Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0626G007 Amborella trichopoda HOM05D003767 ORTHO05D004507 4.8e-134 481.1 230 100.0
CiPaw.08G167300 Carya illinoinensis HOM05D003767 ORTHO05D004507 2.1e-97 359.4 216 78.2
TAR365G0614 Trochodendron aralioides HOM05D003767 ORTHO05D004507 2.7e-97 359.0 216 79.2
A06p37610 Brassica napus HOM05D003767 ORTHO05D004507 2.3e-96 355.9 213 78.4
BraA06t26680Z Brassica rapa HOM05D003767 ORTHO05D004507 2.3e-96 355.9 213 78.4
BcaNung02467 Brassica carinata HOM05D003767 ORTHO05D004507 5.1e-96 354.8 213 77.9
C07p40700 Brassica napus HOM05D003767 ORTHO05D004507 5.1e-96 354.8 213 77.9
BolC7t44598H Brassica oleracea HOM05D003767 ORTHO05D004507 5.1e-96 354.8 213 77.9
GSVIVG01022056001 Vitis vinifera HOM05D003767 ORTHO05D004507 5.1e-96 354.8 216 78.2
CANSAT54G0870 Cannabis sativa HOM05D003767 ORTHO05D004507 1.5e-95 353.2 212 79.7
QL03p004251 Quercus lobata HOM05D003767 ORTHO05D004507 2.0e-95 352.8 215 76.7
BcaNung04364 Brassica carinata HOM05D003767 ORTHO05D004507 2.6e-95 352.4 212 77.8
Sp2g20600 Schrenkiella parvula HOM05D003767 ORTHO05D004507 2.6e-95 352.4 216 77.3
MD04G1210100 Malus domestica HOM05D003767 ORTHO05D004507 3.3e-95 352.1 216 76.4
Prupe.6G331000 Prunus persica HOM05D003767 ORTHO05D004507 3.3e-95 352.1 216 76.4
CARHR185970 Cardamine hirsuta HOM05D003767 ORTHO05D004507 4.4e-95 351.7 213 77.9
Thhalv10003956m.g Eutrema salsugineum HOM05D003767 ORTHO05D004507 4.4e-95 351.7 216 77.3
FAN09G3025 Fragaria x ananassa HOM05D003767 ORTHO05D004507 4.4e-95 351.7 222 73.4
Potri.013G026800 Populus trichocarpa HOM05D003767 ORTHO05D004507 4.4e-95 351.7 216 76.4
Duzib147G0043 Durio zibethinus HOM05D003767 ORTHO05D004507 5.7e-95 351.3 212 77.8
Cfa006539 Carpinus fangiana HOM05D003767 ORTHO05D004507 7.4e-95 350.9 216 77.8
BcaB04g19665 Brassica carinata HOM05D003767 ORTHO05D004507 1.3e-94 350.1 216 75.5
BcaC04g23683 Brassica carinata HOM05D003767 ORTHO05D004507 2.8e-94 349.0 216 75.0
BolC9t53499H Brassica oleracea HOM05D003767 ORTHO05D004507 2.8e-94 349.0 216 75.0
RcHm_v2.0_Chr3g0453991 Rosa chinensis HOM05D003767 ORTHO05D004507 2.8e-94 349.0 216 75.0
arahy.Tifrunner.gnm1.ann1.1T3PYK Arachis hypogaea HOM05D003767 ORTHO05D004507 4.8e-94 348.2 216 75.5
Rhsim07G0179200 Rhododendron simsii HOM05D003767 ORTHO05D004507 6.3e-94 347.8 216 75.0
Atru.chr2.496 Acer truncatum HOM05D003767 ORTHO05D004507 8.2e-94 347.4 216 76.9
arahy.Tifrunner.gnm1.ann1.RYM43V Arachis hypogaea HOM05D003767 ORTHO05D004507 8.2e-94 347.4 216 75.5
BraA09t36163Z Brassica rapa HOM05D003767 ORTHO05D004507 8.2e-94 347.4 216 75.0
FvH4_6g05260 Fragaria vesca HOM05D003767 ORTHO05D004507 1.1e-93 347.1 216 74.5
