Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 5.1e-298 1026.9 501 100.0
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 3.8e-213 745.0 490 74.9
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 1.1e-207 726.9 491 71.3
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 6.0e-206 721.1 500 71.8
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.3e-205 719.9 491 70.7
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 3.9e-205 718.4 491 71.5
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 8.6e-205 717.2 491 71.3
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 3.3e-204 715.3 491 70.5
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 2.1e-203 712.6 491 69.9
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 8.0e-203 710.7 494 71.1
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 1.2e-201 706.8 494 71.1
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.5e-201 706.4 491 69.9
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 9.8e-201 703.7 499 69.9
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 2.2e-200 702.6 493 69.8
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 1.4e-199 699.9 495 71.1
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 1.9e-199 699.5 492 68.9
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 2.4e-199 699.1 491 69.0
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 1.2e-198 696.8 498 69.3
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 2.7e-198 695.7 515 66.8
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 4.6e-198 694.9 491 69.7
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 6.0e-198 694.5 491 70.3
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 1.0e-197 693.7 494 70.0
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 2.3e-197 692.6 501 69.5
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 6.6e-197 691.0 491 68.6
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 5.6e-196 688.0 491 68.0
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 3.6e-195 685.3 504 68.1
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 6.8e-194 681.0 491 67.8
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 2.0e-193 679.5 491 67.2
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 3.2e-191 672.2 493 66.5
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 1.6e-190 669.8 495 66.7
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 2.7e-190 669.1 493 66.9
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.3e-189 666.8 493 68.0
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 1.7e-189 666.4 491 67.2
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 2.3e-189 666.0 575 60.7
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 1.9e-188 662.9 491 67.4
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 5.6e-188 661.4 499 65.9
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.1e-187 659.4 493 67.3
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 4.7e-187 658.3 491 66.6
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.4e-186 656.0 494 66.8
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 2.4e-186 656.0 449 70.8
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 3.1e-186 655.6 491 66.2
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 5.2e-186 654.8 494 65.8
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 5.2e-186 654.8 472 68.4
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.5e-185 653.3 500 67.0
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.6e-185 652.5 498 66.3
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 4.4e-185 651.7 500 67.0
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 2.2e-184 649.4 495 66.9
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 6.4e-184 647.9 498 64.9
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 8.4e-184 647.5 494 66.0
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.9e-183 646.4 492 65.9
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.4e-183 646.0 500 66.6
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 2.4e-183 646.0 491 65.2
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 5.4e-183 644.8 494 65.4
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 7.1e-183 644.4 494 65.2
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 1.2e-182 643.7 494 65.2
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.2e-182 643.7 494 65.2
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.2e-182 643.7 473 67.4
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 2.1e-182 642.9 494 66.2
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 2.5e-180 636.0 499 63.9
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 3.3e-180 635.6 492 65.4
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 4.3e-180 635.2 520 61.3
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 7.3e-180 634.4 503 64.6
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 9.6e-180 634.0 494 64.4
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 3.6e-179 632.1 494 64.8
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 1.2e-177 627.1 490 62.9
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 3.4e-177 625.5 497 63.6
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 9.9e-177 624.0 500 63.0
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 9.3e-175 617.5 492 62.8
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 6.6e-173 611.3 526 60.1
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 1.9e-172 609.8 442 69.7
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 5.6e-172 608.2 490 62.4
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.1e-170 604.0 490 61.6
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 6.9e-170 601.3 582 56.7
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.6e-169 599.4 557 55.5
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.6e-169 599.4 557 55.5
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 2.9e-168 595.9 494 60.9
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 3.8e-168 595.5 455 67.9
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 1.8e-165 586.6 448 66.5
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 7.4e-164 581.3 501 60.3
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.8e-162 576.6 420 67.4
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 9.9e-161 570.9 413 68.3
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.9e-159 566.6 449 61.2
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 7.9e-158 561.2 554 55.4
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.3e-157 559.7 493 59.6
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 2.5e-156 556.2 506 56.1
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 6.9e-154 548.1 418 66.5
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 3.0e-149 532.7 547 52.8
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.1e-146 522.3 538 52.6
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 2.4e-138 496.5 419 60.9
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 7.9e-134 481.5 499 50.7
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 7.9e-134 481.5 449 56.1
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 1.8e-133 480.3 499 52.1
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 7.7e-129 464.9 348 67.5
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 2.2e-115 420.2 921 32.7
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 4.8e-115 419.1 494 49.0
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.4e-114 417.5 374 58.6
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.9e-112 409.8 843 33.5
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 2.7e-110 403.3 297 68.0
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.8e-107 393.3 805 33.9
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 5.4e-106 389.0 912 31.5
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.2e-105 387.9 851 32.5
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.8e-101 374.0 315 60.3
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 3.3e-95 353.2 237 73.0
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 1.7e-91 340.9 255 64.7
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 6.4e-91 339.0 254 65.4
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.1e-90 338.2 262 63.7
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 7.8e-89 332.0 267 63.3
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.5e-84 317.8 261 61.7
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 8.9e-77 292.0 196 68.4
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 3.2e-74 283.5 197 71.1
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 1.2e-70 271.6 282 51.8
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 3.9e-64 250.0 175 70.9
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 4.0e-61 240.0 277 49.1
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 3.7e-46 190.3 129 74.4
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 1.4e-26 125.2 600 22.7
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 8.8e-24 115.9 105 55.2
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.7e-22 111.7 76 67.1
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 2.9e-19 100.9 103 53.4
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 2.7e-17 94.4 79 59.5
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 9.1e-13 79.3 199 27.1
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.6e-12 77.8 65 55.4
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 1.4e-08 65.5 53 62.3
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 3.0e-08 64.3 52 63.5
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 3.3e-07 60.8 33 81.8
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.3e-06 58.9 40 67.5


User provided reference genes

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