 820.8 642 63.4
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 2.0e-235 819.3 637 63.1
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.7e-235 818.9 579 68.2
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 5.9e-235 817.8 637 63.3
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 2.9e-234 815.5 636 63.1
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 5.0e-234 814.7 644 63.4
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 7.3e-233 810.8 589 66.4
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.0e-231 807.0 639 62.8
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.0e-231 807.0 639 62.8
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 2.6e-230 802.4 631 64.8
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 7.3e-225 784.3 634 60.3
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.6e-219 766.5 573 65.4
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 3.5e-211 738.8 636 58.3
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 4.6e-211 738.4 610 59.8
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.5e-201 706.1 494 69.2
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.1e-199 700.7 456 74.8
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 2.7e-195 686.0 446 74.7
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.8e-191 673.3 416 77.2
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 9.3e-188 661.0 637 52.3
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 5.6e-185 651.7 451 69.2
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.8e-178 630.2 644 49.7
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 2.0e-166 590.1 401 71.6
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.3e-161 572.4 399 70.7
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 4.8e-160 568.9 603 48.3
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 5.7e-153 545.4 640 44.8
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 3.5e-150 536.2 420 64.8
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 5.4e-127 459.1 426 59.4
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 4.4e-121 439.5 611 42.6
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 5.6e-108 396.0 763 33.2
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 7.6e-97 359.0 277 65.7
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 3.4e-49 200.7 152 65.1
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 1.2e-46 192.2 179 55.9
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 2.7e-46 191.0 185 52.4
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 7.2e-39 166.4 163 55.2
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 4.8e-35 153.7 219 39.7
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.5e-31 142.1 82 78.0
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 2.7e-17 94.7 94 57.4
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 7.7e-17 93.2 90 52.2
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 7.2e-15 86.7 81 51.9
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 5.9e-09 67.0 41 75.6
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 2.9e-08 64.7 39 69.2
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 2.5e-07 61.6 47 61.7


User provided reference genes

Program Settings