FAN14G0860 Fragaria x ananassa HOM05D003767 ORTHO05D004507 1.1e-93 347.1 216 74.5
FAN14G3644 Fragaria x ananassa HOM05D003767 ORTHO05D004507 1.1e-93 347.1 216 74.5
A09p05240 Brassica napus HOM05D003767 ORTHO05D004507 1.4e-93 346.7 212 75.9
MD12G1224500 Malus domestica HOM05D003767 ORTHO05D004507 1.8e-93 346.3 216 75.9
Manes.08G123500 Manihot esculenta HOM05D003767 ORTHO05D004507 1.8e-93 346.3 212 75.5
Potri.005G038100 Populus trichocarpa HOM05D003767 ORTHO05D004507 1.8e-93 346.3 216 75.9
Ah.06g190170 Amaranthus hybridus HOM05D003767 ORTHO05D004507 2.4e-93 345.9 216 75.0
C09p05700 Brassica napus HOM05D003767 ORTHO05D004507 2.4e-93 345.9 216 74.5
COL.COLO4_12128 Corchorus olitorius HOM05D003767 ORTHO05D004507 2.4e-93 345.9 212 76.4
Eucgr.H04452 Eucalyptus grandis HOM05D003767 ORTHO05D004507 3.1e-93 345.5 216 75.0
Glyma.19G237900 Glycine max HOM05D003767 ORTHO05D004507 3.1e-93 345.5 212 76.9
PSO832G1867 Papaver somniferum HOM05D003767 ORTHO05D004507 3.1e-93 345.5 216 76.9
AL6G39640 Arabidopsis lyrata HOM05D003767 ORTHO05D004507 4.1e-93 345.1 216 74.5
RhsimUnG0080300 Rhododendron simsii HOM05D003767 ORTHO05D004507 4.1e-93 345.1 216 74.5
AUR62000859 Chenopodium quinoa HOM05D003767 ORTHO05D004507 5.3e-93 344.7 212 75.9
Aa31LG11G9150 Aethionema arabicum HOM05D003767 ORTHO05D004507 7.0e-93 344.4 212 76.4
Gohir.A11G224810 Gossypium hirsutum HOM05D003767 ORTHO05D004507 7.0e-93 344.4 216 75.9
PGR031G1040 Punica granatum HOM05D003767 ORTHO05D004507 7.0e-93 344.4 216 74.1
THA.LOC104821704 Tarenaya hassleriana HOM05D003767 ORTHO05D004507 7.0e-93 344.4 216 75.5
vmacro05036 Vaccinium macrocarpon HOM05D003767 ORTHO05D004507 7.0e-93 344.4 216 75.5
AUR62005115 Chenopodium quinoa HOM05D003767 ORTHO05D004507 9.1e-93 344.0 212 75.5
Carub.0006s2517 Capsella rubella HOM05D003767 ORTHO05D004507 1.2e-92 343.6 226 70.8
FAN05G2944 Fragaria x ananassa HOM05D003767 ORTHO05D004507 1.2e-92 343.6 212 75.0
Lalb_Chr15g0077051 Lupinus albus HOM05D003767 ORTHO05D004507 1.2e-92 343.6 212 76.9
TWI56G0745 Tripterygium wilfordii HOM05D003767 ORTHO05D004507 1.2e-92 343.6 216 75.9
Sabra05G0038000 Salix brachista HOM05D003767 ORTHO05D004507 1.5e-92 343.2 216 75.0
Gorai.003G066300 Gossypium raimondii HOM05D003767 ORTHO05D004507 2.0e-92 342.8 216 75.5
Actinidia23606 Actinidia chinensis HOM05D003767 ORTHO05D004507 2.6e-92 342.4 216 74.5
Os11g0642800 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 3.5e-92 342.0 211 76.8
PSO210G1178 Papaver somniferum HOM05D003767 ORTHO05D004507 4.5e-92 341.7 216 76.4
Sed0026847 Sechium edule HOM05D003767 ORTHO05D004507 4.5e-92 341.7 212 76.4
Zm00001eb137820 Zea mays HOM05D003767 ORTHO05D004507 4.5e-92 341.7 215 75.8
AT5G27380 Arabidopsis thaliana HOM05D003767 ORTHO05D004507 5.9e-92 341.3 224 72.3
CSS0007130 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 5.9e-92 341.3 216 75.5
Hund07038 Selenicereus undatus HOM05D003767 ORTHO05D004507 5.9e-92 341.3 214 74.3
Thecc.02G212900 Theobroma cacao HOM05D003767 ORTHO05D004507 5.9e-92 341.3 212 75.5
Cc02_g32590 Coffea canephora HOM05D003767 ORTHO05D004507 1.3e-91 340.1 216 74.5
Hma1.2p1_0666F.1_g199390 Hydrangea macrophylla HOM05D003767 ORTHO05D004507 1.3e-91 340.1 216 75.5
Lj9A681G36 Lonicera japonica HOM05D003767 ORTHO05D004507 1.3e-91 340.1 216 75.0
MELO3C015345.2 Cucumis melo HOM05D003767 ORTHO05D004507 1.7e-91 339.7 212 76.4
Glyma.19G237800 Glycine max HOM05D003767 ORTHO05D004507 1.7e-91 339.7 212 74.5
DCAR_002932 Daucus carota HOM05D003767 ORTHO05D004507 2.2e-91 339.3 212 75.5
Gohir.D11G232600 Gossypium hirsutum HOM05D003767 ORTHO05D004507 2.2e-91 339.3 216 75.0
Sc09g0003380 Simmondsia chinensis HOM05D003767 ORTHO05D004507 2.2e-91 339.3 211 74.4
FAN05G1904 Fragaria x ananassa HOM05D003767 ORTHO05D004507 3.8e-91 338.6 219 72.1
Aqoxy2G03198 Aquilegia oxysepala HOM05D003767 ORTHO05D004507 5.0e-91 338.2 215 76.7
Manes.09G162900 Manihot esculenta HOM05D003767 ORTHO05D004507 8.5e-91 337.4 210 74.8
Os12g0528400 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 1.1e-90 337.0 211 75.4
TPR.G33164 Trifolium pratense HOM05D003767 ORTHO05D004507 1.1e-90 337.0 213 73.7
Aqoxy5G00559 Aquilegia oxysepala HOM05D003767 ORTHO05D004507 1.4e-90 336.7 216 75.9
Lalb_Chr18g0045501 Lupinus albus HOM05D003767 ORTHO05D004507 1.4e-90 336.7 212 75.0
VMungo0540G2084 Vigna mungo HOM05D003767 ORTHO05D004507 2.5e-90 335.9 214 74.3
Ciclev10000728m.g Citrus clementina HOM05D003767 ORTHO05D004507 4.2e-90 335.1 216 74.5
Medtr7g113890 Medicago truncatula HOM05D003767 ORTHO05D004507 5.5e-90 334.7 212 74.5
PGSC0003DMG400028599 Solanum tuberosum HOM05D003767 ORTHO05D004507 5.5e-90 334.7 212 75.0
Sopen01g042160 Solanum pennellii HOM05D003767 ORTHO05D004507 7.2e-90 334.3 212 75.0
EL10Ac4g09299 Beta vulgaris HOM05D003767 ORTHO05D004507 9.4e-90 334.0 210 74.3
Ca_09376_v3 Cicer arietinum L. HOM05D003767 ORTHO05D004507 9.4e-90 334.0 216 73.6
Phvul.006G094700 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 1.2e-89 333.6 213 74.2
Psat3g009360 Pisum sativum HOM05D003767 ORTHO05D004507 2.1e-89 332.8 212 74.1
Solyc01g098610.4 Solanum lycopersicum HOM05D003767 ORTHO05D004507 2.7e-89 332.4 212 74.5
DCAR_005538 Daucus carota HOM05D003767 ORTHO05D004507 3.6e-89 332.0 212 74.5
DCAR_029443 Daucus carota HOM05D003767 ORTHO05D004507 8.0e-89 330.9 212 73.6
HanXRQChr14g0446461 Helianthus annuus HOM05D003767 ORTHO05D004507 8.0e-89 330.9 212 73.6
Oeu027914.1 Olea europaea HOM05D003767 ORTHO05D004507 8.0e-89 330.9 212 72.6
Phvul.006G094600 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 1.0e-88 330.5 212 72.2
Cpa.g.sc48.5 Carica papaya HOM05D003767 ORTHO05D004507 1.4e-88 330.1 216 72.7
Lj1g0000488 Lotus japonicus HOM05D003767 ORTHO05D004507 1.8e-88 329.7 212 69.3
Lj1g0009738 Lotus japonicus HOM05D003767 ORTHO05D004507 2.3e-88 329.3 212 71.7
Peaxi162Scf00434g00336 Petunia axillaris HOM05D003767 ORTHO05D004507 2.3e-88 329.3 212 74.1
Migut.F01584 Erythranthe guttata HOM05D003767 ORTHO05D004507 5.2e-88 328.2 212 74.1
ECA238G2357 Erigeron canadensis HOM05D003767 ORTHO05D004507 6.7e-88 327.8 212 73.1
HanXRQChr10g0295061 Helianthus annuus HOM05D003767 ORTHO05D004507 1.1e-87 327.0 212 72.6
CAN.G1134.12 Capsicum annuum HOM05D003767 ORTHO05D004507 2.0e-87 326.2 212 72.6
HPP92_001826 Vanilla planifolia HOM05D003767 ORTHO05D004507 2.6e-87 325.9 212 72.6
Zm00001eb115490 Zea mays HOM05D003767 ORTHO05D004507 2.6e-87 325.9 211 74.4
MBI17_g18114_MAGBIO Magnolia biondii HOM05D003767 ORTHO05D004507 3.3e-87 325.5 269 63.6
Lsat_1_v5_gn_2_64341 Lactuca sativa HOM05D003767 ORTHO05D004507 4.4e-87 325.1 209 73.7
MSTRG.8108 Avicennia marina HOM05D003767 ORTHO05D004507 7.4e-87 324.3 212 72.6
Nitab4.5_0001423g0150 Nicotiana tabacum HOM05D003767 ORTHO05D004507 9.7e-87 323.9 210 74.8
Nitab4.5_0004940g0030 Nicotiana tabacum HOM05D003767 ORTHO05D004507 6.3e-86 321.2 212 72.6
SGA_v2.0_scaffold13G06464 Striga asiatica HOM05D003767 ORTHO05D004507 6.3e-86 321.2 213 71.8
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 8.2e-86 320.9 212 70.8
Medtr7g113880 Medicago truncatula HOM05D003767 ORTHO05D004507 7.0e-85 317.8 212 68.9
Ca_09375_v3 Cicer arietinum L. HOM05D003767 ORTHO05D004507 9.1e-85 317.4 212 68.4
SalBow6G1775 Salvia bowleyana HOM05D003767 ORTHO05D003551 1.2e-84 317.0 200 73.0
CSS0005723 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 4.5e-84 315.1 209 71.3
CSS0020414 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 4.5e-84 315.1 209 70.8
Psat3g009920 Pisum sativum HOM05D003767 ORTHO05D004507 5.9e-84 314.7 212 67.9
TPR.G33204 Trifolium pratense HOM05D003767 ORTHO05D004507 7.7e-84 314.3 212 68.4
Glyma.03G240600 Glycine max HOM05D003767 ORTHO05D004507 3.8e-83 312.0 213 67.6
ECA238G1346 Erigeron canadensis HOM05D003767 ORTHO05D004507 6.5e-83 311.2 212 69.3
Phvul.006G094500 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 6.5e-83 311.2 212 67.9
Glyma.19G237700 Glycine max HOM05D003767 ORTHO05D004507 1.1e-82 310.5 212 67.5
Os12g0263000 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 1.1e-82 310.5 212 67.9
Actinidia05727 Actinidia chinensis HOM05D003767 ORTHO05D004507 1.6e-81 306.6 193 75.6
ClCG03G016760 Citrullus lanatus HOM05D003767 ORTHO05D004507 1.6e-81 306.6 193 77.7
VMungo0540G0577 Vigna mungo HOM05D003767 ORTHO05D004507 1.6e-81 306.6 212 66.5
SMO271G0026 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 6.3e-78 294.7 215 64.2
Mapoly0002s0041 Marchantia polymorpha HOM05D003767 ORTHO05D004507 2.2e-75 286.2 215 63.3
Nn1g08367 Nelumbo nucifera HOM05D003767 ORTHO05D004507 8.0e-73 277.7 168 78.0
Pp3c1_36280 Physcomitrium patens HOM05D003767 ORTHO05D004507 4.1e-69 265.4 219 59.4
Cre17.g708800 Chlamydomonas reinhardtii HOM05D003767 ORTHO05D004507 4.9e-62 241.9 227 53.3
MCO07G639 Micromonas commoda HOM05D003767 ORTHO05D004507 5.2e-56 221.9 218 50.9
PRCOL_00004575 Prasinoderma coloniale HOM05D003767 ORTHO05D004507 7.8e-52 208.0 213 52.6
SMO304G0030 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 1.5e-47 193.7 199 52.8
Nn1g02104 Nelumbo nucifera HOM05D003767 ORTHO05D004507 1.1e-42 177.6 126 64.3
CDE02G2107 Ceratophyllum demersum HOM05D000488 ORTHO05D000347 8.1e-41 171.4 124 65.3
Eucgr.H04446 Eucalyptus grandis HOM05D003767 ORTHO05D004507 5.2e-40 168.7 114 70.2
Cfa024552 Carpinus fangiana HOM05D003767 ORTHO05D004507 2.0e-39 166.8 222 41.9
CBR_g15993 Chara braunii HOM05D003767 ORTHO05D004507 7.5e-39 164.9 158 54.4
Actinidia24503 Actinidia chinensis HOM05D003767 ORTHO05D004507 3.0e-35 152.9 135 58.5
CAN.G299.1 Capsicum annuum HOM05D003767 ORTHO05D004507 2.2e-30 136.7 91 68.1
TAR636G2499 Trochodendron aralioides HOM05D003767 ORTHO05D004507 2.1e-28 130.2 77 83.1
TAR636G1925 Trochodendron aralioides HOM05D003767 ORTHO05D004507 3.5e-28 129.4 76 77.6
CSS0000499 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 6.9e-24 115.2 64 82.8
CsaV3_1G039210 Cucumis sativus L. HOM05D003767 ORTHO05D004507 5.8e-23 112.1 59 84.7
RcHm_v2.0_Chr2g0172961 Rosa chinensis HOM05D003767 ORTHO05D004507 3.8e-22 109.4 62 80.6
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 1.4e-21 107.5 65 73.8
CAN.G73.7 Capsicum annuum HOM05D003767 ORTHO05D000047 1.8e-16 90.5 55 70.9
SEGI_31082 Sequoiadendron giganteum HOM05D003767 ORTHO05D004507 1.3e-14 84.3 51 70.6
C05p33690 Brassica napus HOM05D003767 ORTHO05D041347 1.7e-14 84.0 54 72.2
BolC5t32099H Brassica oleracea HOM05D003767 ORTHO05D041347 1.7e-14 84.0 54 72.2
SMO304G0024 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 6.0e-12 75.5 151 35.8
RcHm_v2.0_Chr2g0172951 Rosa chinensis HOM05D003767 ORTHO05D004507 3.3e-10 69.7 51 58.8
SMO164G0207 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 1.3e-09 67.8 112 37.5
SMO164G0195 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 4.0e-08 62.8 164 28.7
Psat1g075760 Pisum sativum HOM05D003767 ORTHO05D004507 2.6e-07 60.1 39 66.7


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